RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 SLC35B2Q8TB61 432 aa10.19□□□□□ -0.78
SHMT2-224ENST00000556737 CCDC74BQ96LY2 380 aa10.19□□□□□ -0.78
SHMT2-224ENST00000556737 APOL2Q9BQE5 337 aa10.19□□□□□ -0.78
SHMT2-224ENST00000556737 TIMM29Q9BSF4 260 aa10.19□□□□□ -0.78
SHMT2-224ENST00000556737 STRADBQ9C0K7 418 aa10.19□□□□□ -0.78
SHMT2-224ENST00000556737 TMEM9Q9P0T7 183 aa10.19□□□□□ -0.78
SHMT2-224ENST00000556737 SCHIP1Q9P0W5 487 aaPredicted RBP10.19□□□□□ -0.78
SHMT2-224ENST00000556737 JRKLQ9Y4A0 524 aa10.19□□□□□ -0.78
SHMT2-224ENST00000556737 LOXL2Q9Y4K0 774 aa10.19□□□□□ -0.78
SHMT2-224ENST00000556737 ARL5AQ9Y689 179 aa10.19□□□□□ -0.78
SHMT2-224ENST00000556737 UNC13CQ8NB66 2214 aa10.19□□□□□ -0.78
SHMT2-224ENST00000556737 TRBV23OR9-2A0A075B6M9 112 aa10.18□□□□□ -0.78
SHMT2-224ENST00000556737 GLYATL1P3A0A0U1RQE8 302 aa10.18□□□□□ -0.78
SHMT2-224ENST00000556737 C5orf60A6NFR6 353 aa10.18□□□□□ -0.78
SHMT2-224ENST00000556737 TMX2-CTNND1H3BSU7 103 aa10.18□□□□□ -0.78
SHMT2-224ENST00000556737 VEGFDO43915 354 aa10.18□□□□□ -0.78
SHMT2-224ENST00000556737 METTL18O95568 372 aa10.18□□□□□ -0.78
SHMT2-224ENST00000556737 THRAP10827 490 aa10.18□□□□□ -0.78
SHMT2-224ENST00000556737 F3P13726 295 aa10.18□□□□□ -0.78
SHMT2-224ENST00000556737 HOXB3P14651 431 aaPredicted RBP10.18□□□□□ -0.78
SHMT2-224ENST00000556737 BRAFP15056 766 aa10.18□□□□□ -0.78
SHMT2-224ENST00000556737 RBMS1P29558 406 aaKnown RBP10.18□□□□□ -0.78
SHMT2-224ENST00000556737 ALDH4A1P30038 563 aa10.18□□□□□ -0.78
SHMT2-224ENST00000556737 CETN2P41208 172 aa10.18□□□□□ -0.78
SHMT2-224ENST00000556737 ZNF140P52738 457 aaPredicted RBP10.18□□□□□ -0.78
SHMT2-224ENST00000556737 HHEXQ03014 270 aa10.18□□□□□ -0.78
SHMT2-224ENST00000556737 SQSTM1Q13501 440 aa10.18□□□□□ -0.78
SHMT2-224ENST00000556737 RPS6KA1Q15418 735 aa10.18□□□□□ -0.78
SHMT2-224ENST00000556737 CHRNA6Q15825 494 aa10.18□□□□□ -0.78
SHMT2-224ENST00000556737 PHF19Q5T6S3 580 aa10.18□□□□□ -0.78
SHMT2-224ENST00000556737 KCTD11Q693B1 232 aa10.18□□□□□ -0.78
SHMT2-224ENST00000556737 IYDQ6PHW0 289 aa10.18□□□□□ -0.78
SHMT2-224ENST00000556737 FOXR1Q6PIV2 292 aa10.18□□□□□ -0.78
SHMT2-224ENST00000556737 XKR5Q6UX68 686 aa10.18□□□□□ -0.78
SHMT2-224ENST00000556737 FAM151BQ6UXP7 276 aa10.18□□□□□ -0.78
SHMT2-224ENST00000556737 LRRC69Q6ZNQ3 347 aa10.18□□□□□ -0.78
SHMT2-224ENST00000556737 MICALCLQ6ZW33 695 aa10.18□□□□□ -0.78
SHMT2-224ENST00000556737 FBXO39Q8N4B4 442 aa10.18□□□□□ -0.78
SHMT2-224ENST00000556737 DDHD1Q8NEL9 900 aa10.18□□□□□ -0.78
SHMT2-224ENST00000556737 ATG4AQ8WYN0 398 aa10.18□□□□□ -0.78
SHMT2-224ENST00000556737 RTP4Q96DX8 246 aa10.18□□□□□ -0.78
SHMT2-224ENST00000556737 NAF1Q96HR8 494 aaKnown RBP10.18□□□□□ -0.78
SHMT2-224ENST00000556737 BBC3Q96PG8 261 aaPredicted RBP10.18□□□□□ -0.78
SHMT2-224ENST00000556737 SARS2Q9NP81 518 aaKnown RBP10.18□□□□□ -0.78
SHMT2-224ENST00000556737 PRDM8Q9NQV8 689 aa10.18□□□□□ -0.78
SHMT2-224ENST00000556737 KLC4Q9NSK0 619 aa10.18□□□□□ -0.78
SHMT2-224ENST00000556737 KCNK4Q9NYG8 393 aa10.18□□□□□ -0.78
SHMT2-224ENST00000556737 ACSL6Q9UKU0 697 aa10.18□□□□□ -0.78
SHMT2-224ENST00000556737 KCTD3Q9Y597 815 aa10.18□□□□□ -0.78
SHMT2-224ENST00000556737 PCDHGA7Q9Y5G6 932 aa10.18□□□□□ -0.78
SHMT2-224ENST00000556737 KIR2DS5A0A0G2JLQ3 304 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 A0A0G2JNG1 304 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 KIR2DS3K7RE56 304 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 KMOO15229 486 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 UGT1A9O60656 530 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 SNX2O60749 519 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 PPFIA2O75334 1257 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 ZNF189O75820 626 aaPredicted RBP10.17□□□□□ -0.78
SHMT2-224ENST00000556737 STK10O94804 968 aaKnown RBP10.17□□□□□ -0.78
SHMT2-224ENST00000556737 PRAMEF1O95521 474 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 ZNF7P17097 686 aaPredicted RBP10.17□□□□□ -0.78
SHMT2-224ENST00000556737 UGT1A6P19224 532 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 UGT1A1P22309 533 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 UGT1A4P22310 534 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 UGT1A3P35503 534 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 TNNT3P45378 269 aaPredicted RBP10.17□□□□□ -0.78
SHMT2-224ENST00000556737 CTSCP53634 463 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 LIMK2P53671 638 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 GPLD1P80108 840 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 XIAPP98170 497 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 TMEM115Q12893 351 aaPredicted RBP10.17□□□□□ -0.78
SHMT2-224ENST00000556737 CLN3Q13286 438 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 NFATC2Q13469 925 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 KIR2DS5Q14953 304 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 TAF1AQ15573 450 aaPredicted RBP10.17□□□□□ -0.78
SHMT2-224ENST00000556737 INSCQ1MX18 579 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 GPRC6AQ5T6X5 926 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 ZDHHC20Q5W0Z9 365 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 USP53Q70EK8 1073 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 PIM3Q86V86 326 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 RASGEF1AQ8N9B8 481 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 FAM71DQ8N9W8 422 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 TTC13Q8NBP0 860 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 RCBTB1Q8NDN9 531 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 OR4D9Q8NGE8 314 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 KCNE4Q8WWG9 221 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 TMEM159Q96B96 161 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 CCDC97Q96F63 343 aaPredicted RBP10.17□□□□□ -0.78
SHMT2-224ENST00000556737 FCRL3Q96P31 734 aaPredicted RBP10.17□□□□□ -0.78
SHMT2-224ENST00000556737 TBL1YQ9BQ87 522 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 FERMT1Q9BQL6 677 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 TMEM121Q9BTD3 319 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 OSGEPL1Q9H4B0 414 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 UGT1A7Q9HAW7 530 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 UGT1A10Q9HAW8 530 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 UGT1A8Q9HAW9 530 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 ARNT2Q9HBZ2 717 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 FOXJ2Q9P0K8 574 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 PISDQ9UG56 409 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 FKBPLQ9UIM3 349 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms