RNA–Protein interactions for RNA: ENST00000556639.5

EFCAB11-212, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 2,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-212ENST00000556639 AGBL4Q5VU57 503 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 LIPMQ5VYY2 423 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 KLC3Q6P597 504 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 PIWIL4Q7Z3Z4 852 aaKnown RBP13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 TRIM74Q86UV6 250 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 RALGPS2Q86X27 583 aaPredicted RBP13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 HDDC3Q8N4P3 179 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 CCNYL1Q8N7R7 359 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 C10orf82Q8WW14 230 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 HLA-CQ95604 372 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 DTD2Q96FN9 168 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 C7orf26Q96N11 449 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 SYTL2Q9HCH5 934 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 PRDM6Q9NQX0 595 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 THAP1Q9NVV9 213 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 GNPTGQ9UJJ9 305 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 DNAJC16Q9Y2G8 782 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 PCDHB1Q9Y5F3 818 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 IGLV3-16A0A075B6K0 115 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 A0A0G2JND7 137 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 SOD1P00441 154 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 MTHFD2P13995 350 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 AKT1P31749 480 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 PPARGP37231 505 aaPredicted RBP13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 SLC26A3P40879 764 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 NSG1P42857 185 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 DCDC1P59894 354 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 SMAD2Q15796 467 aaKnown RBP13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 ACSBG2Q5FVE4 666 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 LYPLAL1Q5VWZ2 237 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 ZDHHC20Q5W0Z9 365 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 MACC1Q6ZN28 852 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 TRAM1L1Q8N609 369 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 RAB3IL1Q8TBN0 382 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 RDH11Q8TC12 318 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 TMEM237Q96Q45 408 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 ATOH8Q96SQ7 321 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 TTC1Q99614 292 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 HDAC8Q9BY41 377 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 DERL2Q9GZP9 239 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 CD93Q9NPY3 652 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 TRPV5Q9NQA5 729 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 ABCF3Q9NUQ8 709 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 BTN3A1O00481 513 aa13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 SGTAO43765 313 aa13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 LZTS3O60299 673 aaPredicted RBP13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 RBP1P09455 135 aa13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 HOXB2P14652 356 aa13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 TSPAN8P19075 237 aa13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 NFKBIAP25963 317 aa13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 ELP6Q0PNE2 266 aa13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 SPRED3Q2MJR0 410 aa13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 TMEM52BQ4KMG9 183 aa13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 LSMEM2Q8N112 164 aa13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 ZNF781Q8N8C0 355 aa13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 GRAMD1AQ96CP6 724 aa13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 GABRG3Q99928 467 aa13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 KLHL14Q9P2G3 628 aa13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 CNOT6Q9ULM6 557 aaKnown RBP13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 PRR23AA6NEV1 266 aa13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 IGLON5A6NGN9 336 aa13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 NCF1BA6NI72 391 aaPredicted RBP13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 OR2AG2A6NM03 316 aa13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 NCF1CA8MVU1 366 aaPredicted RBP13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 RNASEH2AO75792 299 aaKnown RBP13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 SIX3O95343 332 aaPredicted RBP13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 NCF1P14598 390 aaPredicted RBP13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 CD9P21926 228 aa13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 ATP5F1P24539 256 aaPredicted RBP13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 CCR7P32248 378 aa13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 IL2P60568 153 aa13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 GRSF1Q12849 480 aaKnown RBP eCLIP13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 ITIH4Q14624 930 aa13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 ZNF284Q2VY69 593 aa13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 FAM46CQ5VWP2 391 aa13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 SEL1L3Q68CR1 1132 aa13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 PTCRAQ6ISU1 281 aaPredicted RBP13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 TRIM67Q6ZTA4 783 aa13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 TMPRSS6Q8IU80 811 aa13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 CRLF3Q8IUI8 442 aa13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 SUGP1Q8IWZ8 645 aaKnown RBP13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 PLCD3Q8N3E9 789 aa13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 PLA2G15Q8NCC3 412 aa13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 BTN2A2Q8WVV5 523 aa13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 KLK6Q92876 244 aa13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 TRIM55Q9BYV6 548 aa13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 CD248Q9HCU0 757 aa13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 NCKIPSDQ9NZQ3 722 aa13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 FAM8A1Q9UBU6 413 aa13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 ARL2BPQ9Y2Y0 163 aa13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 COMMD10Q9Y6G5 202 aa13.64□□□□□ -0.23
EFCAB11-212ENST00000556639 H0Y858 1186 aa13.63□□□□□ -0.23
EFCAB11-212ENST00000556639 ATP1B2P14415 290 aaPredicted RBP13.63□□□□□ -0.23
EFCAB11-212ENST00000556639 GRK2P25098 689 aa13.63□□□□□ -0.23
EFCAB11-212ENST00000556639 MPSTP25325 297 aa13.63□□□□□ -0.23
EFCAB11-212ENST00000556639 SKIV2L2P42285 1042 aaKnown RBP13.63□□□□□ -0.23
EFCAB11-212ENST00000556639 KPNA2P52292 529 aaKnown RBP13.63□□□□□ -0.23
EFCAB11-212ENST00000556639 HK3P52790 923 aa13.63□□□□□ -0.23
EFCAB11-212ENST00000556639 CTSCP53634 463 aa13.63□□□□□ -0.23
EFCAB11-212ENST00000556639 ARL13AQ5H913 290 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms