RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 WDR7Q9Y4E6 1490 aa3.88□□□□□ -1.79
VRK1-207ENST00000557352 BCORL1Q5H9F3 1711 aa3.88□□□□□ -1.79
VRK1-207ENST00000557352 A0A1W2PP11 408 aa3.88□□□□□ -1.79
VRK1-207ENST00000557352 OR5K3A6NET4 321 aa3.88□□□□□ -1.79
VRK1-207ENST00000557352 M0QZ24 198 aa3.88□□□□□ -1.79
VRK1-207ENST00000557352 IFRD1O00458 451 aaPredicted RBP3.88□□□□□ -1.79
VRK1-207ENST00000557352 CD48P09326 243 aa3.88□□□□□ -1.79
VRK1-207ENST00000557352 ARL1P40616 181 aaPredicted RBP3.88□□□□□ -1.79
VRK1-207ENST00000557352 PAFAH1B1P43034 410 aa3.88□□□□□ -1.79
VRK1-207ENST00000557352 PIP4K2AP48426 406 aaPredicted RBP3.88□□□□□ -1.79
VRK1-207ENST00000557352 TBX2Q13207 712 aaPredicted RBP3.88□□□□□ -1.79
VRK1-207ENST00000557352 ZC2HC1CQ53FD0 456 aaPredicted RBP3.88□□□□□ -1.79
VRK1-207ENST00000557352 KRTCAP3Q53RY4 240 aa3.88□□□□□ -1.79
VRK1-207ENST00000557352 CXorf66Q5JRM2 361 aaPredicted RBP3.88□□□□□ -1.79
VRK1-207ENST00000557352 FAM69AQ5T7M9 428 aa3.88□□□□□ -1.79
VRK1-207ENST00000557352 RBMS3Q6XE24 437 aaKnown RBP3.88□□□□□ -1.79
VRK1-207ENST00000557352 ANO5Q75V66 913 aa3.88□□□□□ -1.79
VRK1-207ENST00000557352 RBM15BQ8NDT2 890 aaKnown RBP3.88□□□□□ -1.79
VRK1-207ENST00000557352 OR14L1PQ8NHC6 308 aa3.88□□□□□ -1.79
VRK1-207ENST00000557352 DNAAF4Q8WXU2 420 aa3.88□□□□□ -1.79
VRK1-207ENST00000557352 GTF3C6Q969F1 213 aa3.88□□□□□ -1.79
VRK1-207ENST00000557352 PHF21AQ96BD5 680 aa3.88□□□□□ -1.79
VRK1-207ENST00000557352 RNF125Q96EQ8 232 aa3.88□□□□□ -1.79
VRK1-207ENST00000557352 DGKBQ9Y6T7 804 aa3.88□□□□□ -1.79
VRK1-207ENST00000557352 GPATCH8Q9UKJ3 1502 aaKnown RBP3.88□□□□□ -1.79
VRK1-207ENST00000557352 CLSPNQ9HAW4 1339 aa3.88□□□□□ -1.79
VRK1-207ENST00000557352 GLI2P10070 1586 aa3.88□□□□□ -1.79
VRK1-207ENST00000557352 SAMD9LQ8IVG5 1584 aa3.88□□□□□ -1.79
VRK1-207ENST00000557352 KIF13AQ9H1H9 1805 aa3.88□□□□□ -1.79
VRK1-207ENST00000557352 MAP3K4Q9Y6R4 1608 aa3.88□□□□□ -1.79
VRK1-207ENST00000557352 HFM1A2PYH4 1435 aa3.87□□□□□ -1.79
VRK1-207ENST00000557352 CAMSAP2Q08AD1 1489 aa3.87□□□□□ -1.79
VRK1-207ENST00000557352 A0A1W2PPI3 338 aa3.87□□□□□ -1.79
VRK1-207ENST00000557352 HOXC11O43248 304 aaPredicted RBP3.87□□□□□ -1.79
VRK1-207ENST00000557352 PEX14O75381 377 aa3.87□□□□□ -1.79
VRK1-207ENST00000557352 PDE9AO76083 593 aa3.87□□□□□ -1.79
VRK1-207ENST00000557352 IGLV1-44P01699 117 aa3.87□□□□□ -1.79
VRK1-207ENST00000557352 IL7RP16871 459 aa3.87□□□□□ -1.79
VRK1-207ENST00000557352 ZNF182P17025 639 aaPredicted RBP3.87□□□□□ -1.79
VRK1-207ENST00000557352 UBA1P22314 1058 aaKnown RBP3.87□□□□□ -1.79
VRK1-207ENST00000557352 CTCFP49711 727 aaPredicted RBP3.87□□□□□ -1.79
VRK1-207ENST00000557352 MLLT10P55197 1068 aa3.87□□□□□ -1.79
VRK1-207ENST00000557352 OLIG2Q13516 323 aa3.87□□□□□ -1.79
VRK1-207ENST00000557352 ACVR2BQ13705 512 aa3.87□□□□□ -1.79
VRK1-207ENST00000557352 KIR2DS3Q14952 304 aa3.87□□□□□ -1.79
VRK1-207ENST00000557352 SLC9C2Q5TAH2 1124 aa3.87□□□□□ -1.79
VRK1-207ENST00000557352 PAPD4Q6PIY7 484 aaKnown RBP3.87□□□□□ -1.79
VRK1-207ENST00000557352 ATG9AQ7Z3C6 839 aa3.87□□□□□ -1.79
VRK1-207ENST00000557352 WDR20Q8TBZ3 569 aa3.87□□□□□ -1.79
VRK1-207ENST00000557352 HCAR2Q8TDS4 363 aa3.87□□□□□ -1.79
VRK1-207ENST00000557352 PSPC1Q8WXF1 523 aaKnown RBP3.87□□□□□ -1.79
VRK1-207ENST00000557352 SAAL1Q96ER3 474 aa3.87□□□□□ -1.79
VRK1-207ENST00000557352 RRNAD1Q96FB5 475 aaKnown RBP3.87□□□□□ -1.79
VRK1-207ENST00000557352 ABHD8Q96I13 439 aa3.87□□□□□ -1.79
VRK1-207ENST00000557352 HARBI1Q96MB7 349 aa3.87□□□□□ -1.79
VRK1-207ENST00000557352 SLC25A18Q9H1K4 315 aa3.87□□□□□ -1.79
VRK1-207ENST00000557352 BICC1Q9H694 974 aaKnown RBP3.87□□□□□ -1.79
VRK1-207ENST00000557352 ABI3Q9P2A4 366 aa3.87□□□□□ -1.79
VRK1-207ENST00000557352 ACAD8Q9UKU7 415 aa3.87□□□□□ -1.79
VRK1-207ENST00000557352 CAPN7Q9Y6W3 813 aa3.87□□□□□ -1.79
VRK1-207ENST00000557352 ROCK1Q13464 1354 aa3.87□□□□□ -1.79
VRK1-207ENST00000557352 KIAA1107Q9UPP5 1409 aa3.87□□□□□ -1.79
VRK1-207ENST00000557352 ABCC1P33527 1531 aa3.86□□□□□ -1.79
VRK1-207ENST00000557352 A0A0G2JLW4 131 aa3.86□□□□□ -1.79
VRK1-207ENST00000557352 SERINC4A6NH21 518 aa3.86□□□□□ -1.79
VRK1-207ENST00000557352 F9P00740 461 aa3.86□□□□□ -1.79
VRK1-207ENST00000557352 LUMP51884 338 aaPredicted RBP3.86□□□□□ -1.79
VRK1-207ENST00000557352 DCTN2Q13561 401 aaKnown RBP3.86□□□□□ -1.79
VRK1-207ENST00000557352 LCN10Q6JVE6 187 aa3.86□□□□□ -1.79
VRK1-207ENST00000557352 PLXDC2Q6UX71 529 aa3.86□□□□□ -1.79
VRK1-207ENST00000557352 NFKBIDQ8NI38 313 aa3.86□□□□□ -1.79
VRK1-207ENST00000557352 HTRA1Q92743 480 aa3.86□□□□□ -1.79
VRK1-207ENST00000557352 SENP5Q96HI0 755 aaPredicted RBP3.86□□□□□ -1.79
VRK1-207ENST00000557352 TMEM68Q96MH6 324 aa3.86□□□□□ -1.79
VRK1-207ENST00000557352 ADPRHL2Q9NX46 363 aa3.86□□□□□ -1.79
VRK1-207ENST00000557352 KLHL9Q9P2J3 617 aa3.86□□□□□ -1.79
VRK1-207ENST00000557352 OR14J1Q9UGF5 321 aa3.86□□□□□ -1.79
VRK1-207ENST00000557352 GJD2Q9UKL4 321 aa3.86□□□□□ -1.79
VRK1-207ENST00000557352 MKLN1Q9UL63 735 aa3.86□□□□□ -1.79
VRK1-207ENST00000557352 CAMK2AQ9UQM7 478 aa3.86□□□□□ -1.79
VRK1-207ENST00000557352 JRKLQ9Y4A0 524 aa3.86□□□□□ -1.79
VRK1-207ENST00000557352 CYP46A1Q9Y6A2 500 aa3.86□□□□□ -1.79
VRK1-207ENST00000557352 SMAD5-AS1Q9Y6J3 95 aa3.86□□□□□ -1.79
VRK1-207ENST00000557352 PRSS21Q9Y6M0 314 aa3.86□□□□□ -1.79
VRK1-207ENST00000557352 PRAG1Q86YV5 1406 aa3.86□□□□□ -1.79
VRK1-207ENST00000557352 INO80Q9ULG1 1556 aaPredicted RBP3.85□□□□□ -1.79
VRK1-207ENST00000557352 DEPDC5O75140 1603 aa3.85□□□□□ -1.79
VRK1-207ENST00000557352 EIF2AK4Q9P2K8 1649 aaKnown RBP3.85□□□□□ -1.79
VRK1-207ENST00000557352 RICTORQ6R327 1708 aa3.85□□□□□ -1.79
VRK1-207ENST00000557352 PLEKHD1A6NEE1 506 aa3.85□□□□□ -1.79
VRK1-207ENST00000557352 KRTAP16-1A8MUX0 517 aa3.85□□□□□ -1.79
VRK1-207ENST00000557352 TMEM178BH3BS89 294 aa3.85□□□□□ -1.79
VRK1-207ENST00000557352 TSHBP01222 138 aa3.85□□□□□ -1.79
VRK1-207ENST00000557352 ZNF26P17031 533 aaPredicted RBP3.85□□□□□ -1.79
VRK1-207ENST00000557352 ABCD3P28288 659 aa3.85□□□□□ -1.79
VRK1-207ENST00000557352 ELF1P32519 619 aa3.85□□□□□ -1.79
VRK1-207ENST00000557352 NR2C2P49116 596 aa3.85□□□□□ -1.79
VRK1-207ENST00000557352 EIF3BP55884 814 aaKnown RBP3.85□□□□□ -1.79
VRK1-207ENST00000557352 IRX1P78414 480 aaPredicted RBP3.85□□□□□ -1.79
VRK1-207ENST00000557352 MBTD1Q05BQ5 628 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms