RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-231	ENST00000557336	KLC4	Q9NSK0	619 aa		11.01	□□□□□ -0.65
HNRNPC-231	ENST00000557336	PKD2L2	Q9NZM6	624 aa		11.01	□□□□□ -0.65
HNRNPC-231	ENST00000557336	IFNK	Q9P0W0	207 aa		11.01	□□□□□ -0.65
HNRNPC-231	ENST00000557336	MAP10	Q9P2G4	905 aa		11.01	□□□□□ -0.65
HNRNPC-231	ENST00000557336	UVRAG	Q9P2Y5	699 aa		11.01	□□□□□ -0.65
HNRNPC-231	ENST00000557336	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	11.01	□□□□□ -0.65
HNRNPC-231	ENST00000557336	KLHL3	Q9UH77	587 aa		11.01	□□□□□ -0.65
HNRNPC-231	ENST00000557336	SHOC2	Q9UQ13	582 aa		11.01	□□□□□ -0.65
HNRNPC-231	ENST00000557336	MN1	Q10571	1320 aa	Predicted RBP	11.01	□□□□□ -0.65
HNRNPC-231	ENST00000557336	NBPF19	A0A087WUL8	3843 aa		11	□□□□□ -0.65
HNRNPC-231	ENST00000557336	SYCE3	A1L190	88 aa		11	□□□□□ -0.65
HNRNPC-231	ENST00000557336	ZNF487	B1APH4	448 aa		11	□□□□□ -0.65
HNRNPC-231	ENST00000557336	KIF1C	O43896	1103 aa	Known RBP	11	□□□□□ -0.65
HNRNPC-231	ENST00000557336	KRT7	P08729	469 aa		11	□□□□□ -0.65
HNRNPC-231	ENST00000557336	ANKRD34C	P0C6C1	535 aa		11	□□□□□ -0.65
HNRNPC-231	ENST00000557336	CCNYL3	P0C7X3	344 aa		11	□□□□□ -0.65
HNRNPC-231	ENST00000557336	BPI	P17213	487 aa		11	□□□□□ -0.65
HNRNPC-231	ENST00000557336	XRCC1	P18887	633 aa	Predicted RBP	11	□□□□□ -0.65
HNRNPC-231	ENST00000557336	MAP4	P27816	1152 aa	Known RBP	11	□□□□□ -0.65
HNRNPC-231	ENST00000557336	MAN1A1	P33908	653 aa		11	□□□□□ -0.65
HNRNPC-231	ENST00000557336	MAPK9	P45984	424 aa		11	□□□□□ -0.65
HNRNPC-231	ENST00000557336	NOP2	P46087	812 aa	Known RBP	11	□□□□□ -0.65
HNRNPC-231	ENST00000557336	DCDC1	P59894	354 aa		11	□□□□□ -0.65
HNRNPC-231	ENST00000557336	SRSF1	Q07955	248 aa	Known RBP eCLIP	11	□□□□□ -0.65	1e-8	■■■□□ 14.8
HNRNPC-231	ENST00000557336	SLC18A3	Q16572	532 aa		11	□□□□□ -0.65
HNRNPC-231	ENST00000557336	SKIDA1	Q1XH10	827 aa		11	□□□□□ -0.65
HNRNPC-231	ENST00000557336	ALS2CL	Q60I27	953 aa		11	□□□□□ -0.65
HNRNPC-231	ENST00000557336	SLC9B2	Q86UD5	537 aa		11	□□□□□ -0.65
HNRNPC-231	ENST00000557336	MAP7D3	Q8IWC1	876 aa		11	□□□□□ -0.65
HNRNPC-231	ENST00000557336	GLYATL1	Q969I3	302 aa		11	□□□□□ -0.65
HNRNPC-231	ENST00000557336	SH3KBP1	Q96B97	665 aa		11	□□□□□ -0.65
HNRNPC-231	ENST00000557336	C9orf72	Q96LT7	481 aa		11	□□□□□ -0.65
HNRNPC-231	ENST00000557336	TEFM	Q96QE5	360 aa	Known RBP	11	□□□□□ -0.65
HNRNPC-231	ENST00000557336	EPN3	Q9H201	632 aa		11	□□□□□ -0.65
HNRNPC-231	ENST00000557336	UCK1	Q9HA47	277 aa		11	□□□□□ -0.65
HNRNPC-231	ENST00000557336	ZFYVE1	Q9HBF4	777 aa		11	□□□□□ -0.65
HNRNPC-231	ENST00000557336	MAGEE1	Q9HCI5	957 aa		11	□□□□□ -0.65
HNRNPC-231	ENST00000557336	TUBD1	Q9UJT1	453 aa		11	□□□□□ -0.65
HNRNPC-231	ENST00000557336	HEY1	Q9Y5J3	304 aa		11	□□□□□ -0.65
HNRNPC-231	ENST00000557336	MRPS18B	Q9Y676	258 aa	Known RBP	11	□□□□□ -0.65
HNRNPC-231	ENST00000557336	OR5K4	A6NMS3	321 aa		10.99	□□□□□ -0.65
HNRNPC-231	ENST00000557336	ZNF891	A8MT65	544 aa	Predicted RBP	10.99	□□□□□ -0.65
HNRNPC-231	ENST00000557336		K7EM74	188 aa		10.99	□□□□□ -0.65
HNRNPC-231	ENST00000557336	MTX2	O75431	263 aa		10.99	□□□□□ -0.65
HNRNPC-231	ENST00000557336	SLC25A14	O95258	325 aa	Predicted RBP	10.99	□□□□□ -0.65
HNRNPC-231	ENST00000557336	MT-CYB	P00156	380 aa	Predicted RBP	10.99	□□□□□ -0.65
HNRNPC-231	ENST00000557336	FURIN	P09958	794 aa		10.99	□□□□□ -0.65
HNRNPC-231	ENST00000557336	H2AFZ	P0C0S5	128 aa		10.99	□□□□□ -0.65
HNRNPC-231	ENST00000557336	PRKAR1A	P10644	381 aa		10.99	□□□□□ -0.65
HNRNPC-231	ENST00000557336	TYRP1	P17643	537 aa		10.99	□□□□□ -0.65
HNRNPC-231	ENST00000557336	CA4	P22748	312 aa		10.99	□□□□□ -0.65
HNRNPC-231	ENST00000557336	STAT5A	P42229	794 aa		10.99	□□□□□ -0.65
HNRNPC-231	ENST00000557336	LEPR	P48357	1165 aa	Known RBP	10.99	□□□□□ -0.65
HNRNPC-231	ENST00000557336	SH3BP2	P78314	561 aa		10.99	□□□□□ -0.65
HNRNPC-231	ENST00000557336	ABHD18	Q0P651	414 aa		10.99	□□□□□ -0.65
HNRNPC-231	ENST00000557336	CDC20	Q12834	499 aa		10.99	□□□□□ -0.65
HNRNPC-231	ENST00000557336	MESD	Q14696	234 aa		10.99	□□□□□ -0.65
HNRNPC-231	ENST00000557336	NOMO1	Q15155	1222 aa		10.99	□□□□□ -0.65
HNRNPC-231	ENST00000557336	COLEC12	Q5KU26	742 aa		10.99	□□□□□ -0.65
HNRNPC-231	ENST00000557336	CRTC3	Q6UUV7	619 aa		10.99	□□□□□ -0.65
HNRNPC-231	ENST00000557336	ABRAXAS1	Q6UWZ7	409 aa		10.99	□□□□□ -0.65
HNRNPC-231	ENST00000557336	CEACAM20	Q6UY09	585 aa		10.99	□□□□□ -0.65
HNRNPC-231	ENST00000557336	TMEM26	Q6ZUK4	368 aa		10.99	□□□□□ -0.65
HNRNPC-231	ENST00000557336	H2AFV	Q71UI9	128 aa		10.99	□□□□□ -0.65
HNRNPC-231	ENST00000557336	TRAM1L1	Q8N609	369 aa		10.99	□□□□□ -0.65
HNRNPC-231	ENST00000557336	SLC35G2	Q8TBE7	412 aa		10.99	□□□□□ -0.65
HNRNPC-231	ENST00000557336	CCHCR1	Q8TD31	782 aa		10.99	□□□□□ -0.65
HNRNPC-231	ENST00000557336	AGAP3	Q96P47	875 aa		10.99	□□□□□ -0.65
HNRNPC-231	ENST00000557336	DNAJC7	Q99615	494 aa		10.99	□□□□□ -0.65
HNRNPC-231	ENST00000557336	CHP1	Q99653	195 aa		10.99	□□□□□ -0.65
HNRNPC-231	ENST00000557336	ZPBP	Q9BS86	351 aa		10.99	□□□□□ -0.65
HNRNPC-231	ENST00000557336	SPATA16	Q9BXB7	569 aa		10.99	□□□□□ -0.65
HNRNPC-231	ENST00000557336	ADGRE3	Q9BY15	652 aa		10.99	□□□□□ -0.65
HNRNPC-231	ENST00000557336	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	10.99	□□□□□ -0.65
HNRNPC-231	ENST00000557336	SLC25A51	Q9H1U9	297 aa		10.99	□□□□□ -0.65
HNRNPC-231	ENST00000557336	GPN2	Q9H9Y4	310 aa	Predicted RBP	10.99	□□□□□ -0.65
HNRNPC-231	ENST00000557336	SLC40A1	Q9NP59	571 aa		10.99	□□□□□ -0.65
HNRNPC-231	ENST00000557336	ZNF711	Q9Y462	761 aa		10.99	□□□□□ -0.65
HNRNPC-231	ENST00000557336	LRRD1	A4D1F6	860 aa		10.98	□□□□□ -0.65
HNRNPC-231	ENST00000557336	CLEC18A	A5D8T8	446 aa		10.98	□□□□□ -0.65
HNRNPC-231	ENST00000557336	OR52A4P	A6NMU1	304 aa		10.98	□□□□□ -0.65
HNRNPC-231	ENST00000557336	POLR1C	O15160	346 aa	Predicted RBP	10.98	□□□□□ -0.65
HNRNPC-231	ENST00000557336	CAPN5	O15484	640 aa	Predicted RBP	10.98	□□□□□ -0.65
HNRNPC-231	ENST00000557336	MTA2	O94776	668 aa		10.98	□□□□□ -0.65
HNRNPC-231	ENST00000557336	F12	P00748	615 aa	Predicted RBP	10.98	□□□□□ -0.65
HNRNPC-231	ENST00000557336	TMEM253	P0C7T8	217 aa		10.98	□□□□□ -0.65
HNRNPC-231	ENST00000557336	ZNF7	P17097	686 aa	Predicted RBP	10.98	□□□□□ -0.65
HNRNPC-231	ENST00000557336	CD68	P34810	354 aa	Predicted RBP	10.98	□□□□□ -0.65
HNRNPC-231	ENST00000557336	CCR10	P46092	362 aa		10.98	□□□□□ -0.65
HNRNPC-231	ENST00000557336	CDK18	Q07002	472 aa		10.98	□□□□□ -0.65
HNRNPC-231	ENST00000557336	ADCY2	Q08462	1091 aa		10.98	□□□□□ -0.65
HNRNPC-231	ENST00000557336	AP1B1	Q10567	949 aa		10.98	□□□□□ -0.65
HNRNPC-231	ENST00000557336	WASHC5	Q12768	1159 aa		10.98	□□□□□ -0.65
HNRNPC-231	ENST00000557336	IGFBP7	Q16270	282 aa		10.98	□□□□□ -0.65
HNRNPC-231	ENST00000557336	PCSK7	Q16549	785 aa		10.98	□□□□□ -0.65
HNRNPC-231	ENST00000557336	TAZ	Q16635	292 aa		10.98	□□□□□ -0.65
HNRNPC-231	ENST00000557336	PLA2G4E	Q3MJ16	856 aa		10.98	□□□□□ -0.65
HNRNPC-231	ENST00000557336	ATP13A5	Q4VNC0	1218 aa		10.98	□□□□□ -0.65
HNRNPC-231	ENST00000557336	ZNF569	Q5MCW4	686 aa		10.98	□□□□□ -0.65
HNRNPC-231	ENST00000557336	CLEC18B	Q6UXF7	455 aa		10.98	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms