RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 CBLBQ13191 982 aa11.28□□□□□ -0.6
SNX1-204ENST00000559061 ITGA9Q13797 1035 aa11.28□□□□□ -0.6
SNX1-204ENST00000559061 FASTKD3Q14CZ7 662 aaKnown RBP11.28□□□□□ -0.6
SNX1-204ENST00000559061 MORF4L2Q15014 288 aa11.28□□□□□ -0.6
SNX1-204ENST00000559061 TRIP6Q15654 476 aaKnown RBP11.28□□□□□ -0.6
SNX1-204ENST00000559061 PPM1JQ5JR12 505 aa11.28□□□□□ -0.6
SNX1-204ENST00000559061 OGFOD3Q6PK18 319 aa11.28□□□□□ -0.6
SNX1-204ENST00000559061 SLC30A9Q6PML9 568 aa11.28□□□□□ -0.6
SNX1-204ENST00000559061 DET1Q7L5Y6 550 aa11.28□□□□□ -0.6
SNX1-204ENST00000559061 TMEM135Q86UB9 458 aa11.28□□□□□ -0.6
SNX1-204ENST00000559061 SERPINA9Q86WD7 417 aa11.28□□□□□ -0.6
SNX1-204ENST00000559061 GALNT13Q8IUC8 556 aa11.28□□□□□ -0.6
SNX1-204ENST00000559061 NAGSQ8N159 534 aa11.28□□□□□ -0.6
SNX1-204ENST00000559061 LILRA3Q8N6C8 439 aaPredicted RBP11.28□□□□□ -0.6
SNX1-204ENST00000559061 PPHLN1Q8NEY8 458 aaKnown RBP11.28□□□□□ -0.6
SNX1-204ENST00000559061 GPR156Q8NFN8 814 aa11.28□□□□□ -0.6
SNX1-204ENST00000559061 SEC14L1Q92503 715 aa11.28□□□□□ -0.6
SNX1-204ENST00000559061 PEX13Q92968 403 aa11.28□□□□□ -0.6
SNX1-204ENST00000559061 LRRC45Q96CN5 670 aa11.28□□□□□ -0.6
SNX1-204ENST00000559061 SNF8Q96H20 258 aa11.28□□□□□ -0.6
SNX1-204ENST00000559061 CNDP2Q96KP4 475 aaKnown RBP11.28□□□□□ -0.6
SNX1-204ENST00000559061 ERP44Q9BS26 406 aa11.28□□□□□ -0.6
SNX1-204ENST00000559061 LRRC1Q9BTT6 524 aa11.28□□□□□ -0.6
SNX1-204ENST00000559061 DPH5Q9H2P9 285 aa11.28□□□□□ -0.6
SNX1-204ENST00000559061 RMI1Q9H9A7 625 aa11.28□□□□□ -0.6
SNX1-204ENST00000559061 XAB2Q9HCS7 855 aaKnown RBP11.28□□□□□ -0.6
SNX1-204ENST00000559061 BFARQ9NZS9 450 aa11.28□□□□□ -0.6
SNX1-204ENST00000559061 SCHIP1Q9P0W5 487 aaPredicted RBP11.28□□□□□ -0.6
SNX1-204ENST00000559061 TAAR2Q9P1P5 351 aa11.28□□□□□ -0.6
SNX1-204ENST00000559061 TBC1D29Q9UFV1 150 aa11.28□□□□□ -0.6
SNX1-204ENST00000559061 APPL1Q9UKG1 709 aa11.28□□□□□ -0.6
SNX1-204ENST00000559061 KCNK6Q9Y257 313 aa11.28□□□□□ -0.6
SNX1-204ENST00000559061 GPSM3Q9Y4H4 160 aa11.28□□□□□ -0.6
SNX1-204ENST00000559061 SPTBN2O15020 2390 aa11.27□□□□□ -0.6
SNX1-204ENST00000559061 FAM237BA0A1B0GVD1 139 aa11.27□□□□□ -0.61
SNX1-204ENST00000559061 OR2AG2A6NM03 316 aa11.27□□□□□ -0.61
SNX1-204ENST00000559061 EFCAB8A8MWE9 144 aa11.27□□□□□ -0.61
SNX1-204ENST00000559061 GOLGA8KD6RF30 607 aa11.27□□□□□ -0.61
SNX1-204ENST00000559061 E7ESA3 106 aa11.27□□□□□ -0.61
SNX1-204ENST00000559061 GOLGA8TH3BQL2 631 aa11.27□□□□□ -0.61
SNX1-204ENST00000559061 KIF2AO00139 706 aaPredicted RBP11.27□□□□□ -0.61
SNX1-204ENST00000559061 CDK14O94921 469 aa11.27□□□□□ -0.61
SNX1-204ENST00000559061 TUBB4AP04350 444 aa11.27□□□□□ -0.61
SNX1-204ENST00000559061 FTH1P19P0C7X4 201 aa11.27□□□□□ -0.61
SNX1-204ENST00000559061 CKMT1AP12532 417 aa11.27□□□□□ -0.61
SNX1-204ENST00000559061 BRAFP15056 766 aa11.27□□□□□ -0.61
SNX1-204ENST00000559061 ITGALP20701 1170 aa11.27□□□□□ -0.61
SNX1-204ENST00000559061 SLC7A5Q01650 507 aa11.27□□□□□ -0.61
SNX1-204ENST00000559061 CKAP4Q07065 602 aaKnown RBP11.27□□□□□ -0.61
SNX1-204ENST00000559061 HLTFQ14527 1009 aaKnown RBP eCLIP11.27□□□□□ -0.61
SNX1-204ENST00000559061 SUZ12Q15022 739 aaKnown RBP11.27□□□□□ -0.61
SNX1-204ENST00000559061 ELOCQ15369 112 aa11.27□□□□□ -0.61
SNX1-204ENST00000559061 SKIDA1Q1XH10 827 aa11.27□□□□□ -0.61
SNX1-204ENST00000559061 ANKRD20A4Q4UJ75 823 aa11.27□□□□□ -0.61
SNX1-204ENST00000559061 BCL7AQ4VC05 210 aa11.27□□□□□ -0.61
SNX1-204ENST00000559061 ZRANB3Q5FWF4 1079 aa11.27□□□□□ -0.61
SNX1-204ENST00000559061 PERM1Q5SV97 790 aa11.27□□□□□ -0.61
SNX1-204ENST00000559061 LDLRAP1Q5SW96 308 aa11.27□□□□□ -0.61
SNX1-204ENST00000559061 N4BP2L1Q5TBK1 243 aaPredicted RBP11.27□□□□□ -0.61
SNX1-204ENST00000559061 KIAA0930Q6ICG6 404 aaPredicted RBP11.27□□□□□ -0.61
SNX1-204ENST00000559061 ZCCHC8Q6NZY4 707 aaKnown RBP11.27□□□□□ -0.61
SNX1-204ENST00000559061 GUSBP11Q6P575 273 aa11.27□□□□□ -0.61
SNX1-204ENST00000559061 AFTPHQ6ULP2 937 aa11.27□□□□□ -0.61
SNX1-204ENST00000559061 CHST15Q7LFX5 561 aaPredicted RBP11.27□□□□□ -0.61
SNX1-204ENST00000559061 MMGT1Q8N4V1 131 aa11.27□□□□□ -0.61
SNX1-204ENST00000559061 LKAAEAR1Q8TD35 194 aa11.27□□□□□ -0.61
SNX1-204ENST00000559061 SGF29Q96ES7 293 aa11.27□□□□□ -0.61
SNX1-204ENST00000559061 ZDHHC3Q9NYG2 299 aa11.27□□□□□ -0.61
SNX1-204ENST00000559061 SIRPGQ9P1W8 387 aa11.27□□□□□ -0.61
SNX1-204ENST00000559061 FTSJ1Q9UET6 329 aa11.27□□□□□ -0.61
SNX1-204ENST00000559061 ZNHIT2Q9UHR6 403 aa11.27□□□□□ -0.61
SNX1-204ENST00000559061 CRLS1Q9UJA2 301 aa11.27□□□□□ -0.61
SNX1-204ENST00000559061 ESYT3A0FGR9 886 aa11.26□□□□□ -0.61
SNX1-204ENST00000559061 MED19A0JLT2 244 aaPredicted RBP11.26□□□□□ -0.61
SNX1-204ENST00000559061 SDR42E2A6NKP2 422 aa11.26□□□□□ -0.61
SNX1-204ENST00000559061 B4DGG1 531 aa11.26□□□□□ -0.61
SNX1-204ENST00000559061 GPR89AB7ZAQ6 455 aa11.26□□□□□ -0.61
SNX1-204ENST00000559061 TNFSF14O43557 240 aa11.26□□□□□ -0.61
SNX1-204ENST00000559061 LDOC1O95751 146 aaPredicted RBP11.26□□□□□ -0.61
SNX1-204ENST00000559061 ANXA6P08133 673 aa11.26□□□□□ -0.61
SNX1-204ENST00000559061 GPR89BP0CG08 455 aa11.26□□□□□ -0.61
SNX1-204ENST00000559061 CTSEP14091 401 aa11.26□□□□□ -0.61
SNX1-204ENST00000559061 ZNF7P17097 686 aaPredicted RBP11.26□□□□□ -0.61
SNX1-204ENST00000559061 SDHBP21912 280 aa11.26□□□□□ -0.61
SNX1-204ENST00000559061 ACP1P24666 158 aa11.26□□□□□ -0.61
SNX1-204ENST00000559061 ECHS1P30084 290 aa11.26□□□□□ -0.61
SNX1-204ENST00000559061 ACTR1BP42025 376 aa11.26□□□□□ -0.61
SNX1-204ENST00000559061 PRLHRP49683 370 aa11.26□□□□□ -0.61
SNX1-204ENST00000559061 CLCNKAP51800 687 aa11.26□□□□□ -0.61
SNX1-204ENST00000559061 MAZP56270 477 aaKnown RBP11.26□□□□□ -0.61
SNX1-204ENST00000559061 ACTR1AP61163 376 aa11.26□□□□□ -0.61
SNX1-204ENST00000559061 SIM1P81133 766 aaPredicted RBP11.26□□□□□ -0.61
SNX1-204ENST00000559061 DMPKQ09013 629 aa11.26□□□□□ -0.61
SNX1-204ENST00000559061 TYSND1Q2T9J0 566 aa11.26□□□□□ -0.61
SNX1-204ENST00000559061 GPR33Q49SQ1 333 aa11.26□□□□□ -0.61
SNX1-204ENST00000559061 ZNF789Q5FWF6 425 aa11.26□□□□□ -0.61
SNX1-204ENST00000559061 HP1BP3Q5SSJ5 553 aaPredicted RBP11.26□□□□□ -0.61
SNX1-204ENST00000559061 UBAP2Q5T6F2 1119 aaKnown RBP11.26□□□□□ -0.61
SNX1-204ENST00000559061 LVRNQ6Q4G3 990 aa11.26□□□□□ -0.61
SNX1-204ENST00000559061 TMEM220Q6QAJ8 160 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms