RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 MAMDC2Q7Z304 686 aaPredicted RBP8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 PRR7Q8TB68 274 aa8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 ARRDC2Q8TBH0 407 aa8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 SEC14L1Q92503 715 aa8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 ZNF653Q96CK0 615 aa8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 ZDHHC12Q96GR4 267 aa8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 ERGIC2Q96RQ1 377 aa8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 LYSMD1Q96S90 227 aa8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 GPR87Q9BY21 358 aa8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 ING2Q9H160 280 aa8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 PCDH9Q9HC56 1237 aa8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 PCDH18Q9HCL0 1135 aa8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 PDE7BQ9NP56 450 aa8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 SLC40A1Q9NP59 571 aa8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 ACSS2Q9NR19 701 aa8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 RBM22Q9NW64 420 aaKnown RBP eCLIP8.88□□□□□ -0.999e-23■■■■□ 21.1
HNRNPC-227ENST00000556897 DTLQ9NZJ0 730 aa8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 PKD2L2Q9NZM6 624 aa8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 MAP10Q9P2G4 905 aa8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 RARRES3Q9UL19 164 aa8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 DNAJC16Q9Y2G8 782 aa8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 PCDHGA9Q9Y5G4 932 aaKnown RBP8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 CRYBG3Q68DQ2 2970 aa8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 CHUKO15111 745 aa8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 MFSD11O43934 449 aa8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 MTX2O75431 263 aa8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 SLC25A14O95258 325 aaPredicted RBP8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 CLDN1O95832 211 aa8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 DDAH2O95865 285 aa8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 BRAFP15056 766 aa8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 FOLR1P15328 257 aa8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 CA4P22748 312 aa8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 CES1P23141 567 aa8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 IL4RP24394 825 aa8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 ZNF165P49910 485 aa8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 DRG2P55039 364 aaKnown RBP8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 RPL26P61254 145 aaKnown RBP8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 RPS15P62841 145 aaKnown RBP8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 NIPAL4Q0D2K0 466 aa8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 GALNT2Q10471 571 aa8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 MMRN1Q13201 1228 aa8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 QPCTQ16769 361 aa8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 ZNF569Q5MCW4 686 aa8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 JMJD6Q6NYC1 403 aaPredicted RBP8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 ADGRG6Q86SQ4 1221 aa8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 SYVN1Q86TM6 617 aa8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 LRRC49Q8IUZ0 686 aa8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 ZNF547Q8IVP9 402 aa8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 Q8NA96 180 aa8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 ANKRD20A12PQ8NF67 263 aa8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 CCHCR1Q8TD31 782 aa8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 LRRN4Q8WUT4 740 aa8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 EID2BQ96D98 161 aa8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 SLC41A2Q96JW4 573 aa8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 SPATA16Q9BXB7 569 aa8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 TRIM39Q9HCM9 518 aa8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 SLAMF7Q9NQ25 335 aa8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 POT1Q9NUX5 634 aa8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 MYO1AQ9UBC5 1043 aa8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 TRIM10Q9UDY6 481 aa8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 LIMA1Q9UHB6 759 aaKnown RBP8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 ERRFI1Q9UJM3 462 aaPredicted RBP8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 RPL26L1Q9UNX3 145 aaKnown RBP8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 SCINQ9Y6U3 715 aa8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 CELSR2Q9HCU4 2923 aa8.87□□□□□ -0.99
HNRNPC-227ENST00000556897 IGHV5-51A0A0C4DH38 117 aa8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 RGSL1A5PLK6 1076 aa8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 LRRC10BA6NIK2 292 aa8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 ANKRD66B4E2M5 251 aa8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 GPR89AB7ZAQ6 455 aa8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 MATN3O15232 486 aa8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 SLC4A1P02730 911 aa8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 HLA-DQB2P05538 268 aa8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 CD48P09326 243 aa8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 EBLN1P0CF75 366 aa8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 GPR89BP0CG08 455 aa8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 GZMAP12544 262 aa8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 ZNF7P17097 686 aaPredicted RBP8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 PTGIRP43119 386 aa8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 LAMB3Q13751 1172 aa8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 KRT81Q14533 505 aa8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 CHRNA6Q15825 494 aa8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 CCDC122Q5T0U0 273 aa8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 TIGD7Q6NT04 549 aaPredicted RBP8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 CYB5D1Q6P9G0 228 aa8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 ABRAXAS1Q6UWZ7 409 aa8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 CERS6Q6ZMG9 384 aa8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 APTXQ7Z2E3 356 aaKnown RBP8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 ZNF571Q7Z3V5 609 aaPredicted RBP8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 LRRTM4Q86VH4 590 aa8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 SIDT2Q8NBJ9 832 aaKnown RBP8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 GPR26Q8NDV2 337 aa8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 TEKT4Q8WW24 435 aa8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 UBXN4Q92575 508 aa8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 MAML1Q92585 1016 aa8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 GLYATL1Q969I3 302 aa8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 CXorf40BQ96DE9 158 aa8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 TCTN2Q96GX1 697 aa8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 MLPHQ9BV36 600 aaPredicted RBP8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 RAB33BQ9H082 229 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms