RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 SUFUQ9UMX1 484 aa12.12□□□□□ -0.47
USP8-209ENST00000560297 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.12□□□□□ -0.47
USP8-209ENST00000560297 V9GYY5 206 aaPredicted RBP12.12□□□□□ -0.47
USP8-209ENST00000560297 DOCK9Q9BZ29 2069 aa12.11□□□□□ -0.47
USP8-209ENST00000560297 A0A1B0GTQ1 180 aa12.11□□□□□ -0.47
USP8-209ENST00000560297 PRMT5O14744 637 aaPredicted RBP12.11□□□□□ -0.47
USP8-209ENST00000560297 KMOO15229 486 aa12.11□□□□□ -0.47
USP8-209ENST00000560297 GRID2O43424 1007 aa12.11□□□□□ -0.47
USP8-209ENST00000560297 KCNJ13O60928 360 aa12.11□□□□□ -0.47
USP8-209ENST00000560297 MTX2O75431 263 aa12.11□□□□□ -0.47
USP8-209ENST00000560297 S1PR4O95977 384 aa12.11□□□□□ -0.47
USP8-209ENST00000560297 FUCA1P04066 466 aa12.11□□□□□ -0.47
USP8-209ENST00000560297 FAM153BP0C7A2 387 aa12.11□□□□□ -0.47
USP8-209ENST00000560297 PRSS56P0CW18 603 aa12.11□□□□□ -0.47
USP8-209ENST00000560297 CTSEP14091 401 aa12.11□□□□□ -0.47
USP8-209ENST00000560297 STX2P32856 288 aa12.11□□□□□ -0.47
USP8-209ENST00000560297 ADARP55265 1226 aaKnown RBP12.11□□□□□ -0.47
USP8-209ENST00000560297 GPX6P59796 221 aa12.11□□□□□ -0.47
USP8-209ENST00000560297 VSNL1P62760 191 aa12.11□□□□□ -0.47
USP8-209ENST00000560297 LRP8Q14114 963 aa12.11□□□□□ -0.47
USP8-209ENST00000560297 FAM153CQ494X1 144 aa12.11□□□□□ -0.47
USP8-209ENST00000560297 KHDC1Q4VXA5 237 aaKnown RBP12.11□□□□□ -0.47
USP8-209ENST00000560297 PYCR3Q53H96 274 aa12.11□□□□□ -0.47
USP8-209ENST00000560297 ZNF648Q5T619 568 aaPredicted RBP12.11□□□□□ -0.47
USP8-209ENST00000560297 TEDDM1Q5T9Z0 273 aa12.11□□□□□ -0.47
USP8-209ENST00000560297 ZNF470Q6ECI4 717 aa12.11□□□□□ -0.47
USP8-209ENST00000560297 TRMT10BQ6PF06 316 aaKnown RBP12.11□□□□□ -0.47
USP8-209ENST00000560297 MARK2Q7KZI7 788 aaKnown RBP12.11□□□□□ -0.47
USP8-209ENST00000560297 ASCL5Q7RTU5 278 aa12.11□□□□□ -0.47
USP8-209ENST00000560297 RD3Q7Z3Z2 195 aa12.11□□□□□ -0.47
USP8-209ENST00000560297 GALNT7Q86SF2 657 aa12.11□□□□□ -0.47
USP8-209ENST00000560297 LRRTM4Q86VH4 590 aa12.11□□□□□ -0.47
USP8-209ENST00000560297 GALNT13Q8IUC8 556 aa12.11□□□□□ -0.47
USP8-209ENST00000560297 CNTN4Q8IWV2 1026 aa12.11□□□□□ -0.47
USP8-209ENST00000560297 RASGEF1AQ8N9B8 481 aa12.11□□□□□ -0.47
USP8-209ENST00000560297 C2CD4AQ8NCU7 369 aaPredicted RBP12.11□□□□□ -0.47
USP8-209ENST00000560297 PHOX2BQ99453 314 aa12.11□□□□□ -0.47
USP8-209ENST00000560297 GTPBP2Q9BX10 602 aaKnown RBP12.11□□□□□ -0.47
USP8-209ENST00000560297 CLPBQ9H078 707 aa12.11□□□□□ -0.47
USP8-209ENST00000560297 SMOC1Q9H4F8 434 aa12.11□□□□□ -0.47
USP8-209ENST00000560297 CARS2Q9HA77 564 aaKnown RBP12.11□□□□□ -0.47
USP8-209ENST00000560297 IARS2Q9NSE4 1012 aaKnown RBP12.11□□□□□ -0.47
USP8-209ENST00000560297 TRNAU1APQ9NX07 287 aaKnown RBP12.11□□□□□ -0.47
USP8-209ENST00000560297 IL1RAPL1Q9NZN1 696 aa12.11□□□□□ -0.47
USP8-209ENST00000560297 ZFATQ9P243 1243 aa12.11□□□□□ -0.47
USP8-209ENST00000560297 SPASTQ9UBP0 616 aa12.11□□□□□ -0.47
USP8-209ENST00000560297 FBXO5Q9UKT4 447 aa12.11□□□□□ -0.47
USP8-209ENST00000560297 RAB21Q9UL25 225 aa12.11□□□□□ -0.47
USP8-209ENST00000560297 LRRK1Q38SD2 2015 aa12.11□□□□□ -0.47
USP8-209ENST00000560297 CEP192Q8TEP8 1941 aa12.11□□□□□ -0.47
USP8-209ENST00000560297 TCRBV9S1A1TA0A576 114 aa12.1□□□□□ -0.47
USP8-209ENST00000560297 LNP1A1A4G5 178 aa12.1□□□□□ -0.47
USP8-209ENST00000560297 NEMP2A6NFY4 417 aa12.1□□□□□ -0.47
USP8-209ENST00000560297 H3BMM5 538 aa12.1□□□□□ -0.47
USP8-209ENST00000560297 GSTM1P09488 218 aa12.1□□□□□ -0.47
USP8-209ENST00000560297 OR56A5P0C7T3 313 aa12.1□□□□□ -0.47
USP8-209ENST00000560297 ZNF883P0CG24 379 aa12.1□□□□□ -0.47
USP8-209ENST00000560297 MYBL2P10244 700 aa12.1□□□□□ -0.47
USP8-209ENST00000560297 VCLP18206 1134 aa12.1□□□□□ -0.47
USP8-209ENST00000560297 TGM1P22735 817 aa12.1□□□□□ -0.47
USP8-209ENST00000560297 RPS3P23396 243 aaKnown RBP eCLIP12.1□□□□□ -0.47
USP8-209ENST00000560297 GNPDA1P46926 289 aa12.1□□□□□ -0.47
USP8-209ENST00000560297 LEPRP48357 1165 aaKnown RBP12.1□□□□□ -0.47
USP8-209ENST00000560297 PMS2P54278 862 aa12.1□□□□□ -0.47
USP8-209ENST00000560297 B4GALNT1Q00973 533 aa12.1□□□□□ -0.47
USP8-209ENST00000560297 GSTM4Q03013 218 aa12.1□□□□□ -0.47
USP8-209ENST00000560297 CTBP1Q13363 440 aa12.1□□□□□ -0.47
USP8-209ENST00000560297 SEMA3AQ14563 771 aa12.1□□□□□ -0.47
USP8-209ENST00000560297 SUZ12Q15022 739 aaKnown RBP12.1□□□□□ -0.47
USP8-209ENST00000560297 ELOCQ15369 112 aa12.1□□□□□ -0.47
USP8-209ENST00000560297 SF3A2Q15428 464 aaKnown RBP12.1□□□□□ -0.47
USP8-209ENST00000560297 BCL7AQ4VC05 210 aa12.1□□□□□ -0.47
USP8-209ENST00000560297 ZNF542PQ5EBM4 170 aa12.1□□□□□ -0.47
USP8-209ENST00000560297 PRAMEF14Q5SWL7 426 aa12.1□□□□□ -0.47
USP8-209ENST00000560297 TCEAL6Q6IPX3 200 aa12.1□□□□□ -0.47
USP8-209ENST00000560297 TMEM220Q6QAJ8 160 aa12.1□□□□□ -0.47
USP8-209ENST00000560297 PRR23CQ6ZRP0 262 aa12.1□□□□□ -0.47
USP8-209ENST00000560297 CAPN12Q6ZSI9 719 aa12.1□□□□□ -0.47
USP8-209ENST00000560297 LDB1Q86U70 411 aaPredicted RBP12.1□□□□□ -0.47
USP8-209ENST00000560297 SLC26A11Q86WA9 606 aa12.1□□□□□ -0.47
USP8-209ENST00000560297 UNC5BQ8IZJ1 945 aa12.1□□□□□ -0.47
USP8-209ENST00000560297 FSTL5Q8N475 847 aaPredicted RBP12.1□□□□□ -0.47
USP8-209ENST00000560297 TCEAL3Q969E4 200 aa12.1□□□□□ -0.47
USP8-209ENST00000560297 SGF29Q96ES7 293 aa12.1□□□□□ -0.47
USP8-209ENST00000560297 PDXPQ96GD0 296 aa12.1□□□□□ -0.47
USP8-209ENST00000560297 LINC00615Q96LM1 132 aaPredicted RBP12.1□□□□□ -0.47
USP8-209ENST00000560297 OR2M4Q96R27 311 aa12.1□□□□□ -0.47
USP8-209ENST00000560297 BOCQ9BWV1 1114 aa12.1□□□□□ -0.47
USP8-209ENST00000560297 TXLNGYQ9BZA5 131 aa12.1□□□□□ -0.47
USP8-209ENST00000560297 CDC42EP4Q9H3Q1 356 aaKnown RBP12.1□□□□□ -0.47
USP8-209ENST00000560297 MRPL40Q9NQ50 206 aaKnown RBP12.1□□□□□ -0.47
USP8-209ENST00000560297 FSCN3Q9NQT6 498 aa12.1□□□□□ -0.47
USP8-209ENST00000560297 DNAAF2Q9NVR5 837 aaKnown RBP12.1□□□□□ -0.47
USP8-209ENST00000560297 NINJ2Q9NZG7 142 aa12.1□□□□□ -0.47
USP8-209ENST00000560297 APOBEC3BQ9UH17 382 aaKnown RBP12.1□□□□□ -0.47
USP8-209ENST00000560297 RAPGEFL1Q9UHV5 662 aa12.1□□□□□ -0.47
USP8-209ENST00000560297 KLF15Q9UIH9 416 aa12.1□□□□□ -0.47
USP8-209ENST00000560297 GPSM3Q9Y4H4 160 aa12.1□□□□□ -0.47
USP8-209ENST00000560297 PCDHB1Q9Y5F3 818 aa12.1□□□□□ -0.47
USP8-209ENST00000560297 CSNK1G3Q9Y6M4 447 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms