RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 LRRC39Q96DD0 335 aa17.24■□□□□ 0.35
TPM1-214ENST00000558544 TTC25Q96NG3 672 aa17.24■□□□□ 0.35
TPM1-214ENST00000558544 OR2M4Q96R27 311 aa17.24■□□□□ 0.35
TPM1-214ENST00000558544 COPS8Q99627 209 aa17.24■□□□□ 0.35
TPM1-214ENST00000558544 ZCCHC2Q9C0B9 1178 aaKnown RBP17.24■□□□□ 0.35
TPM1-214ENST00000558544 CLPBQ9H078 707 aa17.24■□□□□ 0.35
TPM1-214ENST00000558544 SAYSD1Q9NPB0 183 aa17.24■□□□□ 0.35
TPM1-214ENST00000558544 ZDHHC18Q9NUE0 388 aa17.24■□□□□ 0.35
TPM1-214ENST00000558544 ZDHHC3Q9NYG2 299 aa17.24■□□□□ 0.35
TPM1-214ENST00000558544 MARCH4Q9P2E8 410 aaPredicted RBP17.24■□□□□ 0.35
TPM1-214ENST00000558544 CD3EAPO15446 510 aaKnown RBP17.23■□□□□ 0.35
TPM1-214ENST00000558544 ARCN1P48444 511 aaKnown RBP17.23■□□□□ 0.35
TPM1-214ENST00000558544 ARHGAP8P85298 464 aa17.23■□□□□ 0.35
TPM1-214ENST00000558544 B4GALNT1Q00973 533 aa17.23■□□□□ 0.35
TPM1-214ENST00000558544 PLA2G4EQ3MJ16 856 aa17.23■□□□□ 0.35
TPM1-214ENST00000558544 LDB1Q86U70 411 aaPredicted RBP17.23■□□□□ 0.35
TPM1-214ENST00000558544 CCDC25Q86WR0 208 aa17.23■□□□□ 0.35
TPM1-214ENST00000558544 TRAPPC5Q8IUR0 188 aa17.23■□□□□ 0.35
TPM1-214ENST00000558544 SLC25A45Q8N413 288 aa17.23■□□□□ 0.35
TPM1-214ENST00000558544 RASGEF1AQ8N9B8 481 aa17.23■□□□□ 0.35
TPM1-214ENST00000558544 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.23■□□□□ 0.35
TPM1-214ENST00000558544 CCL4L1Q8NHW4 92 aa17.23■□□□□ 0.35
TPM1-214ENST00000558544 IFT81Q8WYA0 676 aa17.23■□□□□ 0.35
TPM1-214ENST00000558544 DCUN1D1Q96GG9 259 aa17.23■□□□□ 0.35
TPM1-214ENST00000558544 SGSM3Q96HU1 749 aa17.23■□□□□ 0.35
TPM1-214ENST00000558544 NAT9Q9BTE0 207 aa17.23■□□□□ 0.35
TPM1-214ENST00000558544 BOCQ9BWV1 1114 aa17.23■□□□□ 0.35
TPM1-214ENST00000558544 RMI1Q9H9A7 625 aa17.23■□□□□ 0.35
TPM1-214ENST00000558544 ZC3H7BQ9UGR2 993 aaKnown RBP17.23■□□□□ 0.35
TPM1-214ENST00000558544 PLEKHM1Q9Y4G2 1056 aa17.23■□□□□ 0.35
TPM1-214ENST00000558544 PCDHGB2Q9Y5G2 931 aa17.23■□□□□ 0.35
TPM1-214ENST00000558544 CEP250Q9BV73 2442 aa17.22■□□□□ 0.35
TPM1-214ENST00000558544 OR2AG2A6NM03 316 aa17.22■□□□□ 0.35
TPM1-214ENST00000558544 GPR89AB7ZAQ6 455 aa17.22■□□□□ 0.35
TPM1-214ENST00000558544 CHUKO15111 745 aa17.22■□□□□ 0.35
TPM1-214ENST00000558544 FFAR2O15552 330 aa17.22■□□□□ 0.35
TPM1-214ENST00000558544 GRID2O43424 1007 aa17.22■□□□□ 0.35
TPM1-214ENST00000558544 TTC4O95801 387 aa17.22■□□□□ 0.35
TPM1-214ENST00000558544 GPR89BP0CG08 455 aa17.22■□□□□ 0.35
TPM1-214ENST00000558544 CD59P13987 128 aa17.22■□□□□ 0.35
TPM1-214ENST00000558544 CTSCP53634 463 aa17.22■□□□□ 0.35
TPM1-214ENST00000558544 SLC14A1Q13336 389 aa17.22■□□□□ 0.35
TPM1-214ENST00000558544 HLTFQ14527 1009 aaKnown RBP eCLIP17.22■□□□□ 0.35
TPM1-214ENST00000558544 SUZ12Q15022 739 aaKnown RBP17.22■□□□□ 0.35
TPM1-214ENST00000558544 ELOCQ15369 112 aa17.22■□□□□ 0.35
TPM1-214ENST00000558544 SPANXN3Q5MJ09 141 aa17.22■□□□□ 0.35
TPM1-214ENST00000558544 UNC5AQ6ZN44 842 aa17.22■□□□□ 0.35
TPM1-214ENST00000558544 CHST15Q7LFX5 561 aaPredicted RBP17.22■□□□□ 0.35
TPM1-214ENST00000558544 LRRTM4Q86VH4 590 aa17.22■□□□□ 0.35
TPM1-214ENST00000558544 UNC5BQ8IZJ1 945 aa17.22■□□□□ 0.35
TPM1-214ENST00000558544 FSTL5Q8N475 847 aaPredicted RBP17.22■□□□□ 0.35
TPM1-214ENST00000558544 PLAC1Q9HBJ0 212 aa17.22■□□□□ 0.35
TPM1-214ENST00000558544 C20orf96Q9NUD7 363 aaPredicted RBP17.22■□□□□ 0.35
TPM1-214ENST00000558544 TRNAU1APQ9NX07 287 aaKnown RBP17.22■□□□□ 0.35
TPM1-214ENST00000558544 BTBD3Q9Y2F9 522 aa17.22■□□□□ 0.35
TPM1-214ENST00000558544 FAM169AQ9Y6X4 670 aa17.22■□□□□ 0.35
TPM1-214ENST00000558544 COL5A1P20908 1838 aaPredicted RBP17.22■□□□□ 0.35
TPM1-214ENST00000558544 IGLV3-16A0A075B6K0 115 aa17.21■□□□□ 0.35
TPM1-214ENST00000558544 CFAP99D6REC4 459 aa17.21■□□□□ 0.35
TPM1-214ENST00000558544 EIF3HO15372 352 aaKnown RBP eCLIP17.21■□□□□ 0.35
TPM1-214ENST00000558544 RALBP11234 206 aa17.21■□□□□ 0.35
TPM1-214ENST00000558544 ACP5P13686 325 aa17.21■□□□□ 0.35
TPM1-214ENST00000558544 AK4P27144 223 aaPredicted RBP17.21■□□□□ 0.35
TPM1-214ENST00000558544 CARSP49589 748 aaKnown RBP17.21■□□□□ 0.35
TPM1-214ENST00000558544 CTBSQ01459 385 aa17.21■□□□□ 0.35
TPM1-214ENST00000558544 CBLBQ13191 982 aa17.21■□□□□ 0.35
TPM1-214ENST00000558544 ITIH4Q14624 930 aa17.21■□□□□ 0.35
TPM1-214ENST00000558544 LONRF1Q17RB8 773 aa17.21■□□□□ 0.35
TPM1-214ENST00000558544 DEFB133Q30KQ1 61 aa17.21■□□□□ 0.35
TPM1-214ENST00000558544 AARS2Q5JTZ9 985 aaKnown RBP17.21■□□□□ 0.35
TPM1-214ENST00000558544 TMEM220Q6QAJ8 160 aa17.21■□□□□ 0.35
TPM1-214ENST00000558544 CCNJLQ8IV13 435 aa17.21■□□□□ 0.35
TPM1-214ENST00000558544 ZNF547Q8IVP9 402 aa17.21■□□□□ 0.35
TPM1-214ENST00000558544 SETD7Q8WTS6 366 aaKnown RBP17.21■□□□□ 0.35
TPM1-214ENST00000558544 HEXDCQ8WVB3 486 aa17.21■□□□□ 0.35
TPM1-214ENST00000558544 SGF29Q96ES7 293 aa17.21■□□□□ 0.35
TPM1-214ENST00000558544 DOLKQ9UPQ8 538 aa17.21■□□□□ 0.35
TPM1-214ENST00000558544 ST14Q9Y5Y6 855 aa17.21■□□□□ 0.35
TPM1-214ENST00000558544 FLRT2O43155 660 aa17.2■□□□□ 0.34
TPM1-214ENST00000558544 SLU7O95391 586 aaKnown RBP17.2■□□□□ 0.34
TPM1-214ENST00000558544 ATP1B2P14415 290 aaPredicted RBP17.2■□□□□ 0.34
TPM1-214ENST00000558544 ECHS1P30084 290 aa17.2■□□□□ 0.34
TPM1-214ENST00000558544 ILF3Q12906 894 aaKnown RBP eCLIP17.2■□□□□ 0.34
TPM1-214ENST00000558544 THOC5Q13769 683 aaKnown RBP17.2■□□□□ 0.34
TPM1-214ENST00000558544 INSCQ1MX18 579 aa17.2■□□□□ 0.34
TPM1-214ENST00000558544 LYPLAL1Q5VWZ2 237 aa17.2■□□□□ 0.34
TPM1-214ENST00000558544 STEAP4Q687X5 459 aa17.2■□□□□ 0.34
TPM1-214ENST00000558544 MRNIPQ6NTE8 343 aa17.2■□□□□ 0.34
TPM1-214ENST00000558544 NEPROQ6NW34 567 aa17.2■□□□□ 0.34
TPM1-214ENST00000558544 CERS6Q6ZMG9 384 aa17.2■□□□□ 0.34
TPM1-214ENST00000558544 DBX2Q6ZNG2 339 aa17.2■□□□□ 0.34
TPM1-214ENST00000558544 CAPN12Q6ZSI9 719 aa17.2■□□□□ 0.34
TPM1-214ENST00000558544 TAF8Q7Z7C8 310 aa17.2■□□□□ 0.34
TPM1-214ENST00000558544 KCNMB4Q86W47 210 aa17.2■□□□□ 0.34
TPM1-214ENST00000558544 GKN2Q86XP6 184 aa17.2■□□□□ 0.34
TPM1-214ENST00000558544 NRROSQ86YC3 692 aa17.2■□□□□ 0.34
TPM1-214ENST00000558544 NAXDQ8IW45 347 aa17.2■□□□□ 0.34
TPM1-214ENST00000558544 IFT20Q8IY31 132 aa17.2■□□□□ 0.34
TPM1-214ENST00000558544 EID2Q8N6I1 236 aa17.2■□□□□ 0.34
TPM1-214ENST00000558544 BEND7Q8N7W2 519 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms