RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 GALNTL6Q49A17 601 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 ZRANB3Q5FWF4 1079 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 TECRLQ5HYJ1 363 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 LRRC73Q5JTD7 316 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 CTSL3PQ5NE16 218 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 RNF187Q5TA31 235 aaPredicted RBP7.32□□□□□ -1.24
SPG11-204ENST00000557866 ATG16L1Q676U5 607 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 LRRC66Q68CR7 880 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 PARM1Q6UWI2 310 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 FAM151BQ6UXP7 276 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 GDPD4Q6W3E5 623 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 TPRG1Q6ZUI0 275 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 TRPM8Q7Z2W7 1104 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 MAVSQ7Z434 540 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 YTHDF3Q7Z739 585 aaKnown RBP7.32□□□□□ -1.24
SPG11-204ENST00000557866 TDHQ8IZJ6 230 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 FITM2Q8N6M3 262 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 ZNF366Q8N895 744 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 TXNDC5Q8NBS9 432 aaKnown RBP7.32□□□□□ -1.24
SPG11-204ENST00000557866 GABPB2Q8TAK5 448 aaPredicted RBP7.32□□□□□ -1.24
SPG11-204ENST00000557866 TTC8Q8TAM2 541 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 GRIN3AQ8TCU5 1115 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 PPP2R3CQ969Q6 453 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 FAM136AQ96C01 138 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 SCRN2Q96FV2 425 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 TSPAN17Q96FV3 270 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 SCYL1Q96KG9 808 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 KLHL32Q96NJ5 620 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 TCF12Q99081 682 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 MRPL57Q9BQC6 102 aaKnown RBP7.32□□□□□ -1.24
SPG11-204ENST00000557866 HEPHQ9BQS7 1158 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 CIPCQ9C0C6 399 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 MRPL18Q9H0U6 180 aaKnown RBP7.32□□□□□ -1.24
SPG11-204ENST00000557866 P2RY12Q9H244 342 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 BRD9Q9H8M2 597 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 ZFP14Q9HCL3 533 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 PNPOQ9NVS9 261 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 OXSMQ9NWU1 459 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 B4GALT6Q9UBX8 382 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 DCTN4Q9UJW0 460 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 IKZF3Q9UKT9 509 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 CORO1CQ9ULV4 474 aaPredicted RBP7.32□□□□□ -1.24
SPG11-204ENST00000557866 PKP3Q9Y446 797 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 OAS3Q9Y6K5 1087 aaKnown RBP7.32□□□□□ -1.24
SPG11-204ENST00000557866 ATG2AQ2TAZ0 1938 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 TRBV5-4A0A0C4DH59 114 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 KRTAP9-6A0A140TA67 174 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 UBA6A0AVT1 1052 aaPredicted RBP7.31□□□□□ -1.24
SPG11-204ENST00000557866 NEMP2A6NFY4 417 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 H3BMM5 538 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 ARNTLO00327 626 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 ZNF195O14628 629 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 NIPSNAP2O75323 286 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 NDUFS3O75489 264 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 SMNDC1O75940 238 aaKnown RBP eCLIP7.31□□□□□ -1.24
SPG11-204ENST00000557866 RHOBTB1O94844 696 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 UBOX5O94941 541 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 ASLP04424 464 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 ATP5BP06576 529 aaKnown RBP7.31□□□□□ -1.24
SPG11-204ENST00000557866 TROVE2P10155 538 aaKnown RBP eCLIP7.31□□□□□ -1.24
SPG11-204ENST00000557866 MYL2P10916 166 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 HLA-EP13747 358 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 PKMP14618 531 aaKnown RBP7.31□□□□□ -1.24
SPG11-204ENST00000557866 CD1DP15813 335 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 UGT1A6P19224 532 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 UGT1A1P22309 533 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 UGT1A4P22310 534 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 GRK2P25098 689 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 NOS3P29474 1203 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 GJA4P35212 333 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 UGT1A3P35503 534 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 UGT1A5P35504 534 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 LTBRP36941 435 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 METAP1P53582 386 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 SLC12A2P55011 1212 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 ABCE1P61221 599 aaKnown RBP7.31□□□□□ -1.24
SPG11-204ENST00000557866 PFKPQ01813 784 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 KDSRQ06136 332 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 RAD51Q06609 339 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 ILF2Q12905 390 aaKnown RBP7.31□□□□□ -1.24
SPG11-204ENST00000557866 RALGDSQ12967 914 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 RUNX3Q13761 415 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 TSNAXIP1Q2TAA8 658 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 POM121L1PQ3SYA9 428 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 LACTB2Q53H82 288 aaPredicted RBP7.31□□□□□ -1.24
SPG11-204ENST00000557866 ATAT1Q5SQI0 421 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 C9orf64Q5T6V5 341 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 LIPMQ5VYY2 423 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 GRAMD4Q6IC98 578 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 PAQR3Q6TCH7 311 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 TAS2R42Q7RTR8 314 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 TBC1D1Q86TI0 1168 aaPredicted RBP7.31□□□□□ -1.24
SPG11-204ENST00000557866 ISCA2Q86U28 154 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 SERPINA9Q86WD7 417 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 LSMEM2Q8N112 164 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 CBARPQ8N350 705 aaPredicted RBP7.31□□□□□ -1.24
SPG11-204ENST00000557866 GPR26Q8NDV2 337 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 GIMAP7Q8NHV1 300 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 PPP1R14CQ8TAE6 165 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 RDH11Q8TC12 318 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms