RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 PRLP01236 227 aa16.31■□□□□ 0.2
HERC1-207ENST00000560316 EBLN1P0CF75 366 aa16.31■□□□□ 0.2
HERC1-207ENST00000560316 BRAFP15056 766 aa16.31■□□□□ 0.2
HERC1-207ENST00000560316 LPOP22079 712 aaPredicted RBP16.31■□□□□ 0.2
HERC1-207ENST00000560316 RPL10P27635 214 aaKnown RBP16.31■□□□□ 0.2
HERC1-207ENST00000560316 ZNF135P52742 658 aaPredicted RBP16.31■□□□□ 0.2
HERC1-207ENST00000560316 INSCQ1MX18 579 aa16.31■□□□□ 0.2
HERC1-207ENST00000560316 SMTNL2Q2TAL5 461 aa16.31■□□□□ 0.2
HERC1-207ENST00000560316 CYB5D1Q6P9G0 228 aa16.31■□□□□ 0.2
HERC1-207ENST00000560316 POLNQ7Z5Q5 900 aa16.31■□□□□ 0.2
HERC1-207ENST00000560316 TEX26Q8N6G2 289 aa16.31■□□□□ 0.2
HERC1-207ENST00000560316 TTC13Q8NBP0 860 aa16.31■□□□□ 0.2
HERC1-207ENST00000560316 LPCAT1Q8NF37 534 aa16.31■□□□□ 0.2
HERC1-207ENST00000560316 ADAMTS17Q8TE56 1095 aa16.31■□□□□ 0.2
HERC1-207ENST00000560316 MR1Q95460 341 aa16.31■□□□□ 0.2
HERC1-207ENST00000560316 SLC41A2Q96JW4 573 aa16.31■□□□□ 0.2
HERC1-207ENST00000560316 RANBP9Q96S59 729 aa16.31■□□□□ 0.2
HERC1-207ENST00000560316 TDRD1Q9BXT4 1180 aaKnown RBP16.31■□□□□ 0.2
HERC1-207ENST00000560316 SLC40A1Q9NP59 571 aa16.31■□□□□ 0.2
HERC1-207ENST00000560316 ASF1BQ9NVP2 202 aa16.31■□□□□ 0.2
HERC1-207ENST00000560316 EPHA6Q9UF33 1036 aa16.31■□□□□ 0.2
HERC1-207ENST00000560316 DNPEPQ9ULA0 475 aa16.31■□□□□ 0.2
HERC1-207ENST00000560316 POLQO75417 2590 aa16.3■□□□□ 0.2
HERC1-207ENST00000560316 TMEM191CA6NGB0 347 aa16.3■□□□□ 0.2
HERC1-207ENST00000560316 MTA2O94776 668 aa16.3■□□□□ 0.2
HERC1-207ENST00000560316 TMEM63AO94886 807 aa16.3■□□□□ 0.2
HERC1-207ENST00000560316 PRF1P14222 555 aa16.3■□□□□ 0.2
HERC1-207ENST00000560316 IL1R2P27930 398 aa16.3■□□□□ 0.2
HERC1-207ENST00000560316 ARL4AP40617 200 aa16.3■□□□□ 0.2
HERC1-207ENST00000560316 DRG2P55039 364 aaKnown RBP16.3■□□□□ 0.2
HERC1-207ENST00000560316 PDE1BQ01064 536 aa16.3■□□□□ 0.2
HERC1-207ENST00000560316 GPS2Q13227 327 aa16.3■□□□□ 0.2
HERC1-207ENST00000560316 RAPSNQ13702 412 aa16.3■□□□□ 0.2
HERC1-207ENST00000560316 KRT31Q15323 416 aa16.3■□□□□ 0.2
HERC1-207ENST00000560316 PLEKHN1Q494U1 663 aaPredicted RBP16.3■□□□□ 0.2
HERC1-207ENST00000560316 ZRANB3Q5FWF4 1079 aa16.3■□□□□ 0.2
HERC1-207ENST00000560316 FKBP15Q5T1M5 1219 aa16.3■□□□□ 0.2
HERC1-207ENST00000560316 PLEKHA7Q6IQ23 1121 aa16.3■□□□□ 0.2
HERC1-207ENST00000560316 ADGRG6Q86SQ4 1221 aa16.3■□□□□ 0.2
HERC1-207ENST00000560316 RAVER1Q8IY67 606 aaKnown RBP16.3■□□□□ 0.2
HERC1-207ENST00000560316 CISD2Q8N5K1 135 aaKnown RBP16.3■□□□□ 0.2
HERC1-207ENST00000560316 HSPH1Q92598 858 aa16.3■□□□□ 0.2
HERC1-207ENST00000560316 PCMTD1Q96MG8 357 aaPredicted RBP16.3■□□□□ 0.2
HERC1-207ENST00000560316 FCRL4Q96PJ5 515 aa16.3■□□□□ 0.2
HERC1-207ENST00000560316 CSPG4P5Q96PW8 444 aa16.3■□□□□ 0.2
HERC1-207ENST00000560316 POLR1EQ9GZS1 481 aaKnown RBP16.3■□□□□ 0.2
HERC1-207ENST00000560316 POT1Q9NUX5 634 aa16.3■□□□□ 0.2
HERC1-207ENST00000560316 PKD2L2Q9NZM6 624 aa16.3■□□□□ 0.2
HERC1-207ENST00000560316 TRIM10Q9UDY6 481 aa16.3■□□□□ 0.2
HERC1-207ENST00000560316 TTLL3Q9Y4R7 772 aa16.3■□□□□ 0.2
HERC1-207ENST00000560316 SSU72P8A0A1W2PR75 194 aa16.29■□□□□ 0.2
HERC1-207ENST00000560316 ANKUB1A6NFN9 424 aa16.29■□□□□ 0.2
HERC1-207ENST00000560316 SLC25A14O95258 325 aaPredicted RBP16.29■□□□□ 0.2
HERC1-207ENST00000560316 TCF4P15884 667 aa16.29■□□□□ 0.2
HERC1-207ENST00000560316 ZNF7P17097 686 aaPredicted RBP16.29■□□□□ 0.2
HERC1-207ENST00000560316 IL4RP24394 825 aa16.29■□□□□ 0.2
HERC1-207ENST00000560316 ITGA1P56199 1179 aa16.29■□□□□ 0.2
HERC1-207ENST00000560316 DPYSL2Q16555 572 aa16.29■□□□□ 0.2
HERC1-207ENST00000560316 ALS2CLQ60I27 953 aa16.29■□□□□ 0.2
HERC1-207ENST00000560316 LCN10Q6JVE6 187 aa16.29■□□□□ 0.2
HERC1-207ENST00000560316 NEK11Q8NG66 645 aa16.29■□□□□ 0.2
HERC1-207ENST00000560316 UBXN4Q92575 508 aa16.29■□□□□ 0.2
HERC1-207ENST00000560316 CXorf40BQ96DE9 158 aa16.29■□□□□ 0.2
HERC1-207ENST00000560316 ZNF514Q96K75 400 aaPredicted RBP16.29■□□□□ 0.2
HERC1-207ENST00000560316 LYSMD1Q96S90 227 aa16.29■□□□□ 0.2
HERC1-207ENST00000560316 MLPHQ9BV36 600 aaPredicted RBP16.29■□□□□ 0.2
HERC1-207ENST00000560316 SPATA16Q9BXB7 569 aa16.29■□□□□ 0.2
HERC1-207ENST00000560316 CHST8Q9H2A9 424 aa16.29■□□□□ 0.2
HERC1-207ENST00000560316 WASH6PQ9NQA3 447 aa16.29■□□□□ 0.2
HERC1-207ENST00000560316 FGF21Q9NSA1 209 aa16.29■□□□□ 0.2
HERC1-207ENST00000560316 GPR83Q9NYM4 423 aa16.29■□□□□ 0.2
HERC1-207ENST00000560316 SEMA5BQ9P283 1151 aa16.29■□□□□ 0.2
HERC1-207ENST00000560316 G3BP2Q9UN86 482 aaKnown RBP16.29■□□□□ 0.2
HERC1-207ENST00000560316 CHUKO15111 745 aa16.28■□□□□ 0.2
HERC1-207ENST00000560316 KMOO15229 486 aa16.28■□□□□ 0.2
HERC1-207ENST00000560316 CPNE3O75131 537 aaKnown RBP16.28■□□□□ 0.2
HERC1-207ENST00000560316 ACY1Q03154 408 aa16.28■□□□□ 0.2
HERC1-207ENST00000560316 ANKRD20A8PQ5CZ79 823 aa16.28■□□□□ 0.2
HERC1-207ENST00000560316 ZNF569Q5MCW4 686 aa16.28■□□□□ 0.2
HERC1-207ENST00000560316 IZUMO3Q5VZ72 239 aa16.28■□□□□ 0.2
HERC1-207ENST00000560316 ABRAXAS1Q6UWZ7 409 aa16.28■□□□□ 0.2
HERC1-207ENST00000560316 HPS6Q86YV9 775 aa16.28■□□□□ 0.2
HERC1-207ENST00000560316 TMEM126BQ8IUX1 230 aa16.28■□□□□ 0.2
HERC1-207ENST00000560316 IQCKQ8N0W5 287 aa16.28■□□□□ 0.2
HERC1-207ENST00000560316 TTC30BQ8N4P2 665 aa16.28■□□□□ 0.2
HERC1-207ENST00000560316 ENDOVQ8N8Q3 282 aaKnown RBP16.28■□□□□ 0.2
HERC1-207ENST00000560316 SLC38A9Q8NBW4 561 aa16.28■□□□□ 0.2
HERC1-207ENST00000560316 MARVELD3Q96A59 401 aa16.28■□□□□ 0.2
HERC1-207ENST00000560316 MAP3K3Q99759 626 aa16.28■□□□□ 0.2
HERC1-207ENST00000560316 RAB33BQ9H082 229 aa16.28■□□□□ 0.2
HERC1-207ENST00000560316 PCDH9Q9HC56 1237 aa16.28■□□□□ 0.2
HERC1-207ENST00000560316 TRIM39Q9HCM9 518 aa16.28■□□□□ 0.2
HERC1-207ENST00000560316 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.28■□□□□ 0.2
HERC1-207ENST00000560316 SNX7Q9UNH6 387 aa16.28■□□□□ 0.2
HERC1-207ENST00000560316 ARHGAP10A1A4S6 786 aa16.27■□□□□ 0.2
HERC1-207ENST00000560316 MTX2O75431 263 aa16.27■□□□□ 0.2
HERC1-207ENST00000560316 SCRG1O75711 98 aa16.27■□□□□ 0.2
HERC1-207ENST00000560316 HNRNPH3P31942 346 aaKnown RBP16.27■□□□□ 0.2
HERC1-207ENST00000560316 SERPINB6P35237 376 aa16.27■□□□□ 0.2
HERC1-207ENST00000560316 ARL4DP49703 201 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms