RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 SRRM3A6NNA2 597 aaPredicted RBP4.31□□□□□ -1.72
SNX1-205ENST00000559339 PDZK1P1A8MUH7 402 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 D6RAR5 112 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 QSOX1O00391 747 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 NTN3O00634 580 aaPredicted RBP4.31□□□□□ -1.72
SNX1-205ENST00000559339 PLD2O14939 933 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 CHUKO15111 745 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 BUD23O43709 281 aaKnown RBP4.31□□□□□ -1.72
SNX1-205ENST00000559339 DUX1O43812 170 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 BRINP1O60477 761 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 UGT1A9O60656 530 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 POP7O75817 140 aaKnown RBP4.31□□□□□ -1.72
SNX1-205ENST00000559339 DXOO77932 396 aaKnown RBP4.31□□□□□ -1.72
SNX1-205ENST00000559339 VIPP01282 170 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 ITGA2BP08514 1039 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 NUDT7P0C024 238 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 HOXB3P14651 431 aaPredicted RBP4.31□□□□□ -1.72
SNX1-205ENST00000559339 ZNF7P17097 686 aaPredicted RBP4.31□□□□□ -1.72
SNX1-205ENST00000559339 UGT1A6P19224 532 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 UGT1A1P22309 533 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 UGT1A4P22310 534 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 RPL10P27635 214 aaKnown RBP4.31□□□□□ -1.72
SNX1-205ENST00000559339 CCKBRP32239 447 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 CSTF2P33240 577 aaKnown RBP eCLIP4.31□□□□□ -1.72
SNX1-205ENST00000559339 UGT1A3P35503 534 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 UGT1A5P35504 534 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 CLCNKAP51800 687 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 EPHA4P54764 986 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 MAZP56270 477 aaKnown RBP4.31□□□□□ -1.72
SNX1-205ENST00000559339 CLDN6P56747 220 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 PCBP4P57723 403 aaKnown RBP4.31□□□□□ -1.72
SNX1-205ENST00000559339 PRAMEP78395 509 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 CCL7P80098 99 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 BASP1P80723 227 aaKnown RBP4.31□□□□□ -1.72
SNX1-205ENST00000559339 TMPRSS15P98073 1019 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 SEPT6Q14141 434 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 SPARCL1Q14515 664 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 POU6F1Q14863 301 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 NR1D2Q14995 579 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 OASLQ15646 514 aaKnown RBP4.31□□□□□ -1.72
SNX1-205ENST00000559339 CHRNA6Q15825 494 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 SEPT7Q16181 437 aaKnown RBP4.31□□□□□ -1.72
SNX1-205ENST00000559339 TBC1D25Q3MII6 688 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 PLA2G4EQ3MJ16 856 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 GPR33Q49SQ1 333 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 ZRANB3Q5FWF4 1079 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 C3orf38Q5JPI3 329 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 FNBP1LQ5T0N5 605 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 PHF19Q5T6S3 580 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 GPRC6AQ5T6X5 926 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 LYPLAL1Q5VWZ2 237 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 KCTD11Q693B1 232 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 KLHL35Q6PF15 583 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 FOXR1Q6PIV2 292 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 CERS6Q6ZMG9 384 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 NYAP1Q6ZVC0 841 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 USP53Q70EK8 1073 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 RAB11FIP2Q7L804 512 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 TAS2R42Q7RTR8 314 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 ZNF438Q7Z4V0 828 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 SNX20Q7Z614 316 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 C17orf82Q86X59 251 aaPredicted RBP4.31□□□□□ -1.72
SNX1-205ENST00000559339 MARCH9Q86YJ5 346 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 PLXDC1Q8IUK5 500 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 RBM12BQ8IXT5 1001 aaKnown RBP4.31□□□□□ -1.72
SNX1-205ENST00000559339 FBXO39Q8N4B4 442 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 TTC30BQ8N4P2 665 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 TAB3Q8N5C8 712 aaPredicted RBP4.31□□□□□ -1.72
SNX1-205ENST00000559339 ZNF248Q8NDW4 579 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 OR4D9Q8NGE8 314 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 SLC37A2Q8TED4 501 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 GRK7Q8WTQ7 553 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 STYXQ8WUJ0 223 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 PEX13Q92968 403 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 CXorf40BQ96DE9 158 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 ATXN7L3BQ96GX2 97 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 LIN37Q96GY3 246 aaPredicted RBP4.31□□□□□ -1.72
SNX1-205ENST00000559339 PBKQ96KB5 322 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 COPS8Q99627 209 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 GORASP1Q9BQQ3 440 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 TLR10Q9BXR5 811 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 EPB41L1Q9H4G0 881 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 UGT1A7Q9HAW7 530 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 UGT1A10Q9HAW8 530 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 UGT1A8Q9HAW9 530 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 RDH14Q9HBH5 336 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 ETNK1Q9HBU6 452 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 ARFGAP3Q9NP61 516 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 SARS2Q9NP81 518 aaKnown RBP4.31□□□□□ -1.72
SNX1-205ENST00000559339 PRDM8Q9NQV8 689 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 POT1Q9NUX5 634 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 BFARQ9NZS9 450 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 TBC1D29Q9UFV1 150 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 ANAPC5Q9UJX4 755 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 SATB2Q9UPW6 733 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 DRG1Q9Y295 367 aaKnown RBP4.31□□□□□ -1.72
SNX1-205ENST00000559339 DNAJC16Q9Y2G8 782 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 RAXQ9Y2V3 346 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 PCDHB1Q9Y5F3 818 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 ENTPD2Q9Y5L3 495 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms