RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 HENMT1Q5T8I9 393 aaKnown RBP12.54□□□□□ -0.4
USP3-213ENST00000559711 NUDT18Q6ZVK8 323 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 Q6ZVL8 140 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 NRSN1Q8IZ57 195 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 TRAM1L1Q8N609 369 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 PTGR2Q8N8N7 351 aaPredicted RBP12.54□□□□□ -0.4
USP3-213ENST00000559711 LKAAEAR1Q8TD35 194 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 SUSD6Q92537 303 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 ARRDC3Q96B67 414 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 RILPQ96NA2 401 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 NECTIN4Q96NY8 510 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 EML4Q9HC35 981 aaKnown RBP12.54□□□□□ -0.4
USP3-213ENST00000559711 SPATS2LQ9NUQ6 558 aaKnown RBP12.54□□□□□ -0.4
USP3-213ENST00000559711 CD84Q9UIB8 345 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 TMCO1Q9UM00 188 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 SORCS3Q9UPU3 1222 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 NPEPPSL1A6NEC2 478 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 CAPN14A8MX76 684 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 BTN3A1O00481 513 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 AREL1O15033 823 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 SPINT1O43278 529 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 APODP05090 189 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 ETV3P41162 512 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 GRIN2CQ14957 1233 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 PFKFB4Q16877 469 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 POM121L1PQ3SYA9 428 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 SEL1L3Q68CR1 1132 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 ASRGL1Q7L266 308 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 RAB44Q7Z6P3 723 aaPredicted RBP12.54□□□□□ -0.4
USP3-213ENST00000559711 DSG4Q86SJ6 1040 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 KIRREL3Q8IZU9 778 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 SMRP1Q8NCR6 262 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 MAPK15Q8TD08 544 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 SCAMP4Q969E2 229 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 PRR11Q96HE9 360 aaPredicted RBP12.54□□□□□ -0.4
USP3-213ENST00000559711 PPP1R16AQ96I34 528 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 ZSCAN5AQ9BUG6 496 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 SPATA16Q9BXB7 569 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 PRSS16Q9NQE7 514 aa12.54□□□□□ -0.4
USP3-213ENST00000559711 DOCK8Q8NF50 2099 aa12.53□□□□□ -0.4
USP3-213ENST00000559711 ANHXE9PGG2 379 aa12.53□□□□□ -0.4
USP3-213ENST00000559711 STX16-NPEPL1H3BU86 382 aa12.53□□□□□ -0.4
USP3-213ENST00000559711 STX16O14662 325 aa12.53□□□□□ -0.4
USP3-213ENST00000559711 HNRNPCL1O60812 293 aaKnown RBP12.53□□□□□ -0.4
USP3-213ENST00000559711 TRIM16O95361 564 aa12.53□□□□□ -0.4
USP3-213ENST00000559711 ELFN1P0C7U0 828 aa12.53□□□□□ -0.4
USP3-213ENST00000559711 GFAPP14136 432 aa12.53□□□□□ -0.4
USP3-213ENST00000559711 GM2AP17900 193 aa12.53□□□□□ -0.4
USP3-213ENST00000559711 DGKAP23743 735 aa12.53□□□□□ -0.4
USP3-213ENST00000559711 RGS4P49798 205 aa12.53□□□□□ -0.4
USP3-213ENST00000559711 METAP1P53582 386 aa12.53□□□□□ -0.4
USP3-213ENST00000559711 NAA20P61599 178 aa12.53□□□□□ -0.4
USP3-213ENST00000559711 ELP6Q0PNE2 266 aa12.53□□□□□ -0.4
USP3-213ENST00000559711 HTR4Q13639 388 aa12.53□□□□□ -0.4
USP3-213ENST00000559711 SLC9B1Q4ZJI4 515 aa12.53□□□□□ -0.4
USP3-213ENST00000559711 VWA5B1Q5TIE3 1220 aa12.53□□□□□ -0.4
USP3-213ENST00000559711 METTL21CQ5VZV1 264 aa12.53□□□□□ -0.4
USP3-213ENST00000559711 EGFLAMQ63HQ2 1017 aa12.53□□□□□ -0.4
USP3-213ENST00000559711 CYP2U1Q7Z449 544 aa12.53□□□□□ -0.4
USP3-213ENST00000559711 GPSM1Q86YR5 675 aa12.53□□□□□ -0.4
USP3-213ENST00000559711 SUGP1Q8IWZ8 645 aaKnown RBP12.53□□□□□ -0.4
USP3-213ENST00000559711 FBXO39Q8N4B4 442 aa12.53□□□□□ -0.4
USP3-213ENST00000559711 ZBTB2Q8N680 514 aa12.53□□□□□ -0.4
USP3-213ENST00000559711 FAR2Q96K12 515 aa12.53□□□□□ -0.4
USP3-213ENST00000559711 COQ10AQ96MF6 247 aa12.53□□□□□ -0.4
USP3-213ENST00000559711 ASB2Q96Q27 587 aa12.53□□□□□ -0.4
USP3-213ENST00000559711 PANX3Q96QZ0 392 aa12.53□□□□□ -0.4
USP3-213ENST00000559711 ACOX2Q99424 681 aa12.53□□□□□ -0.4
USP3-213ENST00000559711 RIOK2Q9BVS4 552 aaKnown RBP12.53□□□□□ -0.4
USP3-213ENST00000559711 C1QTNF3Q9BXJ4 246 aa12.53□□□□□ -0.4
USP3-213ENST00000559711 FBRSL1Q9HCM7 1045 aaKnown RBP12.53□□□□□ -0.4
USP3-213ENST00000559711 CAPN7Q9Y6W3 813 aa12.53□□□□□ -0.4
USP3-213ENST00000559711 MYO9BQ13459 2157 aa12.53□□□□□ -0.4
USP3-213ENST00000559711 C5orf42Q9H799 3197 aa12.52□□□□□ -0.4
USP3-213ENST00000559711 ANTXRLA6NF34 631 aa12.52□□□□□ -0.4
USP3-213ENST00000559711 CFAP73A6NFT4 308 aa12.52□□□□□ -0.4
USP3-213ENST00000559711 SUPT3HB4E1H0 165 aa12.52□□□□□ -0.4
USP3-213ENST00000559711 NPC1O15118 1278 aa12.52□□□□□ -0.4
USP3-213ENST00000559711 MAGEC1O60732 1142 aa12.52□□□□□ -0.4
USP3-213ENST00000559711 DIAPH2O60879 1101 aa12.52□□□□□ -0.4
USP3-213ENST00000559711 SUPT3HO75486 399 aa12.52□□□□□ -0.4
USP3-213ENST00000559711 SUPT7LO94864 414 aa12.52□□□□□ -0.4
USP3-213ENST00000559711 CBX6O95503 412 aa12.52□□□□□ -0.4
USP3-213ENST00000559711 EPHX1P07099 455 aa12.52□□□□□ -0.4
USP3-213ENST00000559711 OR56A5P0C7T3 313 aa12.52□□□□□ -0.4
USP3-213ENST00000559711 CBSLP0DN79 551 aa12.52□□□□□ -0.4
USP3-213ENST00000559711 ATP1B2P14415 290 aaPredicted RBP12.52□□□□□ -0.4
USP3-213ENST00000559711 ITGB6P18564 788 aa12.52□□□□□ -0.4
USP3-213ENST00000559711 TARSP26639 723 aaKnown RBP12.52□□□□□ -0.4
USP3-213ENST00000559711 CBSP35520 551 aa12.52□□□□□ -0.4
USP3-213ENST00000559711 MAGEA9P43362 315 aa12.52□□□□□ -0.4
USP3-213ENST00000559711 TNFRSF4P43489 277 aa12.52□□□□□ -0.4
USP3-213ENST00000559711 GALK1P51570 392 aa12.52□□□□□ -0.4
USP3-213ENST00000559711 HK3P52790 923 aa12.52□□□□□ -0.4
USP3-213ENST00000559711 ALDH18A1P54886 795 aaKnown RBP12.52□□□□□ -0.4
USP3-213ENST00000559711 CREB5Q02930 508 aa12.52□□□□□ -0.4
USP3-213ENST00000559711 E2F5Q15329 346 aa12.52□□□□□ -0.4
USP3-213ENST00000559711 TBCCQ15814 346 aa12.52□□□□□ -0.4
USP3-213ENST00000559711 TTLL9Q3SXZ7 439 aa12.52□□□□□ -0.4
USP3-213ENST00000559711 SH2D4BQ5SQS7 431 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 186.4 ms