RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 ZSCAN32Q9NX65 697 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 SLC17A6Q9P2U8 582 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 RAB23Q9ULC3 237 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 SLC39A10Q9ULF5 831 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 PCDHGA2Q9Y5H1 932 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 PSAT1Q9Y617 370 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 TRIOO75962 3097 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 BPTFQ12830 3046 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 IGLV3-16A0A075B6K0 115 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 A0A087X1B8 175 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 METTL12A8MUP2 240 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 TRIM49D1C9J1S8 452 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 GPR39O43194 453 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 DNAJC6O75061 913 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 CDK14O94921 469 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 S1PR4O95977 384 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 AHSGP02765 367 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 MPOP05164 745 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 IGHV4-34P06331 123 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 APOA4P06727 396 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 GM2AP17900 193 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 AVPR2P30518 371 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 FMO4P31512 558 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 MAPK9P45984 424 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 DHPSP49366 369 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-220ENST00000555634 BLKP51451 505 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 C21orf59P57076 290 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 RAB10P61026 200 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 BMPR2Q13873 1038 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 SEMA3AQ14563 771 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 NFATC4Q14934 902 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 ANGPT1Q15389 498 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 UBAP2Q5T6F2 1119 aaKnown RBP11.07□□□□□ -0.64
SHMT2-220ENST00000555634 MACC1Q6ZN28 852 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 RFLNAQ6ZTI6 216 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 DET1Q7L5Y6 550 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 LDB1Q86U70 411 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-220ENST00000555634 LCA5Q86VQ0 697 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 GALNT13Q8IUC8 556 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 SRRM1Q8IYB3 904 aaKnown RBP11.07□□□□□ -0.64
SHMT2-220ENST00000555634 PIANPQ8IYJ0 282 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 ACMSDQ8TDX5 336 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 CENPTQ96BT3 561 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 ALKBH8Q96BT7 664 aaKnown RBP11.07□□□□□ -0.64
SHMT2-220ENST00000555634 NDNQ99608 321 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 APOOQ9BUR5 198 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 TEX101Q9BY14 249 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 DUSP15Q9H1R2 295 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-220ENST00000555634 OR2AG1Q9H205 316 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 EPHX3Q9H6B9 360 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 SYTL2Q9HCH5 934 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 SMYD2Q9NRG4 433 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 CTNNAL1Q9UBT7 734 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 KLQ9UEF7 1012 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 MOSPD1Q9UJG1 213 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 INVSQ9Y283 1065 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 ANKRD6Q9Y2G4 727 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 OR1A2Q9Y585 309 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 HS3ST3A1Q9Y663 406 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 FANCMQ8IYD8 2048 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 CACNA1IQ9P0X4 2223 aa11.07□□□□□ -0.64
SHMT2-220ENST00000555634 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.06□□□□□ -0.64
SHMT2-220ENST00000555634 H3BM21 787 aa11.06□□□□□ -0.64
SHMT2-220ENST00000555634 K7ESM1 405 aa11.06□□□□□ -0.64
SHMT2-220ENST00000555634 TPP1O14773 563 aa11.06□□□□□ -0.64
SHMT2-220ENST00000555634 KMOO15229 486 aa11.06□□□□□ -0.64
SHMT2-220ENST00000555634 PIAS1O75925 651 aa11.06□□□□□ -0.64
SHMT2-220ENST00000555634 HAUS5O94927 633 aa11.06□□□□□ -0.64
SHMT2-220ENST00000555634 HOXC4P09017 264 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-220ENST00000555634 CDKN1CP49918 316 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-220ENST00000555634 AFF3P51826 1226 aaKnown RBP11.06□□□□□ -0.64
SHMT2-220ENST00000555634 RACK1P63244 317 aaKnown RBP11.06□□□□□ -0.64
SHMT2-220ENST00000555634 PLOD1Q02809 727 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-220ENST00000555634 TMEM115Q12893 351 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-220ENST00000555634 PDE1CQ14123 709 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-220ENST00000555634 BOP1Q14137 746 aaKnown RBP11.06□□□□□ -0.64
SHMT2-220ENST00000555634 INSCQ1MX18 579 aa11.06□□□□□ -0.64
SHMT2-220ENST00000555634 HECTD2Q5U5R9 776 aa11.06□□□□□ -0.64
SHMT2-220ENST00000555634 AGBL2Q5U5Z8 902 aa11.06□□□□□ -0.64
SHMT2-220ENST00000555634 CNSTQ6PJW8 725 aa11.06□□□□□ -0.64
SHMT2-220ENST00000555634 MTERF4Q7Z6M4 381 aaKnown RBP11.06□□□□□ -0.64
SHMT2-220ENST00000555634 LRRTM4Q86VH4 590 aa11.06□□□□□ -0.64
SHMT2-220ENST00000555634 IQCHQ86VS3 1027 aa11.06□□□□□ -0.64
SHMT2-220ENST00000555634 TMEFF1Q8IYR6 380 aa11.06□□□□□ -0.64
SHMT2-220ENST00000555634 DCLK2Q8N568 766 aa11.06□□□□□ -0.64
SHMT2-220ENST00000555634 PLA2G15Q8NCC3 412 aa11.06□□□□□ -0.64
SHMT2-220ENST00000555634 OR56A4Q8NGH8 313 aa11.06□□□□□ -0.64
SHMT2-220ENST00000555634 SREK1Q8WXA9 508 aaKnown RBP11.06□□□□□ -0.64
SHMT2-220ENST00000555634 KLHDC7BQ96G42 594 aa11.06□□□□□ -0.64
SHMT2-220ENST00000555634 ATP6V1G3Q96LB4 118 aa11.06□□□□□ -0.64
SHMT2-220ENST00000555634 AARSD1Q9BTE6 412 aaKnown RBP11.06□□□□□ -0.64
SHMT2-220ENST00000555634 GPAMQ9HCL2 828 aa11.06□□□□□ -0.64
SHMT2-220ENST00000555634 SARS2Q9NP81 518 aaKnown RBP11.06□□□□□ -0.64
SHMT2-220ENST00000555634 SNX15Q9NRS6 342 aa11.06□□□□□ -0.64
SHMT2-220ENST00000555634 SPATS2LQ9NUQ6 558 aaKnown RBP11.06□□□□□ -0.64
SHMT2-220ENST00000555634 ZNF446Q9NWS9 450 aa11.06□□□□□ -0.64
SHMT2-220ENST00000555634 GPR34Q9UPC5 381 aa11.06□□□□□ -0.64
SHMT2-220ENST00000555634 VWA7Q9Y334 891 aa11.06□□□□□ -0.64
SHMT2-220ENST00000555634 ACTL7BQ9Y614 415 aa11.06□□□□□ -0.64
SHMT2-220ENST00000555634 NFS1Q9Y697 457 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms