RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 LRRTM4Q86VH4 590 aa13.48□□□□□ -0.25
SNX6-203ENST00000555416 DDHD1Q8NEL9 900 aa13.48□□□□□ -0.25
SNX6-203ENST00000555416 OR6C4Q8NGE1 309 aa13.48□□□□□ -0.25
SNX6-203ENST00000555416 ZNF398Q8TD17 642 aa13.48□□□□□ -0.25
SNX6-203ENST00000555416 NXPE2Q96DL1 559 aa13.48□□□□□ -0.25
SNX6-203ENST00000555416 PPP1R2P1Q96PQ5 205 aa13.48□□□□□ -0.25
SNX6-203ENST00000555416 GFM1Q96RP9 751 aaKnown RBP13.48□□□□□ -0.25
SNX6-203ENST00000555416 NUDT22Q9BRQ3 303 aa13.48□□□□□ -0.25
SNX6-203ENST00000555416 OSGEPL1Q9H4B0 414 aa13.48□□□□□ -0.25
SNX6-203ENST00000555416 RDH14Q9HBH5 336 aa13.48□□□□□ -0.25
SNX6-203ENST00000555416 SMOXQ9NWM0 555 aa13.48□□□□□ -0.25
SNX6-203ENST00000555416 SATB2Q9UPW6 733 aa13.48□□□□□ -0.25
SNX6-203ENST00000555416 DNAJC16Q9Y2G8 782 aa13.48□□□□□ -0.25
SNX6-203ENST00000555416 RHPN2P1A8MT19 583 aa13.47□□□□□ -0.25
SNX6-203ENST00000555416 KMOO15229 486 aa13.47□□□□□ -0.25
SNX6-203ENST00000555416 SGTAO43765 313 aa13.47□□□□□ -0.25
SNX6-203ENST00000555416 PPFIA2O75334 1257 aa13.47□□□□□ -0.25
SNX6-203ENST00000555416 CRTAMO95727 393 aa13.47□□□□□ -0.25
SNX6-203ENST00000555416 HOXB3P14651 431 aaPredicted RBP13.47□□□□□ -0.25
SNX6-203ENST00000555416 BRAFP15056 766 aa13.47□□□□□ -0.25
SNX6-203ENST00000555416 CSF2RBP32927 897 aa13.47□□□□□ -0.25
SNX6-203ENST00000555416 ARSDP51689 593 aa13.47□□□□□ -0.25
SNX6-203ENST00000555416 GABREP78334 506 aa13.47□□□□□ -0.25
SNX6-203ENST00000555416 NFATC2Q13469 925 aa13.47□□□□□ -0.25
SNX6-203ENST00000555416 SEMA5AQ13591 1074 aa13.47□□□□□ -0.25
SNX6-203ENST00000555416 SEPT6Q14141 434 aa13.47□□□□□ -0.25
SNX6-203ENST00000555416 LONRF2Q1L5Z9 754 aa13.47□□□□□ -0.25
SNX6-203ENST00000555416 CCDC38Q502W7 563 aa13.47□□□□□ -0.25
SNX6-203ENST00000555416 C3orf38Q5JPI3 329 aa13.47□□□□□ -0.25
SNX6-203ENST00000555416 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.47□□□□□ -0.25
SNX6-203ENST00000555416 TTC27Q6P3X3 843 aa13.47□□□□□ -0.25
SNX6-203ENST00000555416 DRICH1Q6PGQ1 229 aaPredicted RBP13.47□□□□□ -0.25
SNX6-203ENST00000555416 XKR5Q6UX68 686 aa13.47□□□□□ -0.25
SNX6-203ENST00000555416 FAM83HQ6ZRV2 1179 aaPredicted RBP13.47□□□□□ -0.25
SNX6-203ENST00000555416 DET1Q7L5Y6 550 aa13.47□□□□□ -0.25
SNX6-203ENST00000555416 TRAPPC5Q8IUR0 188 aa13.47□□□□□ -0.25
SNX6-203ENST00000555416 COG1Q8WTW3 980 aa13.47□□□□□ -0.25
SNX6-203ENST00000555416 SEMA6CQ9H3T2 930 aa13.47□□□□□ -0.25
SNX6-203ENST00000555416 RAB6BQ9NRW1 208 aa13.47□□□□□ -0.25
SNX6-203ENST00000555416 PYCARDQ9ULZ3 195 aa13.47□□□□□ -0.25
SNX6-203ENST00000555416 DRG1Q9Y295 367 aaKnown RBP13.47□□□□□ -0.25
SNX6-203ENST00000555416 LAMA5O15230 3695 aa13.47□□□□□ -0.25
SNX6-203ENST00000555416 URB1O60287 2271 aaKnown RBP13.47□□□□□ -0.25
SNX6-203ENST00000555416 IGHV1OR21-1A0A087WYE8 117 aa13.46□□□□□ -0.25
SNX6-203ENST00000555416 OR2AG2A6NM03 316 aa13.46□□□□□ -0.25
SNX6-203ENST00000555416 AGAP14A8MT82 685 aa13.46□□□□□ -0.25
SNX6-203ENST00000555416 GPR89AB7ZAQ6 455 aa13.46□□□□□ -0.25
SNX6-203ENST00000555416 SUN1O94901 812 aa13.46□□□□□ -0.25
SNX6-203ENST00000555416 GPR89BP0CG08 455 aa13.46□□□□□ -0.25
SNX6-203ENST00000555416 F3P13726 295 aa13.46□□□□□ -0.25
SNX6-203ENST00000555416 HGFP14210 728 aa13.46□□□□□ -0.25
SNX6-203ENST00000555416 RPL10P27635 214 aaKnown RBP13.46□□□□□ -0.25
SNX6-203ENST00000555416 FDFT1P37268 417 aa13.46□□□□□ -0.25
SNX6-203ENST00000555416 FASLGP48023 281 aa13.46□□□□□ -0.25
SNX6-203ENST00000555416 LSSP48449 732 aa13.46□□□□□ -0.25
SNX6-203ENST00000555416 CLCNKAP51800 687 aa13.46□□□□□ -0.25
SNX6-203ENST00000555416 DRG2P55039 364 aaKnown RBP13.46□□□□□ -0.25
SNX6-203ENST00000555416 ZFP36L1Q07352 338 aaKnown RBP13.46□□□□□ -0.25
SNX6-203ENST00000555416 SEPT7Q16181 437 aaKnown RBP13.46□□□□□ -0.25
SNX6-203ENST00000555416 INSCQ1MX18 579 aa13.46□□□□□ -0.25
SNX6-203ENST00000555416 LDLRAP1Q5SW96 308 aa13.46□□□□□ -0.25
SNX6-203ENST00000555416 TMEM220Q6QAJ8 160 aa13.46□□□□□ -0.25
SNX6-203ENST00000555416 SLITRK4Q8IW52 837 aa13.46□□□□□ -0.25
SNX6-203ENST00000555416 RASGEF1CQ8N431 466 aa13.46□□□□□ -0.25
SNX6-203ENST00000555416 BEND7Q8N7W2 519 aaPredicted RBP13.46□□□□□ -0.25
SNX6-203ENST00000555416 WDR48Q8TAF3 677 aa13.46□□□□□ -0.25
SNX6-203ENST00000555416 SGF29Q96ES7 293 aa13.46□□□□□ -0.25
SNX6-203ENST00000555416 TIMM29Q9BSF4 260 aa13.46□□□□□ -0.25
SNX6-203ENST00000555416 ASB8Q9H765 288 aa13.46□□□□□ -0.25
SNX6-203ENST00000555416 POLR1BQ9H9Y6 1135 aa13.46□□□□□ -0.25
SNX6-203ENST00000555416 EPB41L5Q9HCM4 733 aa13.46□□□□□ -0.25
SNX6-203ENST00000555416 ASCL3Q9NQ33 180 aa13.46□□□□□ -0.25
SNX6-203ENST00000555416 NLE1Q9NVX2 485 aaPredicted RBP13.46□□□□□ -0.25
SNX6-203ENST00000555416 TMEM9Q9P0T7 183 aa13.46□□□□□ -0.25
SNX6-203ENST00000555416 ZNF624Q9P2J8 865 aaPredicted RBP13.46□□□□□ -0.25
SNX6-203ENST00000555416 SLC2A6Q9UGQ3 507 aa13.46□□□□□ -0.25
SNX6-203ENST00000555416 FEZ2Q9UHY8 353 aaPredicted RBP13.46□□□□□ -0.25
SNX6-203ENST00000555416 WDR37Q9Y2I8 494 aa13.46□□□□□ -0.25
SNX6-203ENST00000555416 JRKLQ9Y4A0 524 aa13.46□□□□□ -0.25
SNX6-203ENST00000555416 MROH6A6NGR9 719 aa13.45□□□□□ -0.26
SNX6-203ENST00000555416 OR51F1A6NGY5 319 aa13.45□□□□□ -0.26
SNX6-203ENST00000555416 PSMD3O43242 534 aa13.45□□□□□ -0.26
SNX6-203ENST00000555416 POP7O75817 140 aaKnown RBP13.45□□□□□ -0.26
SNX6-203ENST00000555416 APRTP07741 180 aa13.45□□□□□ -0.26
SNX6-203ENST00000555416 MPSTP25325 297 aa13.45□□□□□ -0.26
SNX6-203ENST00000555416 PSMA3P25788 255 aa13.45□□□□□ -0.26
SNX6-203ENST00000555416 PBLDP30039 288 aaPredicted RBP13.45□□□□□ -0.26
SNX6-203ENST00000555416 MC4RP32245 332 aa13.45□□□□□ -0.26
SNX6-203ENST00000555416 GPR3P46089 330 aa13.45□□□□□ -0.26
SNX6-203ENST00000555416 INHBCP55103 352 aa13.45□□□□□ -0.26
SNX6-203ENST00000555416 UBE2IP63279 158 aaKnown RBP13.45□□□□□ -0.26
SNX6-203ENST00000555416 ITGA9Q13797 1035 aa13.45□□□□□ -0.26
SNX6-203ENST00000555416 FNBP1LQ5T0N5 605 aa13.45□□□□□ -0.26
SNX6-203ENST00000555416 PIANPQ8IYJ0 282 aa13.45□□□□□ -0.26
SNX6-203ENST00000555416 CCDC89Q8N998 374 aa13.45□□□□□ -0.26
SNX6-203ENST00000555416 CDKN2AIPNLQ96HQ2 116 aa13.45□□□□□ -0.26
SNX6-203ENST00000555416 ZNF778Q96MU6 729 aa13.45□□□□□ -0.26
SNX6-203ENST00000555416 AP1M1Q9BXS5 423 aa13.45□□□□□ -0.26
SNX6-203ENST00000555416 CASS4Q9NQ75 786 aa13.45□□□□□ -0.26
SNX6-203ENST00000555416 PAK5Q9P286 719 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms