RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 ADRA1AP35348 466 aa16.77■□□□□ 0.28
LRRC28-210ENST00000558879 ATP5OP48047 213 aa16.77■□□□□ 0.28
LRRC28-210ENST00000558879 MAPK10P53779 464 aa16.77■□□□□ 0.28
LRRC28-210ENST00000558879 GEMP55040 296 aa16.77■□□□□ 0.28
LRRC28-210ENST00000558879 RWDD2BP57060 319 aa16.77■□□□□ 0.28
LRRC28-210ENST00000558879 INSCQ1MX18 579 aa16.77■□□□□ 0.28
LRRC28-210ENST00000558879 PLA2G4EQ3MJ16 856 aa16.77■□□□□ 0.28
LRRC28-210ENST00000558879 ITPRIPL1Q6GPH6 555 aa16.77■□□□□ 0.28
LRRC28-210ENST00000558879 AADACL2Q6P093 401 aa16.77■□□□□ 0.28
LRRC28-210ENST00000558879 WDR74Q6RFH5 385 aaPredicted RBP16.77■□□□□ 0.28
LRRC28-210ENST00000558879 KLHDC8BQ8IXV7 354 aa16.77■□□□□ 0.28
LRRC28-210ENST00000558879 SLC25A41Q8N5S1 370 aa16.77■□□□□ 0.28
LRRC28-210ENST00000558879 OR10G6Q8NH81 332 aa16.77■□□□□ 0.28
LRRC28-210ENST00000558879 SLC39A7Q92504 469 aa16.77■□□□□ 0.28
LRRC28-210ENST00000558879 SH3KBP1Q96B97 665 aa16.77■□□□□ 0.28
LRRC28-210ENST00000558879 CCNL2Q96S94 520 aaPredicted RBP16.77■□□□□ 0.28
LRRC28-210ENST00000558879 BAG1Q99933 345 aaPredicted RBP16.77■□□□□ 0.28
LRRC28-210ENST00000558879 UCK1Q9HA47 277 aa16.77■□□□□ 0.28
LRRC28-210ENST00000558879 PRDM8Q9NQV8 689 aa16.77■□□□□ 0.28
LRRC28-210ENST00000558879 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.77■□□□□ 0.28
LRRC28-210ENST00000558879 AKAP7Q9P0M2 348 aaPredicted RBP16.77■□□□□ 0.28
LRRC28-210ENST00000558879 SCHIP1Q9P0W5 487 aaPredicted RBP16.77■□□□□ 0.28
LRRC28-210ENST00000558879 CPNE7Q9UBL6 633 aa16.77■□□□□ 0.28
LRRC28-210ENST00000558879 PCDHGA3Q9Y5H0 932 aa16.77■□□□□ 0.28
LRRC28-210ENST00000558879 KALRNO60229 2985 aa16.77■□□□□ 0.27
LRRC28-210ENST00000558879 MN1Q10571 1320 aaPredicted RBP16.76■□□□□ 0.27
LRRC28-210ENST00000558879 MACROD2A1Z1Q3 448 aa16.76■□□□□ 0.27
LRRC28-210ENST00000558879 AGRPO00253 132 aa16.76■□□□□ 0.27
LRRC28-210ENST00000558879 EFSO43281 561 aa16.76■□□□□ 0.27
LRRC28-210ENST00000558879 SNX2O60749 519 aa16.76■□□□□ 0.27
LRRC28-210ENST00000558879 PPFIA2O75334 1257 aa16.76■□□□□ 0.27
LRRC28-210ENST00000558879 ANXA9O76027 345 aa16.76■□□□□ 0.27
LRRC28-210ENST00000558879 RBP3P10745 1247 aa16.76■□□□□ 0.27
LRRC28-210ENST00000558879 PYGMP11217 842 aa16.76■□□□□ 0.27
LRRC28-210ENST00000558879 BRAFP15056 766 aa16.76■□□□□ 0.27
LRRC28-210ENST00000558879 PSMB4P28070 264 aa16.76■□□□□ 0.27
LRRC28-210ENST00000558879 CA5AP35218 305 aa16.76■□□□□ 0.27
LRRC28-210ENST00000558879 TNNT3P45378 269 aaPredicted RBP16.76■□□□□ 0.27
LRRC28-210ENST00000558879 EIF3EP60228 445 aaKnown RBP16.76■□□□□ 0.27
LRRC28-210ENST00000558879 NFATC2Q13469 925 aa16.76■□□□□ 0.27
LRRC28-210ENST00000558879 TGIF1Q15583 401 aa16.76■□□□□ 0.27
LRRC28-210ENST00000558879 ANKRD20A2Q5SQ80 823 aa16.76■□□□□ 0.27
LRRC28-210ENST00000558879 ANKRD20A1Q5TYW2 823 aa16.76■□□□□ 0.27
LRRC28-210ENST00000558879 ANKRD20A3Q5VUR7 823 aa16.76■□□□□ 0.27
LRRC28-210ENST00000558879 CCDC81Q6ZN84 652 aa16.76■□□□□ 0.27
LRRC28-210ENST00000558879 BMPERQ8N8U9 685 aa16.76■□□□□ 0.27
LRRC28-210ENST00000558879 AGBL5Q8NDL9 886 aa16.76■□□□□ 0.27
LRRC28-210ENST00000558879 DDHD1Q8NEL9 900 aa16.76■□□□□ 0.27
LRRC28-210ENST00000558879 BLOC1S5Q8TDH9 187 aa16.76■□□□□ 0.27
LRRC28-210ENST00000558879 PMEPA1Q969W9 287 aa16.76■□□□□ 0.27
LRRC28-210ENST00000558879 WBP1Q96G27 269 aa16.76■□□□□ 0.27
LRRC28-210ENST00000558879 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.76■□□□□ 0.27
LRRC28-210ENST00000558879 OSGEPL1Q9H4B0 414 aa16.76■□□□□ 0.27
LRRC28-210ENST00000558879 EPB41L1Q9H4G0 881 aa16.76■□□□□ 0.27
LRRC28-210ENST00000558879 GLYATL1P3A0A0U1RQE8 302 aa16.75■□□□□ 0.27
LRRC28-210ENST00000558879 A0A0U1RQJ8 604 aa16.75■□□□□ 0.27
LRRC28-210ENST00000558879 CDK14O94921 469 aa16.75■□□□□ 0.27
LRRC28-210ENST00000558879 XRCC1P18887 633 aaPredicted RBP16.75■□□□□ 0.27
LRRC28-210ENST00000558879 NAP1L1P55209 391 aaKnown RBP16.75■□□□□ 0.27
LRRC28-210ENST00000558879 TMEM115Q12893 351 aaPredicted RBP16.75■□□□□ 0.27
LRRC28-210ENST00000558879 SRSF6Q13247 344 aaKnown RBP16.75■□□□□ 0.27
LRRC28-210ENST00000558879 MSLNQ13421 630 aaPredicted RBP16.75■□□□□ 0.27
LRRC28-210ENST00000558879 ITGA9Q13797 1035 aa16.75■□□□□ 0.27
LRRC28-210ENST00000558879 CCDC181Q5TID7 509 aa16.75■□□□□ 0.27
LRRC28-210ENST00000558879 ABRAXAS1Q6UWZ7 409 aa16.75■□□□□ 0.27
LRRC28-210ENST00000558879 WASH2PQ6VEQ5 465 aa16.75■□□□□ 0.27
LRRC28-210ENST00000558879 RANBP10Q6VN20 620 aa16.75■□□□□ 0.27
LRRC28-210ENST00000558879 ARHGAP22Q7Z5H3 698 aa16.75■□□□□ 0.27
LRRC28-210ENST00000558879 ZFAND4Q86XD8 727 aa16.75■□□□□ 0.27
LRRC28-210ENST00000558879 AHCYL2Q96HN2 611 aaKnown RBP16.75■□□□□ 0.27
LRRC28-210ENST00000558879 SPATA13Q96N96 652 aa16.75■□□□□ 0.27
LRRC28-210ENST00000558879 FAM118BQ9BPY3 351 aa16.75■□□□□ 0.27
LRRC28-210ENST00000558879 FICDQ9BVA6 458 aa16.75■□□□□ 0.27
LRRC28-210ENST00000558879 DDA1Q9BW61 102 aa16.75■□□□□ 0.27
LRRC28-210ENST00000558879 WASH6PQ9NQA3 447 aa16.75■□□□□ 0.27
LRRC28-210ENST00000558879 ZNF624Q9P2J8 865 aaPredicted RBP16.75■□□□□ 0.27
LRRC28-210ENST00000558879 IMPACTQ9P2X3 320 aa16.75■□□□□ 0.27
LRRC28-210ENST00000558879 TRIM10Q9UDY6 481 aa16.75■□□□□ 0.27
LRRC28-210ENST00000558879 B4E171 279 aa16.74■□□□□ 0.27
LRRC28-210ENST00000558879 DDX3YO15523 660 aaKnown RBP16.74■□□□□ 0.27
LRRC28-210ENST00000558879 KCNN4O15554 427 aa16.74■□□□□ 0.27
LRRC28-210ENST00000558879 TJP3O95049 919 aa16.74■□□□□ 0.27
LRRC28-210ENST00000558879 AGTP01019 485 aa16.74■□□□□ 0.27
LRRC28-210ENST00000558879 PRB1P04280 392 aa16.74■□□□□ 0.27
LRRC28-210ENST00000558879 MPSTP25325 297 aa16.74■□□□□ 0.27
LRRC28-210ENST00000558879 SLC19A1P41440 591 aa16.74■□□□□ 0.27
LRRC28-210ENST00000558879 TSPAN7P41732 249 aa16.74■□□□□ 0.27
LRRC28-210ENST00000558879 DMPKQ09013 629 aa16.74■□□□□ 0.27
LRRC28-210ENST00000558879 KLF1Q13351 362 aaPredicted RBP16.74■□□□□ 0.27
LRRC28-210ENST00000558879 OLIG2Q13516 323 aa16.74■□□□□ 0.27
LRRC28-210ENST00000558879 CHRNA6Q15825 494 aa16.74■□□□□ 0.27
LRRC28-210ENST00000558879 LDLRAP1Q5SW96 308 aa16.74■□□□□ 0.27
LRRC28-210ENST00000558879 AGAP9Q5VTM2 703 aa16.74■□□□□ 0.27
LRRC28-210ENST00000558879 FAM151BQ6UXP7 276 aa16.74■□□□□ 0.27
LRRC28-210ENST00000558879 KIAA1328Q86T90 577 aa16.74■□□□□ 0.27
LRRC28-210ENST00000558879 BRSK1Q8TDC3 778 aa16.74■□□□□ 0.27
LRRC28-210ENST00000558879 TAAR9Q96RI9 348 aa16.74■□□□□ 0.27
LRRC28-210ENST00000558879 FERMT1Q9BQL6 677 aa16.74■□□□□ 0.27
LRRC28-210ENST00000558879 TBC1D10AQ9BXI6 508 aa16.74■□□□□ 0.27
LRRC28-210ENST00000558879 ZCCHC2Q9C0B9 1178 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms