RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 GPR18Q14330 331 aa19.42■□□□□ 0.7
RABGGTA-214ENST00000560163 C1QL3Q5VWW1 255 aa19.42■□□□□ 0.7
RABGGTA-214ENST00000560163 PPP1R2P3Q6NXS1 205 aa19.42■□□□□ 0.7
RABGGTA-214ENST00000560163 ADGRG6Q86SQ4 1221 aa19.42■□□□□ 0.7
RABGGTA-214ENST00000560163 BPHLQ86WA6 291 aaPredicted RBP19.42■□□□□ 0.7
RABGGTA-214ENST00000560163 LRRC49Q8IUZ0 686 aa19.42■□□□□ 0.7
RABGGTA-214ENST00000560163 RBMXL3Q8N7X1 1067 aaKnown RBP19.42■□□□□ 0.7
RABGGTA-214ENST00000560163 MAML1Q92585 1016 aa19.42■□□□□ 0.7
RABGGTA-214ENST00000560163 POT1Q9NUX5 634 aa19.42■□□□□ 0.7
RABGGTA-214ENST00000560163 LUZP4Q9P127 313 aa19.42■□□□□ 0.7
RABGGTA-214ENST00000560163 RARRES3Q9UL19 164 aa19.42■□□□□ 0.7
RABGGTA-214ENST00000560163 RPL26L1Q9UNX3 145 aaKnown RBP19.42■□□□□ 0.7
RABGGTA-214ENST00000560163 FARSAQ9Y285 508 aaKnown RBP19.42■□□□□ 0.7
RABGGTA-214ENST00000560163 C1orf232A0A0U1RR37 186 aa19.41■□□□□ 0.7
RABGGTA-214ENST00000560163 TMCO5BA8MYB1 307 aa19.41■□□□□ 0.7
RABGGTA-214ENST00000560163 DPM1O60762 260 aa19.41■□□□□ 0.7
RABGGTA-214ENST00000560163 CBX6O95503 412 aa19.41■□□□□ 0.7
RABGGTA-214ENST00000560163 FERP16591 822 aa19.41■□□□□ 0.7
RABGGTA-214ENST00000560163 ZNF7P17097 686 aaPredicted RBP19.41■□□□□ 0.7
RABGGTA-214ENST00000560163 PTGIRP43119 386 aa19.41■□□□□ 0.7
RABGGTA-214ENST00000560163 PPP1CAP62136 330 aa19.41■□□□□ 0.7
RABGGTA-214ENST00000560163 RPS15P62841 145 aaKnown RBP19.41■□□□□ 0.7
RABGGTA-214ENST00000560163 TUBB3Q13509 450 aa19.41■□□□□ 0.7
RABGGTA-214ENST00000560163 KCNAB1Q14722 419 aa19.41■□□□□ 0.7
RABGGTA-214ENST00000560163 SMTNL2Q2TAL5 461 aa19.41■□□□□ 0.7
RABGGTA-214ENST00000560163 BOLA3Q53S33 107 aa19.41■□□□□ 0.7
RABGGTA-214ENST00000560163 SLC6A19Q695T7 634 aa19.41■□□□□ 0.7
RABGGTA-214ENST00000560163 WASH2PQ6VEQ5 465 aa19.41■□□□□ 0.7
RABGGTA-214ENST00000560163 HPS6Q86YV9 775 aa19.41■□□□□ 0.7
RABGGTA-214ENST00000560163 TRIM48Q8IWZ4 208 aa19.41■□□□□ 0.7
RABGGTA-214ENST00000560163 RBM12BQ8IXT5 1001 aaKnown RBP19.41■□□□□ 0.7
RABGGTA-214ENST00000560163 PNPLA2Q96AD5 504 aa19.41■□□□□ 0.7
RABGGTA-214ENST00000560163 C19orf60Q96EN9 201 aa19.41■□□□□ 0.7
RABGGTA-214ENST00000560163 SLC29A3Q9BZD2 475 aa19.41■□□□□ 0.7
RABGGTA-214ENST00000560163 PCDH9Q9HC56 1237 aa19.41■□□□□ 0.7
RABGGTA-214ENST00000560163 SLAMF7Q9NQ25 335 aa19.41■□□□□ 0.7
RABGGTA-214ENST00000560163 WASH6PQ9NQA3 447 aa19.41■□□□□ 0.7
RABGGTA-214ENST00000560163 PKD2L2Q9NZM6 624 aa19.41■□□□□ 0.7
RABGGTA-214ENST00000560163 OR52A4PA6NMU1 304 aa19.4■□□□□ 0.7
RABGGTA-214ENST00000560163 RARAP10276 462 aa19.4■□□□□ 0.7
RABGGTA-214ENST00000560163 IL4RP24394 825 aa19.4■□□□□ 0.7
RABGGTA-214ENST00000560163 SERPINB6P35237 376 aa19.4■□□□□ 0.7
RABGGTA-214ENST00000560163 NIPAL4Q0D2K0 466 aa19.4■□□□□ 0.7
RABGGTA-214ENST00000560163 ANKRD20A8PQ5CZ79 823 aa19.4■□□□□ 0.7
RABGGTA-214ENST00000560163 AGAP9Q5VTM2 703 aa19.4■□□□□ 0.7
RABGGTA-214ENST00000560163 TXNRD3NBQ6F5E7 133 aa19.4■□□□□ 0.7
RABGGTA-214ENST00000560163 IRGCQ6NXR0 463 aa19.4■□□□□ 0.7
RABGGTA-214ENST00000560163 ZNF547Q8IVP9 402 aa19.4■□□□□ 0.7
RABGGTA-214ENST00000560163 SIDT2Q8NBJ9 832 aaKnown RBP19.4■□□□□ 0.7
RABGGTA-214ENST00000560163 LPCAT1Q8NF37 534 aa19.4■□□□□ 0.7
RABGGTA-214ENST00000560163 FDCSPQ8NFU4 85 aa19.4■□□□□ 0.7
RABGGTA-214ENST00000560163 UBXN4Q92575 508 aa19.4■□□□□ 0.7
RABGGTA-214ENST00000560163 HSPH1Q92598 858 aa19.4■□□□□ 0.7
RABGGTA-214ENST00000560163 ERGIC2Q96RQ1 377 aa19.4■□□□□ 0.7
RABGGTA-214ENST00000560163 TIMM29Q9BSF4 260 aa19.4■□□□□ 0.7
RABGGTA-214ENST00000560163 NUDT9Q9BW91 350 aa19.4■□□□□ 0.7
RABGGTA-214ENST00000560163 MFRPQ9BY79 579 aa19.4■□□□□ 0.7
RABGGTA-214ENST00000560163 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.4■□□□□ 0.7
RABGGTA-214ENST00000560163 SSU72P8A0A1W2PR75 194 aa19.39■□□□□ 0.69
RABGGTA-214ENST00000560163 KMOO15229 486 aa19.39■□□□□ 0.69
RABGGTA-214ENST00000560163 MATN3O15232 486 aa19.39■□□□□ 0.69
RABGGTA-214ENST00000560163 SLC25A14O95258 325 aaPredicted RBP19.39■□□□□ 0.69
RABGGTA-214ENST00000560163 TPM2P07951 284 aa19.39■□□□□ 0.69
RABGGTA-214ENST00000560163 RPL10P27635 214 aaKnown RBP19.39■□□□□ 0.69
RABGGTA-214ENST00000560163 SEPT7Q16181 437 aaKnown RBP19.39■□□□□ 0.69
RABGGTA-214ENST00000560163 QPCTQ16769 361 aa19.39■□□□□ 0.69
RABGGTA-214ENST00000560163 TDRD12Q587J7 1177 aaKnown RBP19.39■□□□□ 0.69
RABGGTA-214ENST00000560163 IZUMO3Q5VZ72 239 aa19.39■□□□□ 0.69
RABGGTA-214ENST00000560163 CRTC3Q6UUV7 619 aa19.39■□□□□ 0.69
RABGGTA-214ENST00000560163 CERS6Q6ZMG9 384 aa19.39■□□□□ 0.69
RABGGTA-214ENST00000560163 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.39■□□□□ 0.69
RABGGTA-214ENST00000560163 SLC38A9Q8NBW4 561 aa19.39■□□□□ 0.69
RABGGTA-214ENST00000560163 PCMTD1Q96MG8 357 aaPredicted RBP19.39■□□□□ 0.69
RABGGTA-214ENST00000560163 PCDH18Q9HCL0 1135 aa19.39■□□□□ 0.69
RABGGTA-214ENST00000560163 FANCLQ9NW38 375 aa19.39■□□□□ 0.69
RABGGTA-214ENST00000560163 AMACRQ9UHK6 382 aa19.39■□□□□ 0.69
RABGGTA-214ENST00000560163 SLC5A6Q9Y289 635 aa19.39■□□□□ 0.69
RABGGTA-214ENST00000560163 DNAJC16Q9Y2G8 782 aa19.39■□□□□ 0.69
RABGGTA-214ENST00000560163 LGALS16A8MUM7 142 aa19.38■□□□□ 0.69
RABGGTA-214ENST00000560163 ANKRD66B4E2M5 251 aa19.38■□□□□ 0.69
RABGGTA-214ENST00000560163 KRT86O43790 486 aa19.38■□□□□ 0.69
RABGGTA-214ENST00000560163 MTA2O94776 668 aa19.38■□□□□ 0.69
RABGGTA-214ENST00000560163 JCHAINP01591 159 aa19.38■□□□□ 0.69
RABGGTA-214ENST00000560163 CCDC172P0C7W6 258 aa19.38■□□□□ 0.69
RABGGTA-214ENST00000560163 EBLN1P0CF75 366 aa19.38■□□□□ 0.69
RABGGTA-214ENST00000560163 ELAVL4P26378 380 aaKnown RBP19.38■□□□□ 0.69
RABGGTA-214ENST00000560163 ACY1Q03154 408 aa19.38■□□□□ 0.69
RABGGTA-214ENST00000560163 INSCQ1MX18 579 aa19.38■□□□□ 0.69
RABGGTA-214ENST00000560163 PLA2G4EQ3MJ16 856 aa19.38■□□□□ 0.69
RABGGTA-214ENST00000560163 C11orf96Q7Z7L8 435 aa19.38■□□□□ 0.69
RABGGTA-214ENST00000560163 RHOT1Q8IXI2 618 aa19.38■□□□□ 0.69
RABGGTA-214ENST00000560163 GPR26Q8NDV2 337 aa19.38■□□□□ 0.69
RABGGTA-214ENST00000560163 CCHCR1Q8TD31 782 aa19.38■□□□□ 0.69
RABGGTA-214ENST00000560163 FATE1Q969F0 183 aa19.38■□□□□ 0.69
RABGGTA-214ENST00000560163 SNRNP40Q96DI7 357 aaKnown RBP19.38■□□□□ 0.69
RABGGTA-214ENST00000560163 ZNF514Q96K75 400 aaPredicted RBP19.38■□□□□ 0.69
RABGGTA-214ENST00000560163 SMAD5Q99717 465 aaKnown RBP19.38■□□□□ 0.69
RABGGTA-214ENST00000560163 MLPHQ9BV36 600 aaPredicted RBP19.38■□□□□ 0.69
RABGGTA-214ENST00000560163 FGF21Q9NSA1 209 aa19.38■□□□□ 0.69
RABGGTA-214ENST00000560163 RBM22Q9NW64 420 aaKnown RBP eCLIP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms