RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 PLD5Q8N7P1 536 aa12.9□□□□□ -0.34
TPM1-220ENST00000559556 ABHD17AQ96GS6 310 aa12.9□□□□□ -0.34
TPM1-220ENST00000559556 ZNF830Q96NB3 372 aaPredicted RBP12.9□□□□□ -0.34
TPM1-220ENST00000559556 RNF157Q96PX1 679 aa12.9□□□□□ -0.34
TPM1-220ENST00000559556 MAGEE1Q9HCI5 957 aa12.9□□□□□ -0.34
TPM1-220ENST00000559556 ZNF71Q9NQZ8 489 aaPredicted RBP12.9□□□□□ -0.34
TPM1-220ENST00000559556 RAD18Q9NS91 495 aa12.9□□□□□ -0.34
TPM1-220ENST00000559556 SCHIP1Q9P0W5 487 aaPredicted RBP12.9□□□□□ -0.34
TPM1-220ENST00000559556 ZNF624Q9P2J8 865 aaPredicted RBP12.9□□□□□ -0.34
TPM1-220ENST00000559556 ANKMY1Q9P2S6 941 aa12.9□□□□□ -0.34
TPM1-220ENST00000559556 SLC23A2Q9UGH3 650 aa12.9□□□□□ -0.34
TPM1-220ENST00000559556 LCMT1Q9UIC8 334 aa12.9□□□□□ -0.34
TPM1-220ENST00000559556 KCTD3Q9Y597 815 aa12.9□□□□□ -0.34
TPM1-220ENST00000559556 KCNMB2Q9Y691 235 aa12.9□□□□□ -0.34
TPM1-220ENST00000559556 SLC30A1Q9Y6M5 507 aa12.9□□□□□ -0.34
TPM1-220ENST00000559556 VIPP01282 170 aa12.89□□□□□ -0.35
TPM1-220ENST00000559556 GYPCP04921 128 aa12.89□□□□□ -0.35
TPM1-220ENST00000559556 ZNF28P17035 718 aa12.89□□□□□ -0.35
TPM1-220ENST00000559556 ZNF7P17097 686 aaPredicted RBP12.89□□□□□ -0.35
TPM1-220ENST00000559556 KDELR1P24390 212 aa12.89□□□□□ -0.35
TPM1-220ENST00000559556 DLSTP36957 453 aa12.89□□□□□ -0.35
TPM1-220ENST00000559556 FANCCQ00597 558 aa12.89□□□□□ -0.35
TPM1-220ENST00000559556 FOXM1Q08050 763 aa12.89□□□□□ -0.35
TPM1-220ENST00000559556 SEPT6Q14141 434 aa12.89□□□□□ -0.35
TPM1-220ENST00000559556 UBAP2LQ14157 1087 aaKnown RBP12.89□□□□□ -0.35
TPM1-220ENST00000559556 IL11RAQ14626 422 aa12.89□□□□□ -0.35
TPM1-220ENST00000559556 NFKBIBQ15653 356 aa12.89□□□□□ -0.35
TPM1-220ENST00000559556 SLC14A2Q15849 920 aa12.89□□□□□ -0.35
TPM1-220ENST00000559556 PLA2G4EQ3MJ16 856 aa12.89□□□□□ -0.35
TPM1-220ENST00000559556 ALS2CLQ60I27 953 aa12.89□□□□□ -0.35
TPM1-220ENST00000559556 CRTC3Q6UUV7 619 aa12.89□□□□□ -0.35
TPM1-220ENST00000559556 PRSS42Q7Z5A4 293 aa12.89□□□□□ -0.35
TPM1-220ENST00000559556 TMC3Q7Z5M5 1100 aa12.89□□□□□ -0.35
TPM1-220ENST00000559556 VSIG1Q86XK7 387 aa12.89□□□□□ -0.35
TPM1-220ENST00000559556 TRIM48Q8IWZ4 208 aa12.89□□□□□ -0.35
TPM1-220ENST00000559556 TADA1Q96BN2 335 aa12.89□□□□□ -0.35
TPM1-220ENST00000559556 IMP4Q96G21 291 aaKnown RBP12.89□□□□□ -0.35
TPM1-220ENST00000559556 TGM7Q96PF1 710 aa12.89□□□□□ -0.35
TPM1-220ENST00000559556 BRD8Q9H0E9 1235 aa12.89□□□□□ -0.35
TPM1-220ENST00000559556 POT1Q9NUX5 634 aa12.89□□□□□ -0.35
TPM1-220ENST00000559556 CTTNBP2NLQ9P2B4 639 aa12.89□□□□□ -0.35
TPM1-220ENST00000559556 ZNF711Q9Y462 761 aa12.89□□□□□ -0.35
TPM1-220ENST00000559556 VEGFDO43915 354 aa12.88□□□□□ -0.35
TPM1-220ENST00000559556 H2AFZP0C0S5 128 aa12.88□□□□□ -0.35
TPM1-220ENST00000559556 PIRTP0C851 137 aa12.88□□□□□ -0.35
TPM1-220ENST00000559556 BRAFP15056 766 aa12.88□□□□□ -0.35
TPM1-220ENST00000559556 TYRP1P17643 537 aa12.88□□□□□ -0.35
TPM1-220ENST00000559556 LEPRP48357 1165 aaKnown RBP12.88□□□□□ -0.35
TPM1-220ENST00000559556 SH3BP2P78314 561 aa12.88□□□□□ -0.35
TPM1-220ENST00000559556 IGFBP7Q16270 282 aa12.88□□□□□ -0.35
TPM1-220ENST00000559556 KHDC1Q4VXA5 237 aaKnown RBP12.88□□□□□ -0.35
TPM1-220ENST00000559556 AGAP9Q5VTM2 703 aa12.88□□□□□ -0.35
TPM1-220ENST00000559556 SLC9A4Q6AI14 798 aa12.88□□□□□ -0.35
TPM1-220ENST00000559556 C16orf46Q6P387 395 aa12.88□□□□□ -0.35
TPM1-220ENST00000559556 ABRAXAS1Q6UWZ7 409 aa12.88□□□□□ -0.35
TPM1-220ENST00000559556 C6orf15Q6UXA7 325 aaPredicted RBP12.88□□□□□ -0.35
TPM1-220ENST00000559556 WASH2PQ6VEQ5 465 aa12.88□□□□□ -0.35
TPM1-220ENST00000559556 H2AFVQ71UI9 128 aa12.88□□□□□ -0.35
TPM1-220ENST00000559556 C11orf96Q7Z7L8 435 aa12.88□□□□□ -0.35
TPM1-220ENST00000559556 ZNF547Q8IVP9 402 aa12.88□□□□□ -0.35
TPM1-220ENST00000559556 RBM12BQ8IXT5 1001 aaKnown RBP12.88□□□□□ -0.35
TPM1-220ENST00000559556 GALNT6Q8NCL4 622 aa12.88□□□□□ -0.35
TPM1-220ENST00000559556 CTNNBL1Q8WYA6 563 aaPredicted RBP12.88□□□□□ -0.35
TPM1-220ENST00000559556 RAPGEF5Q92565 580 aa12.88□□□□□ -0.35
TPM1-220ENST00000559556 RSC1A1Q92681 617 aa12.88□□□□□ -0.35
TPM1-220ENST00000559556 OLFM3Q96PB7 478 aa12.88□□□□□ -0.35
TPM1-220ENST00000559556 VPS35Q96QK1 796 aa12.88□□□□□ -0.35
TPM1-220ENST00000559556 OR6C1Q96RD1 312 aa12.88□□□□□ -0.35
TPM1-220ENST00000559556 CEP41Q9BYV8 373 aa12.88□□□□□ -0.35
TPM1-220ENST00000559556 RAB33BQ9H082 229 aa12.88□□□□□ -0.35
TPM1-220ENST00000559556 SLC25A51Q9H1U9 297 aa12.88□□□□□ -0.35
TPM1-220ENST00000559556 SLC40A1Q9NP59 571 aa12.88□□□□□ -0.35
TPM1-220ENST00000559556 WASH6PQ9NQA3 447 aa12.88□□□□□ -0.35
TPM1-220ENST00000559556 CROTQ9UKG9 612 aa12.88□□□□□ -0.35
TPM1-220ENST00000559556 SHOC2Q9UQ13 582 aa12.88□□□□□ -0.35
TPM1-220ENST00000559556 POLHQ9Y253 713 aa12.88□□□□□ -0.35
TPM1-220ENST00000559556 TP53TG5Q9Y2B4 290 aa12.88□□□□□ -0.35
TPM1-220ENST00000559556 LUC7L2Q9Y383 392 aaKnown RBP12.88□□□□□ -0.35
TPM1-220ENST00000559556 PCDHB3Q9Y5E6 796 aa12.88□□□□□ -0.35
TPM1-220ENST00000559556 HEY1Q9Y5J3 304 aa12.88□□□□□ -0.35
TPM1-220ENST00000559556 HEATR5BQ9P2D3 2071 aa12.88□□□□□ -0.35
TPM1-220ENST00000559556 POLEQ07864 2286 aa12.87□□□□□ -0.35
TPM1-220ENST00000559556 C3orf70A6NLC5 250 aaPredicted RBP12.87□□□□□ -0.35
TPM1-220ENST00000559556 PDZK1P1A8MUH7 402 aa12.87□□□□□ -0.35
TPM1-220ENST00000559556 KIAA0754O94854 1291 aa12.87□□□□□ -0.35
TPM1-220ENST00000559556 NDUFA10O95299 355 aa12.87□□□□□ -0.35
TPM1-220ENST00000559556 SLC4A1P02730 911 aa12.87□□□□□ -0.35
TPM1-220ENST00000559556 FURINP09958 794 aa12.87□□□□□ -0.35
TPM1-220ENST00000559556 FGF5P12034 268 aa12.87□□□□□ -0.35
TPM1-220ENST00000559556 BPIP17213 487 aa12.87□□□□□ -0.35
TPM1-220ENST00000559556 AMD1P17707 334 aa12.87□□□□□ -0.35
TPM1-220ENST00000559556 HNRNPH3P31942 346 aaKnown RBP12.87□□□□□ -0.35
TPM1-220ENST00000559556 SEPHS1P49903 392 aa12.87□□□□□ -0.35
TPM1-220ENST00000559556 UBASH3AP57075 661 aa12.87□□□□□ -0.35
TPM1-220ENST00000559556 AP1B1Q10567 949 aa12.87□□□□□ -0.35
TPM1-220ENST00000559556 KLRB1Q12918 225 aa12.87□□□□□ -0.35
TPM1-220ENST00000559556 GPR18Q14330 331 aa12.87□□□□□ -0.35
TPM1-220ENST00000559556 SEPT7Q16181 437 aaKnown RBP12.87□□□□□ -0.35
TPM1-220ENST00000559556 TCTN3Q6NUS6 607 aa12.87□□□□□ -0.35
TPM1-220ENST00000559556 CAVIN1Q6NZI2 390 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms