RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	LIN37	Q96GY3	246 aa	Predicted RBP	6.96	□□□□□ -1.3
MARK3-215	ENST00000558787	MCCC1	Q96RQ3	725 aa	Predicted RBP	6.96	□□□□□ -1.3
MARK3-215	ENST00000558787	DNAJC7	Q99615	494 aa		6.96	□□□□□ -1.3
MARK3-215	ENST00000558787	NUDT22	Q9BRQ3	303 aa		6.96	□□□□□ -1.3
MARK3-215	ENST00000558787	FRMD8	Q9BZ67	464 aa	Predicted RBP	6.96	□□□□□ -1.3
MARK3-215	ENST00000558787	BHLHE41	Q9C0J9	482 aa	Predicted RBP	6.96	□□□□□ -1.3
MARK3-215	ENST00000558787	STRADB	Q9C0K7	418 aa		6.96	□□□□□ -1.3
MARK3-215	ENST00000558787	PHPT1	Q9NRX4	125 aa	Predicted RBP	6.96	□□□□□ -1.3
MARK3-215	ENST00000558787	ABHD10	Q9NUJ1	306 aa		6.96	□□□□□ -1.3
MARK3-215	ENST00000558787	RBM22	Q9NW64	420 aa	Known RBP eCLIP	6.96	□□□□□ -1.3
MARK3-215	ENST00000558787	FOXJ2	Q9P0K8	574 aa		6.96	□□□□□ -1.3
MARK3-215	ENST00000558787	APPL1	Q9UKG1	709 aa		6.96	□□□□□ -1.3
MARK3-215	ENST00000558787	PHTF1	Q9UMS5	762 aa		6.96	□□□□□ -1.3
MARK3-215	ENST00000558787	PRKAB1	Q9Y478	270 aa		6.96	□□□□□ -1.3
MARK3-215	ENST00000558787	LOXL2	Q9Y4K0	774 aa		6.96	□□□□□ -1.3
MARK3-215	ENST00000558787	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	6.96	□□□□□ -1.3
MARK3-215	ENST00000558787	BZW2	Q9Y6E2	419 aa	Known RBP	6.96	□□□□□ -1.3
MARK3-215	ENST00000558787	PRAMEF33	A0A0G2JMD5	474 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	LOC100289279	A0A1B0GTE1	492 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	RHPN2P1	A8MT19	583 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	TMX2-CTNND1	H3BSU7	103 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787		K7ENP7	123 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	PPM1D	O15297	605 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	INPP4B	O15327	924 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	FZD6	O60353	706 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	PRAMEF10	O60809	474 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	CLDN7	O95471	211 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	EML2	O95834	649 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	SOD1	P00441	154 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	PRL	P01236	227 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	HLA-DQB2	P05538	268 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	JMJD7	P0C870	316 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	ESRRA	P11474	423 aa	Predicted RBP	6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	PLA2G2A	P14555	144 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	WT1	P19544	449 aa	Predicted RBP	6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	CD1C	P29017	333 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	HNRNPH3	P31942	346 aa	Known RBP	6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	CCKBR	P32239	447 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	SERPINB6	P35237	376 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	HSPA9	P38646	679 aa	Known RBP	6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	GARS	P41250	739 aa	Known RBP	6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	GPR1	P46091	355 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	UCN	P55089	124 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	RHD	Q02161	417 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	GSTM4	Q03013	218 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	GALNT2	Q10471	571 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	C16orf72	Q14CZ0	275 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	PAFAH1B3	Q15102	231 aa	Known RBP	6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	HADH	Q16836	314 aa	Known RBP	6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	ANKRD20A8P	Q5CZ79	823 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	LCE3B	Q5TA77	95 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	INO80C	Q6PI98	192 aa	Predicted RBP	6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	USP45	Q70EL2	814 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	KDELC2	Q7Z4H8	507 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	ZNF605	Q86T29	641 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	VASH2	Q86V25	355 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	ZNF761	Q86XN6	746 aa	Predicted RBP	6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	TMTC1	Q8IUR5	882 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	SLITRK4	Q8IW52	837 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	BBS5	Q8N3I7	341 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	PQLC3	Q8N755	202 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	TC2N	Q8N9U0	490 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	OR6C4	Q8NGE1	309 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	ARRDC2	Q8TBH0	407 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	ZNF564	Q8TBZ8	553 aa	Predicted RBP	6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	FAM71B	Q8TC56	605 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	JPH3	Q8WXH2	748 aa	Predicted RBP	6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	RAPGEF5	Q92565	580 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	USP7	Q93009	1102 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	AP2M1	Q96CW1	435 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	TMEM74	Q96NL1	305 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	CCNL2	Q96S94	520 aa	Predicted RBP	6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	RIOK2	Q9BVS4	552 aa	Known RBP	6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	GSDMC	Q9BYG8	508 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	TMEM9	Q9P0T7	183 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	CTTNBP2NL	Q9P2B4	639 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	NENF	Q9UMX5	172 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	SLC17A4	Q9Y2C5	497 aa		6.95	□□□□□ -1.3
MARK3-215	ENST00000558787	TLN1	Q9Y490	2541 aa	Known RBP	6.94	□□□□□ -1.3
MARK3-215	ENST00000558787		A0A0J9YYE9	177 aa		6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	FAM95C	A0A1B0GW59	222 aa		6.94	□□□□□ -1.3
MARK3-215	ENST00000558787		A0A1W2PQ67	120 aa		6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	KCNK1	O00180	336 aa		6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	MATN3	O15232	486 aa		6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	NUDT21	O43809	227 aa	Known RBP	6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	PROSC	O94903	275 aa		6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	ASMTL	O95671	621 aa		6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	JCHAIN	P01591	159 aa		6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	TRBC1	P01850	177 aa		6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	ATP1A1	P05023	1023 aa	Known RBP	6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	IVL	P07476	585 aa		6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	ACTR1B	P42025	376 aa		6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	STC1	P52823	247 aa		6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	EPHB1	P54762	984 aa		6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	ACTR1A	P61163	376 aa		6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	CYP4F2	P78329	520 aa		6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	ILF3	Q12906	894 aa	Known RBP eCLIP	6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	BIRC2	Q13490	618 aa		6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	MESD	Q14696	234 aa		6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	MAP9	Q49MG5	647 aa		6.94	□□□□□ -1.3

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