RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 SARS2Q9NP81 518 aaKnown RBP17.48■□□□□ 0.39
HDDC3-205ENST00000559898 PDP2Q9P2J9 529 aa17.48■□□□□ 0.39
HDDC3-205ENST00000559898 CPNE7Q9UBL6 633 aa17.48■□□□□ 0.39
HDDC3-205ENST00000559898 RSPH14Q9UHP6 348 aa17.48■□□□□ 0.39
HDDC3-205ENST00000559898 PACSIN2Q9UNF0 486 aaPredicted RBP17.48■□□□□ 0.39
HDDC3-205ENST00000559898 WDR37Q9Y2I8 494 aa17.48■□□□□ 0.39
HDDC3-205ENST00000559898 PCDHA3Q9Y5H8 950 aa17.48■□□□□ 0.39
HDDC3-205ENST00000559898 GCN1Q92616 2671 aaKnown RBP17.48■□□□□ 0.39
HDDC3-205ENST00000559898 OR52A4PA6NMU1 304 aa17.47■□□□□ 0.39
HDDC3-205ENST00000559898 PYGMP11217 842 aa17.47■□□□□ 0.39
HDDC3-205ENST00000559898 HMGCLP35914 325 aa17.47■□□□□ 0.39
HDDC3-205ENST00000559898 INSCQ1MX18 579 aa17.47■□□□□ 0.39
HDDC3-205ENST00000559898 LINC00303Q3SY05 128 aa17.47■□□□□ 0.39
HDDC3-205ENST00000559898 ANKS6Q68DC2 871 aa17.47■□□□□ 0.39
HDDC3-205ENST00000559898 FAM83HQ6ZRV2 1179 aaPredicted RBP17.47■□□□□ 0.39
HDDC3-205ENST00000559898 BZW1Q7L1Q6 419 aaKnown RBP17.47■□□□□ 0.39
HDDC3-205ENST00000559898 LRRTM4Q86VH4 590 aa17.47■□□□□ 0.39
HDDC3-205ENST00000559898 PHYKPLQ8IUZ5 450 aa17.47■□□□□ 0.39
HDDC3-205ENST00000559898 EXD3Q8N9H8 876 aa17.47■□□□□ 0.39
HDDC3-205ENST00000559898 LRRC57Q8N9N7 239 aa17.47■□□□□ 0.39
HDDC3-205ENST00000559898 TMEM159Q96B96 161 aa17.47■□□□□ 0.39
HDDC3-205ENST00000559898 AHCYL2Q96HN2 611 aaKnown RBP17.47■□□□□ 0.39
HDDC3-205ENST00000559898 RBM41Q96IZ5 413 aaKnown RBP17.47■□□□□ 0.39
HDDC3-205ENST00000559898 ZMYND15Q9H091 742 aa17.47■□□□□ 0.39
HDDC3-205ENST00000559898 ARL5AQ9Y689 179 aa17.47■□□□□ 0.39
HDDC3-205ENST00000559898 MACROD2A1Z1Q3 448 aa17.46■□□□□ 0.39
HDDC3-205ENST00000559898 APOC4-APOC2K7ER74 178 aa17.46■□□□□ 0.39
HDDC3-205ENST00000559898 HGSO14964 777 aaPredicted RBP17.46■□□□□ 0.39
HDDC3-205ENST00000559898 PJA2O43164 708 aa17.46■□□□□ 0.39
HDDC3-205ENST00000559898 CDK14O94921 469 aa17.46■□□□□ 0.39
HDDC3-205ENST00000559898 APOC2P02655 101 aa17.46■□□□□ 0.39
HDDC3-205ENST00000559898 TYRP1P17643 537 aa17.46■□□□□ 0.39
HDDC3-205ENST00000559898 PSMB4P28070 264 aa17.46■□□□□ 0.39
HDDC3-205ENST00000559898 GPLD1P80108 840 aa17.46■□□□□ 0.39
HDDC3-205ENST00000559898 RHDQ02161 417 aa17.46■□□□□ 0.39
HDDC3-205ENST00000559898 TMEM115Q12893 351 aaPredicted RBP17.46■□□□□ 0.39
HDDC3-205ENST00000559898 MSLNQ13421 630 aaPredicted RBP17.46■□□□□ 0.39
HDDC3-205ENST00000559898 CLCA4Q14CN2 919 aa17.46■□□□□ 0.39
HDDC3-205ENST00000559898 XKR5Q6UX68 686 aa17.46■□□□□ 0.39
HDDC3-205ENST00000559898 ARHGAP22Q7Z5H3 698 aa17.46■□□□□ 0.39
HDDC3-205ENST00000559898 SLC9B2Q86UD5 537 aa17.46■□□□□ 0.39
HDDC3-205ENST00000559898 FAM129CQ86XR2 697 aa17.46■□□□□ 0.39
HDDC3-205ENST00000559898 RASGEF1AQ8N9B8 481 aa17.46■□□□□ 0.39
HDDC3-205ENST00000559898 OR10G6Q8NH81 332 aa17.46■□□□□ 0.39
HDDC3-205ENST00000559898 TAAR9Q96RI9 348 aa17.46■□□□□ 0.39
HDDC3-205ENST00000559898 DESI2Q9BSY9 194 aa17.46■□□□□ 0.39
HDDC3-205ENST00000559898 OSBPL8Q9BZF1 889 aa17.46■□□□□ 0.39
HDDC3-205ENST00000559898 GBA3Q9H227 469 aa17.46■□□□□ 0.39
HDDC3-205ENST00000559898 SLC39A1Q9NY26 324 aa17.46■□□□□ 0.39
HDDC3-205ENST00000559898 HACD1B0YJ81 288 aa17.45■□□□□ 0.38
HDDC3-205ENST00000559898 PYCARD-AS1I3L0S3 204 aa17.45■□□□□ 0.38
HDDC3-205ENST00000559898 TK2O00142 265 aa17.45■□□□□ 0.38
HDDC3-205ENST00000559898 KMOO15229 486 aa17.45■□□□□ 0.38
HDDC3-205ENST00000559898 DUX1O43812 170 aa17.45■□□□□ 0.38
HDDC3-205ENST00000559898 CTNNA2P26232 953 aa17.45■□□□□ 0.38
HDDC3-205ENST00000559898 ADRA1AP35348 466 aa17.45■□□□□ 0.38
HDDC3-205ENST00000559898 CLCNKAP51800 687 aa17.45■□□□□ 0.38
HDDC3-205ENST00000559898 NAP1L1P55209 391 aaKnown RBP17.45■□□□□ 0.38
HDDC3-205ENST00000559898 PPP1CAP62136 330 aa17.45■□□□□ 0.38
HDDC3-205ENST00000559898 MPP3Q13368 585 aa17.45■□□□□ 0.38
HDDC3-205ENST00000559898 PEX6Q13608 980 aa17.45■□□□□ 0.38
HDDC3-205ENST00000559898 SPARCL1Q14515 664 aa17.45■□□□□ 0.38
HDDC3-205ENST00000559898 ANKRD20A2Q5SQ80 823 aa17.45■□□□□ 0.38
HDDC3-205ENST00000559898 ANKRD20A1Q5TYW2 823 aa17.45■□□□□ 0.38
HDDC3-205ENST00000559898 ANKRD20A3Q5VUR7 823 aa17.45■□□□□ 0.38
HDDC3-205ENST00000559898 PDPK2PQ6A1A2 396 aa17.45■□□□□ 0.38
HDDC3-205ENST00000559898 CCDC70Q6NSX1 233 aa17.45■□□□□ 0.38
HDDC3-205ENST00000559898 GLT6D1Q7Z4J2 308 aa17.45■□□□□ 0.38
HDDC3-205ENST00000559898 TMTC1Q8IUR5 882 aa17.45■□□□□ 0.38
HDDC3-205ENST00000559898 BEND7Q8N7W2 519 aaPredicted RBP17.45■□□□□ 0.38
HDDC3-205ENST00000559898 AGBL5Q8NDL9 886 aa17.45■□□□□ 0.38
HDDC3-205ENST00000559898 GDAP1Q8TB36 358 aa17.45■□□□□ 0.38
HDDC3-205ENST00000559898 CCDC110Q8TBZ0 833 aa17.45■□□□□ 0.38
HDDC3-205ENST00000559898 NKD1Q969G9 470 aa17.45■□□□□ 0.38
HDDC3-205ENST00000559898 VPS35Q96QK1 796 aa17.45■□□□□ 0.38
HDDC3-205ENST00000559898 PCDHGA4Q9Y5G9 962 aa17.45■□□□□ 0.38
HDDC3-205ENST00000559898 BSNQ9UPA5 3926 aa17.44■□□□□ 0.38
HDDC3-205ENST00000559898 KIR2DS5A0A0G2JLQ3 304 aa17.44■□□□□ 0.38
HDDC3-205ENST00000559898 A0A0G2JNG1 304 aa17.44■□□□□ 0.38
HDDC3-205ENST00000559898 TCRBV7S2A1N4TA0A589 114 aa17.44■□□□□ 0.38
HDDC3-205ENST00000559898 PDZK1P1A8MUH7 402 aa17.44■□□□□ 0.38
HDDC3-205ENST00000559898 KIR2DS3K7RE56 304 aa17.44■□□□□ 0.38
HDDC3-205ENST00000559898 CCL22O00626 93 aa17.44■□□□□ 0.38
HDDC3-205ENST00000559898 EPOP01588 193 aa17.44■□□□□ 0.38
HDDC3-205ENST00000559898 CSTF2P33240 577 aaKnown RBP eCLIP17.44■□□□□ 0.38
HDDC3-205ENST00000559898 SPAM1P38567 509 aa17.44■□□□□ 0.38
HDDC3-205ENST00000559898 LEPRP48357 1165 aaKnown RBP17.44■□□□□ 0.38
HDDC3-205ENST00000559898 EIF3EP60228 445 aaKnown RBP17.44■□□□□ 0.38
HDDC3-205ENST00000559898 C19orf57Q0VDD7 668 aa17.44■□□□□ 0.38
HDDC3-205ENST00000559898 XRCC4Q13426 336 aa17.44■□□□□ 0.38
HDDC3-205ENST00000559898 TRA2AQ13595 282 aaKnown RBP eCLIP17.44■□□□□ 0.38
HDDC3-205ENST00000559898 KIR2DS5Q14953 304 aa17.44■□□□□ 0.38
HDDC3-205ENST00000559898 CLPPQ16740 277 aaPredicted RBP17.44■□□□□ 0.38
HDDC3-205ENST00000559898 MANEAQ5SRI9 462 aa17.44■□□□□ 0.38
HDDC3-205ENST00000559898 WDR74Q6RFH5 385 aaPredicted RBP17.44■□□□□ 0.38
HDDC3-205ENST00000559898 TRAPPC5Q8IUR0 188 aa17.44■□□□□ 0.38
HDDC3-205ENST00000559898 GPR150Q8NGU9 434 aa17.44■□□□□ 0.38
HDDC3-205ENST00000559898 RSC1A1Q92681 617 aa17.44■□□□□ 0.38
HDDC3-205ENST00000559898 EXTL1Q92935 676 aa17.44■□□□□ 0.38
HDDC3-205ENST00000559898 TIMM29Q9BSF4 260 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms