RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 TTC25Q96NG3 672 aa9.55□□□□□ -0.88
ACTN1-215ENST00000555616 DEPDC7Q96QD5 511 aa9.55□□□□□ -0.88
ACTN1-215ENST00000555616 SRPK1Q96SB4 655 aaKnown RBP9.55□□□□□ -0.88
ACTN1-215ENST00000555616 NAT9Q9BTE0 207 aa9.55□□□□□ -0.88
ACTN1-215ENST00000555616 ABCG8Q9H221 673 aa9.55□□□□□ -0.88
ACTN1-215ENST00000555616 CYP4F12Q9HCS2 524 aa9.55□□□□□ -0.88
ACTN1-215ENST00000555616 SAYSD1Q9NPB0 183 aa9.55□□□□□ -0.88
ACTN1-215ENST00000555616 MRPL40Q9NQ50 206 aaKnown RBP9.55□□□□□ -0.88
ACTN1-215ENST00000555616 TRNAU1APQ9NX07 287 aaKnown RBP9.55□□□□□ -0.88
ACTN1-215ENST00000555616 NFKBIL1Q9UBC1 381 aaPredicted RBP9.55□□□□□ -0.88
ACTN1-215ENST00000555616 CD84Q9UIB8 345 aa9.55□□□□□ -0.88
ACTN1-215ENST00000555616 PADI4Q9UM07 663 aa9.55□□□□□ -0.88
ACTN1-215ENST00000555616 GPR34Q9UPC5 381 aa9.55□□□□□ -0.88
ACTN1-215ENST00000555616 DOLKQ9UPQ8 538 aa9.55□□□□□ -0.88
ACTN1-215ENST00000555616 COL27A1Q8IZC6 1860 aaPredicted RBP9.55□□□□□ -0.88
ACTN1-215ENST00000555616 MAGEB16A2A368 324 aa9.54□□□□□ -0.88
ACTN1-215ENST00000555616 E7ESA3 106 aa9.54□□□□□ -0.88
ACTN1-215ENST00000555616 AVILO75366 819 aa9.54□□□□□ -0.88
ACTN1-215ENST00000555616 TCEA3O75764 348 aa9.54□□□□□ -0.88
ACTN1-215ENST00000555616 CLDN7O95471 211 aa9.54□□□□□ -0.88
ACTN1-215ENST00000555616 FUCA1P04066 466 aa9.54□□□□□ -0.88
ACTN1-215ENST00000555616 FAM153BP0C7A2 387 aa9.54□□□□□ -0.88
ACTN1-215ENST00000555616 MGAT1P26572 445 aa9.54□□□□□ -0.88
ACTN1-215ENST00000555616 MAGEA4P43358 317 aa9.54□□□□□ -0.88
ACTN1-215ENST00000555616 GPR1P46091 355 aa9.54□□□□□ -0.88
ACTN1-215ENST00000555616 SPINT3P49223 89 aa9.54□□□□□ -0.88
ACTN1-215ENST00000555616 DCDC1P59894 354 aa9.54□□□□□ -0.88
ACTN1-215ENST00000555616 CYP4F3Q08477 520 aa9.54□□□□□ -0.88
ACTN1-215ENST00000555616 ILF3Q12906 894 aaKnown RBP eCLIP9.54□□□□□ -0.88
ACTN1-215ENST00000555616 OLIG2Q13516 323 aa9.54□□□□□ -0.88
ACTN1-215ENST00000555616 GALNT3Q14435 633 aa9.54□□□□□ -0.88
ACTN1-215ENST00000555616 FAM153CQ494X1 144 aa9.54□□□□□ -0.88
ACTN1-215ENST00000555616 FNBP1LQ5T0N5 605 aa9.54□□□□□ -0.88
ACTN1-215ENST00000555616 HENMT1Q5T8I9 393 aaKnown RBP9.54□□□□□ -0.88
ACTN1-215ENST00000555616 OGFOD3Q6PK18 319 aa9.54□□□□□ -0.88
ACTN1-215ENST00000555616 TRMT10CQ7L0Y3 403 aaKnown RBP9.54□□□□□ -0.88
ACTN1-215ENST00000555616 LYSMD3Q7Z3D4 306 aa9.54□□□□□ -0.88
ACTN1-215ENST00000555616 RELL1Q8IUW5 271 aa9.54□□□□□ -0.88
ACTN1-215ENST00000555616 CCNJLQ8IV13 435 aa9.54□□□□□ -0.88
ACTN1-215ENST00000555616 PPHLN1Q8NEY8 458 aaKnown RBP9.54□□□□□ -0.88
ACTN1-215ENST00000555616 WDR48Q8TAF3 677 aa9.54□□□□□ -0.88
ACTN1-215ENST00000555616 GPBAR1Q8TDU6 330 aa9.54□□□□□ -0.88
ACTN1-215ENST00000555616 PYROXD1Q8WU10 500 aa9.54□□□□□ -0.88
ACTN1-215ENST00000555616 EID2BQ96D98 161 aa9.54□□□□□ -0.88
ACTN1-215ENST00000555616 STAMBPL1Q96FJ0 436 aa9.54□□□□□ -0.88
ACTN1-215ENST00000555616 COX14Q96I36 57 aa9.54□□□□□ -0.88
ACTN1-215ENST00000555616 AGAP2Q99490 1192 aa9.54□□□□□ -0.88
ACTN1-215ENST00000555616 RIOK2Q9BVS4 552 aaKnown RBP9.54□□□□□ -0.88
ACTN1-215ENST00000555616 TMEM168Q9H0V1 697 aa9.54□□□□□ -0.88
ACTN1-215ENST00000555616 ABCG4Q9H172 646 aa9.54□□□□□ -0.88
ACTN1-215ENST00000555616 CARS2Q9HA77 564 aaKnown RBP9.54□□□□□ -0.88
ACTN1-215ENST00000555616 PIH1D1Q9NWS0 290 aaKnown RBP9.54□□□□□ -0.88
ACTN1-215ENST00000555616 HACD3Q9P035 362 aa9.54□□□□□ -0.88
ACTN1-215ENST00000555616 SIRPGQ9P1W8 387 aa9.54□□□□□ -0.88
ACTN1-215ENST00000555616 SUFUQ9UMX1 484 aa9.54□□□□□ -0.88
ACTN1-215ENST00000555616 PCDHB1Q9Y5F3 818 aa9.54□□□□□ -0.88
ACTN1-215ENST00000555616 MAD1L1Q9Y6D9 718 aa9.54□□□□□ -0.88
ACTN1-215ENST00000555616 HEATR9A2RTY3 570 aa9.53□□□□□ -0.88
ACTN1-215ENST00000555616 NTN3O00634 580 aaPredicted RBP9.53□□□□□ -0.88
ACTN1-215ENST00000555616 NOBOXO60393 691 aa9.53□□□□□ -0.88
ACTN1-215ENST00000555616 CSO75390 466 aaKnown RBP9.53□□□□□ -0.88
ACTN1-215ENST00000555616 SPAG6O75602 509 aa9.53□□□□□ -0.88
ACTN1-215ENST00000555616 TTC4O95801 387 aa9.53□□□□□ -0.88
ACTN1-215ENST00000555616 POLBP06746 335 aa9.53□□□□□ -0.88
ACTN1-215ENST00000555616 TPH1P17752 444 aa9.53□□□□□ -0.88
ACTN1-215ENST00000555616 PGAM1P18669 254 aa9.53□□□□□ -0.88
ACTN1-215ENST00000555616 ELK3P41970 407 aa9.53□□□□□ -0.88
ACTN1-215ENST00000555616 CHRNA4P43681 627 aa9.53□□□□□ -0.88
ACTN1-215ENST00000555616 GNPDA1P46926 289 aa9.53□□□□□ -0.88
ACTN1-215ENST00000555616 PDX1P52945 283 aa9.53□□□□□ -0.88
ACTN1-215ENST00000555616 PMS2P54278 862 aa9.53□□□□□ -0.88
ACTN1-215ENST00000555616 PDE1BQ01064 536 aa9.53□□□□□ -0.88
ACTN1-215ENST00000555616 LRP8Q14114 963 aa9.53□□□□□ -0.88
ACTN1-215ENST00000555616 SEPT6Q14141 434 aa9.53□□□□□ -0.88
ACTN1-215ENST00000555616 POU6F1Q14863 301 aa9.53□□□□□ -0.88
ACTN1-215ENST00000555616 ISXQ2M1V0 245 aa9.53□□□□□ -0.88
ACTN1-215ENST00000555616 MSS51Q4VC12 460 aa9.53□□□□□ -0.88
ACTN1-215ENST00000555616 C14orf28Q4W4Y0 310 aa9.53□□□□□ -0.88
ACTN1-215ENST00000555616 PCID2Q5JVF3 399 aa9.53□□□□□ -0.88
ACTN1-215ENST00000555616 BEND6Q5SZJ8 279 aaPredicted RBP9.53□□□□□ -0.88
ACTN1-215ENST00000555616 CERCAMQ5T4B2 595 aa9.53□□□□□ -0.88
ACTN1-215ENST00000555616 DENND5AQ6IQ26 1287 aa9.53□□□□□ -0.88
ACTN1-215ENST00000555616 RBM44Q6ZP01 1051 aaKnown RBP9.53□□□□□ -0.88
ACTN1-215ENST00000555616 NLRP9Q7RTR0 991 aa9.53□□□□□ -0.88
ACTN1-215ENST00000555616 TAF8Q7Z7C8 310 aa9.53□□□□□ -0.88
ACTN1-215ENST00000555616 TRIM74Q86UV6 250 aa9.53□□□□□ -0.88
ACTN1-215ENST00000555616 C17orf82Q86X59 251 aaPredicted RBP9.53□□□□□ -0.88
ACTN1-215ENST00000555616 NRROSQ86YC3 692 aa9.53□□□□□ -0.88
ACTN1-215ENST00000555616 PALM2Q8IXS6 379 aa9.53□□□□□ -0.88
ACTN1-215ENST00000555616 FBXO36Q8NEA4 188 aa9.53□□□□□ -0.88
ACTN1-215ENST00000555616 FAM46DQ8NEK8 389 aa9.53□□□□□ -0.88
ACTN1-215ENST00000555616 OR6C4Q8NGE1 309 aa9.53□□□□□ -0.88
ACTN1-215ENST00000555616 CCL4L1Q8NHW4 92 aa9.53□□□□□ -0.88
ACTN1-215ENST00000555616 BLOC1S5Q8TDH9 187 aa9.53□□□□□ -0.88
ACTN1-215ENST00000555616 CCDC74AQ96AQ1 378 aa9.53□□□□□ -0.88
ACTN1-215ENST00000555616 GRAMD1AQ96CP6 724 aa9.53□□□□□ -0.88
ACTN1-215ENST00000555616 HIC2Q96JB3 615 aa9.53□□□□□ -0.88
ACTN1-215ENST00000555616 PWWP2AQ96N64 755 aa9.53□□□□□ -0.88
ACTN1-215ENST00000555616 OR2M4Q96R27 311 aa9.53□□□□□ -0.88
ACTN1-215ENST00000555616 RANBP9Q96S59 729 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms