RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 TMEM115Q12893 351 aaPredicted RBP16.67■□□□□ 0.26
SNX1-203ENST00000558040 PDAP1Q13442 181 aaKnown RBP16.67■□□□□ 0.26
SNX1-203ENST00000558040 CMC1Q7Z7K0 106 aa16.67■□□□□ 0.26
SNX1-203ENST00000558040 PELI3Q8N2H9 469 aa16.67■□□□□ 0.26
SNX1-203ENST00000558040 ACVR1CQ8NER5 493 aa16.67■□□□□ 0.26
SNX1-203ENST00000558040 CADM4Q8NFZ8 388 aa16.67■□□□□ 0.26
SNX1-203ENST00000558040 COX14Q96I36 57 aa16.67■□□□□ 0.26
SNX1-203ENST00000558040 APOPT1Q96IL0 206 aa16.67■□□□□ 0.26
SNX1-203ENST00000558040 TSNARE1Q96NA8 513 aa16.67■□□□□ 0.26
SNX1-203ENST00000558040 KLF6Q99612 283 aaPredicted RBP16.67■□□□□ 0.26
SNX1-203ENST00000558040 OLFM1Q99784 485 aa16.67■□□□□ 0.26
SNX1-203ENST00000558040 TEX101Q9BY14 249 aa16.67■□□□□ 0.26
SNX1-203ENST00000558040 FAM126AQ9BYI3 521 aaPredicted RBP16.67■□□□□ 0.26
SNX1-203ENST00000558040 IQCGQ9H095 443 aaKnown RBP16.67■□□□□ 0.26
SNX1-203ENST00000558040 VPS11Q9H270 941 aa16.67■□□□□ 0.26
SNX1-203ENST00000558040 TRIM39Q9HCM9 518 aa16.67■□□□□ 0.26
SNX1-203ENST00000558040 MKS1Q9NXB0 559 aa16.67■□□□□ 0.26
SNX1-203ENST00000558040 PRAMEF26H0Y7S4 382 aa16.66■□□□□ 0.26
SNX1-203ENST00000558040 COPEO14579 308 aa16.66■□□□□ 0.26
SNX1-203ENST00000558040 TOR1BO14657 336 aa16.66■□□□□ 0.26
SNX1-203ENST00000558040 RAD51BO15315 384 aa16.66■□□□□ 0.26
SNX1-203ENST00000558040 PHGDHO43175 533 aaKnown RBP16.66■□□□□ 0.26
SNX1-203ENST00000558040 MTX2O75431 263 aa16.66■□□□□ 0.26
SNX1-203ENST00000558040 C2P06681 752 aa16.66■□□□□ 0.26
SNX1-203ENST00000558040 MYCLP1P12525 358 aaPredicted RBP16.66■□□□□ 0.26
SNX1-203ENST00000558040 CHRM3P20309 590 aa16.66■□□□□ 0.26
SNX1-203ENST00000558040 NR1D1P20393 614 aa16.66■□□□□ 0.26
SNX1-203ENST00000558040 CCT5P48643 541 aa16.66■□□□□ 0.26
SNX1-203ENST00000558040 PDE1CQ14123 709 aaPredicted RBP16.66■□□□□ 0.26
SNX1-203ENST00000558040 TBC1D1Q86TI0 1168 aaPredicted RBP16.66■□□□□ 0.26
SNX1-203ENST00000558040 LCA5Q86VQ0 697 aa16.66■□□□□ 0.26
SNX1-203ENST00000558040 CEP97Q8IW35 865 aa16.66■□□□□ 0.26
SNX1-203ENST00000558040 KRT222Q8N1A0 295 aa16.66■□□□□ 0.26
SNX1-203ENST00000558040 FAM160A2Q8N612 972 aaPredicted RBP16.66■□□□□ 0.26
SNX1-203ENST00000558040 CLDN19Q8N6F1 224 aa16.66■□□□□ 0.26
SNX1-203ENST00000558040 ARFGAP2Q8N6H7 521 aa16.66■□□□□ 0.26
SNX1-203ENST00000558040 ZNF514Q96K75 400 aaPredicted RBP16.66■□□□□ 0.26
SNX1-203ENST00000558040 SELENOSQ9BQE4 189 aa16.66■□□□□ 0.26
SNX1-203ENST00000558040 EPHX3Q9H6B9 360 aa16.66■□□□□ 0.26
SNX1-203ENST00000558040 SYTL2Q9HCH5 934 aa16.66■□□□□ 0.26
SNX1-203ENST00000558040 GPAMQ9HCL2 828 aa16.66■□□□□ 0.26
SNX1-203ENST00000558040 KCNK9Q9NPC2 374 aa16.66■□□□□ 0.26
SNX1-203ENST00000558040 FZD3Q9NPG1 666 aa16.66■□□□□ 0.26
SNX1-203ENST00000558040 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.66■□□□□ 0.26
SNX1-203ENST00000558040 TRMT6Q9UJA5 497 aaKnown RBP16.66■□□□□ 0.26
SNX1-203ENST00000558040 ACOT9Q9Y305 439 aa16.66■□□□□ 0.26
SNX1-203ENST00000558040 PRSS21Q9Y6M0 314 aa16.66■□□□□ 0.26
SNX1-203ENST00000558040 GPR89AB7ZAQ6 455 aa16.65■□□□□ 0.26
SNX1-203ENST00000558040 CACNB4O00305 520 aaPredicted RBP16.65■□□□□ 0.26
SNX1-203ENST00000558040 PRPF4O43172 522 aaKnown RBP eCLIP16.65■□□□□ 0.26
SNX1-203ENST00000558040 MAGEC1O60732 1142 aa16.65■□□□□ 0.26
SNX1-203ENST00000558040 GLRA3O75311 464 aa16.65■□□□□ 0.26
SNX1-203ENST00000558040 NIPSNAP2O75323 286 aa16.65■□□□□ 0.26
SNX1-203ENST00000558040 CDK14O94921 469 aa16.65■□□□□ 0.26
SNX1-203ENST00000558040 ASMTLO95671 621 aa16.65■□□□□ 0.26
SNX1-203ENST00000558040 FTH1P02794 183 aa16.65■□□□□ 0.26
SNX1-203ENST00000558040 IGHV4-34P06331 123 aa16.65■□□□□ 0.26
SNX1-203ENST00000558040 GSTA1P08263 222 aa16.65■□□□□ 0.26
SNX1-203ENST00000558040 GPR89BP0CG08 455 aa16.65■□□□□ 0.26
SNX1-203ENST00000558040 SLC35E2BP0CK96 405 aa16.65■□□□□ 0.26
SNX1-203ENST00000558040 COL6A2P12110 1019 aa16.65■□□□□ 0.26
SNX1-203ENST00000558040 SLC26A3P40879 764 aa16.65■□□□□ 0.26
SNX1-203ENST00000558040 CSRP3P50461 194 aa16.65■□□□□ 0.26
SNX1-203ENST00000558040 PPP2R2AP63151 447 aa16.65■□□□□ 0.26
SNX1-203ENST00000558040 KHDC1Q4VXA5 237 aaKnown RBP16.65■□□□□ 0.26
SNX1-203ENST00000558040 SH2D5Q6ZV89 423 aa16.65■□□□□ 0.26
SNX1-203ENST00000558040 DET1Q7L5Y6 550 aa16.65■□□□□ 0.26
SNX1-203ENST00000558040 ADGRG6Q86SQ4 1221 aa16.65■□□□□ 0.26
SNX1-203ENST00000558040 TRIM74Q86UV6 250 aa16.65■□□□□ 0.26
SNX1-203ENST00000558040 C1orf210Q8IVY1 113 aa16.65■□□□□ 0.26
SNX1-203ENST00000558040 BANPQ8N9N5 519 aa16.65■□□□□ 0.26
SNX1-203ENST00000558040 FAM76AQ8TAV0 307 aa16.65■□□□□ 0.26
SNX1-203ENST00000558040 BIRC7Q96CA5 298 aa16.65■□□□□ 0.26
SNX1-203ENST00000558040 CCDC97Q96F63 343 aaPredicted RBP16.65■□□□□ 0.26
SNX1-203ENST00000558040 GPR21Q99679 349 aa16.65■□□□□ 0.26
SNX1-203ENST00000558040 MYOCQ99972 504 aa16.65■□□□□ 0.26
SNX1-203ENST00000558040 OR2AG1Q9H205 316 aa16.65■□□□□ 0.26
SNX1-203ENST00000558040 DCDC2Q9UHG0 476 aa16.65■□□□□ 0.26
SNX1-203ENST00000558040 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.65■□□□□ 0.26
SNX1-203ENST00000558040 HS3ST3A1Q9Y663 406 aa16.65■□□□□ 0.26
SNX1-203ENST00000558040 OAS3Q9Y6K5 1087 aaKnown RBP16.65■□□□□ 0.26
SNX1-203ENST00000558040 NUMA1Q14980 2115 aa16.64■□□□□ 0.25
SNX1-203ENST00000558040 TECTAO75443 2155 aa16.64■□□□□ 0.25
SNX1-203ENST00000558040 KPNA5O15131 536 aa16.64■□□□□ 0.25
SNX1-203ENST00000558040 MAP3K13O43283 966 aa16.64■□□□□ 0.25
SNX1-203ENST00000558040 TRIM16O95361 564 aa16.64■□□□□ 0.25
SNX1-203ENST00000558040 HOXC4P09017 264 aaPredicted RBP16.64■□□□□ 0.25
SNX1-203ENST00000558040 KELP23276 732 aa16.64■□□□□ 0.25
SNX1-203ENST00000558040 CRHR1P34998 444 aa16.64■□□□□ 0.25
SNX1-203ENST00000558040 PRLHRP49683 370 aa16.64■□□□□ 0.25
SNX1-203ENST00000558040 KPNA2P52292 529 aaKnown RBP16.64■□□□□ 0.25
SNX1-203ENST00000558040 KIAA1024LP59773 190 aa16.64■□□□□ 0.25
SNX1-203ENST00000558040 RPL6Q02878 288 aaKnown RBP16.64■□□□□ 0.25
SNX1-203ENST00000558040 SEPT7Q16181 437 aaKnown RBP16.64■□□□□ 0.25
SNX1-203ENST00000558040 INSCQ1MX18 579 aa16.64■□□□□ 0.25
SNX1-203ENST00000558040 TTLL9Q3SXZ7 439 aa16.64■□□□□ 0.25
SNX1-203ENST00000558040 BCL7AQ4VC05 210 aa16.64■□□□□ 0.25
SNX1-203ENST00000558040 PPM1JQ5JR12 505 aa16.64■□□□□ 0.25
SNX1-203ENST00000558040 ZNF648Q5T619 568 aaPredicted RBP16.64■□□□□ 0.25
SNX1-203ENST00000558040 BMP8AQ7Z5Y6 402 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms