RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 PLEKHA7Q6IQ23 1121 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 PPP1R2P3Q6NXS1 205 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 MACC1Q6ZN28 852 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 LUZP1Q86V48 1076 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 ZSCAN30Q86W11 494 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 JAMLQ86YT9 394 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 SLC35F3Q8IY50 421 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 LINC00482Q8N8I6 264 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 Q8N9G6 341 aaPredicted RBP7.35□□□□□ -1.23
SPG11-213ENST00000558988 KYQ8NBH2 561 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 BTN2A2Q8WVV5 523 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 FGF11Q92914 225 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 VOPP1Q96AW1 172 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 FCRL3Q96P31 734 aaPredicted RBP7.35□□□□□ -1.23
SPG11-213ENST00000558988 BBC3Q96PG8 261 aaPredicted RBP7.35□□□□□ -1.23
SPG11-213ENST00000558988 SYT11Q9BT88 431 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 LRRC19Q9H756 370 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 GPR27Q9NS67 375 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.35□□□□□ -1.23
SPG11-213ENST00000558988 CWC15Q9P013 229 aaKnown RBP7.35□□□□□ -1.23
SPG11-213ENST00000558988 DKK3Q9UBP4 350 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 VTI1BQ9UEU0 232 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 PADI4Q9UM07 663 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 GPR34Q9UPC5 381 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 SATB2Q9UPW6 733 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 TTLL3Q9Y4R7 772 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 SCINQ9Y6U3 715 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 LRRK1Q38SD2 2015 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 CHD6Q8TD26 2715 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 CXorf51AA0A1B0GTR3 108 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 B4DGG1 531 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 YY2O15391 372 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 KLK10O43240 276 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 LRCH4O75427 683 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 RECQL5O94762 991 aaPredicted RBP7.34□□□□□ -1.23
SPG11-213ENST00000558988 TACR1P25103 407 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 IL1R2P27930 398 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 RBMS1P29558 406 aaKnown RBP7.34□□□□□ -1.23
SPG11-213ENST00000558988 MMP12P39900 470 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 HK3P52790 923 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 SRP54P61011 504 aaKnown RBP7.34□□□□□ -1.23
SPG11-213ENST00000558988 MAXP61244 160 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 TPM4P67936 248 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 ITKQ08881 620 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 SLC10A7Q0GE19 358 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 SPIDRQ14159 915 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 GRM3Q14832 879 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 NFATC4Q14934 902 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 ISXQ2M1V0 245 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 CDCP2Q5VXM1 449 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 IGFL4Q6B9Z1 124 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 TXNRD3NBQ6F5E7 133 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 ESRP1Q6NXG1 681 aaKnown RBP7.34□□□□□ -1.23
SPG11-213ENST00000558988 BRAT1Q6PJG6 821 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 TMCO3Q6UWJ1 677 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 RBM44Q6ZP01 1051 aaKnown RBP7.34□□□□□ -1.23
SPG11-213ENST00000558988 TAF8Q7Z7C8 310 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 ARHGAP12Q8IWW6 846 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 SDR16C5Q8N3Y7 309 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 ATPAF2Q8N5M1 289 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 PLA2G15Q8NCC3 412 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 KCNE4Q8WWG9 221 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 ASB12Q8WXK4 309 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 RFFLQ8WZ73 363 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 PDXPQ96GD0 296 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 VCPIP1Q96JH7 1222 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 WDR92Q96MX6 357 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 ZNF641Q96N77 438 aaPredicted RBP7.34□□□□□ -1.23
SPG11-213ENST00000558988 TUBGCP5Q96RT8 1024 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 CCDC3Q9BQI4 270 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 APOOQ9BUR5 198 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 CPEB1Q9BZB8 566 aaKnown RBP7.34□□□□□ -1.23
SPG11-213ENST00000558988 CLPBQ9H078 707 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 THAP2Q9H0W7 228 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 POLR1BQ9H9Y6 1135 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 EPB41L5Q9HCM4 733 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 MRPL47Q9HD33 250 aaKnown RBP7.34□□□□□ -1.23
SPG11-213ENST00000558988 MRPL40Q9NQ50 206 aaKnown RBP7.34□□□□□ -1.23
SPG11-213ENST00000558988 IGSF5Q9NSI5 407 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 DONSONQ9NYP3 566 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 AIPL1Q9NZN9 384 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 NCKIPSDQ9NZQ3 722 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 ANAPC7Q9UJX3 599 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 MYO6Q9UM54 1294 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 CSNK1G3Q9Y6M4 447 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 RP1P56715 2156 aa7.34□□□□□ -1.23
SPG11-213ENST00000558988 ANKRD11Q6UB99 2663 aaPredicted RBP7.34□□□□□ -1.24
SPG11-213ENST00000558988 SHROOM3Q8TF72 1996 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 A0A0U1RQS6 177 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 EME2A4GXA9 379 aaPredicted RBP7.33□□□□□ -1.24
SPG11-213ENST00000558988 TMEM110-MUSTN1A8MSY1 372 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 LMO7DNF2Z398 122 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 GOLGA6L19H0YKK7 550 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 CACNB4O00305 520 aaPredicted RBP7.33□□□□□ -1.24
SPG11-213ENST00000558988 CPP00450 1065 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 TNFP01375 233 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 RPLP0P05388 317 aaKnown RBP7.33□□□□□ -1.24
SPG11-213ENST00000558988 GP1BAP07359 652 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 ALPIP09923 528 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 CTPS1P17812 591 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms