RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 EIF2B3Q9NR50 452 aaKnown RBP11.94□□□□□ -0.5
SRP54-206ENST00000555317 NLE1Q9NVX2 485 aaPredicted RBP11.94□□□□□ -0.5
SRP54-206ENST00000555317 PYCARDQ9ULZ3 195 aa11.94□□□□□ -0.5
SRP54-206ENST00000555317 AK5Q9Y6K8 562 aa11.94□□□□□ -0.5
SRP54-206ENST00000555317 RNF215Q9Y6U7 377 aa11.94□□□□□ -0.5
SRP54-206ENST00000555317 CCDC78A2IDD5 438 aa11.93□□□□□ -0.5
SRP54-206ENST00000555317 CTAGE9A4FU28 777 aa11.93□□□□□ -0.5
SRP54-206ENST00000555317 OR5K4A6NMS3 321 aa11.93□□□□□ -0.5
SRP54-206ENST00000555317 PDZK1P1A8MUH7 402 aa11.93□□□□□ -0.5
SRP54-206ENST00000555317 TMX2-CTNND1H3BSU7 103 aa11.93□□□□□ -0.5
SRP54-206ENST00000555317 CCL22O00626 93 aa11.93□□□□□ -0.5
SRP54-206ENST00000555317 GAPDHSO14556 408 aaPredicted RBP11.93□□□□□ -0.5
SRP54-206ENST00000555317 CHUKO15111 745 aa11.93□□□□□ -0.5
SRP54-206ENST00000555317 LDB2O43679 373 aa11.93□□□□□ -0.5
SRP54-206ENST00000555317 PROS1P07225 676 aa11.93□□□□□ -0.5
SRP54-206ENST00000555317 F3P13726 295 aa11.93□□□□□ -0.5
SRP54-206ENST00000555317 IDSP22304 550 aa11.93□□□□□ -0.5
SRP54-206ENST00000555317 ALDH4A1P30038 563 aa11.93□□□□□ -0.5
SRP54-206ENST00000555317 VPS41P49754 854 aa11.93□□□□□ -0.5
SRP54-206ENST00000555317 CCL7P80098 99 aa11.93□□□□□ -0.5
SRP54-206ENST00000555317 GPS1Q13098 491 aa11.93□□□□□ -0.5
SRP54-206ENST00000555317 TRIP13Q15645 432 aaPredicted RBP11.93□□□□□ -0.5
SRP54-206ENST00000555317 SEPT7Q16181 437 aaKnown RBP11.93□□□□□ -0.5
SRP54-206ENST00000555317 AMZ1Q400G9 498 aa11.93□□□□□ -0.5
SRP54-206ENST00000555317 MAP9Q49MG5 647 aa11.93□□□□□ -0.5
SRP54-206ENST00000555317 GPR33Q49SQ1 333 aa11.93□□□□□ -0.5
SRP54-206ENST00000555317 KHDC1Q4VXA5 237 aaKnown RBP11.93□□□□□ -0.5
SRP54-206ENST00000555317 CCDC38Q502W7 563 aa11.93□□□□□ -0.5
SRP54-206ENST00000555317 CDCP2Q5VXM1 449 aa11.93□□□□□ -0.5
SRP54-206ENST00000555317 CCDC137Q6PK04 289 aaKnown RBP11.93□□□□□ -0.5
SRP54-206ENST00000555317 DET1Q7L5Y6 550 aa11.93□□□□□ -0.5
SRP54-206ENST00000555317 SPRED1Q7Z699 444 aa11.93□□□□□ -0.5
SRP54-206ENST00000555317 SLC9B2Q86UD5 537 aa11.93□□□□□ -0.5
SRP54-206ENST00000555317 SFTPA2Q8IWL1 248 aa11.93□□□□□ -0.5
SRP54-206ENST00000555317 NAGSQ8N159 534 aa11.93□□□□□ -0.5
SRP54-206ENST00000555317 ARL14Q8N4G2 192 aa11.93□□□□□ -0.5
SRP54-206ENST00000555317 GLIS1Q8NBF1 620 aa11.93□□□□□ -0.5
SRP54-206ENST00000555317 PATE1Q8WXA2 126 aa11.93□□□□□ -0.5
SRP54-206ENST00000555317 GRAMD1AQ96CP6 724 aa11.93□□□□□ -0.5
SRP54-206ENST00000555317 COPS8Q99627 209 aa11.93□□□□□ -0.5
SRP54-206ENST00000555317 LRRN3Q9H3W5 708 aa11.93□□□□□ -0.5
SRP54-206ENST00000555317 TBC1D29Q9UFV1 150 aa11.93□□□□□ -0.5
SRP54-206ENST00000555317 DMXL2Q8TDJ6 3036 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 TRBV23OR9-2A0A075B6M9 112 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 KIR2DS5A0A0G2JLQ3 304 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 A0A0G2JNG1 304 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 TRABD2BA6NFA1 517 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 OR2AG2A6NM03 316 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 D6RAR5 112 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 KIR2DS3K7RE56 304 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 KCNJ13O60928 360 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 PHF2O75151 1096 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 KRT14P02533 472 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 ADRA1DP25100 572 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 PBLDP30039 288 aaPredicted RBP11.92□□□□□ -0.5
SRP54-206ENST00000555317 COILP38432 576 aaPredicted RBP11.92□□□□□ -0.5
SRP54-206ENST00000555317 HALP42357 657 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 GPR3P46089 330 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 FNTAP49354 379 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 CLCNKAP51800 687 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 TERF1P54274 439 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 SESN2P58004 480 aaPredicted RBP11.92□□□□□ -0.5
SRP54-206ENST00000555317 CDK16Q00536 496 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 HHEXQ03014 270 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 CACNG1Q06432 222 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 MSLNQ13421 630 aaPredicted RBP11.92□□□□□ -0.5
SRP54-206ENST00000555317 KIR2DS5Q14953 304 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 PPP1R7Q15435 360 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 ST3GAL2Q16842 350 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 ISXQ2M1V0 245 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 FNBP1LQ5T0N5 605 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 TMEM220Q6QAJ8 160 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 AMZ2Q86W34 360 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 NXPE1Q8N323 547 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 SFRP1Q8N474 314 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 RASGEF1AQ8N9B8 481 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 SLC37A2Q8TED4 501 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 SH3KBP1Q96B97 665 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 AHCYL2Q96HN2 611 aaKnown RBP11.92□□□□□ -0.5
SRP54-206ENST00000555317 CAPZA3Q96KX2 299 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 TTC1Q99614 292 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 SLC38A3Q99624 504 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 STRADBQ9C0K7 418 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 NRSN2Q9GZP1 204 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 FAM96AQ9H5X1 160 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 VPS37BQ9H9H4 285 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 CASS4Q9NQ75 786 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 PRDM8Q9NQV8 689 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 KCNK4Q9NYG8 393 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 SMARCAL1Q9NZC9 954 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 BFARQ9NZS9 450 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 RABGEF1Q9UJ41 708 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 TMPRSS11EQ9UL52 423 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 PCYT1BQ9Y5K3 369 aaPredicted RBP11.92□□□□□ -0.5
SRP54-206ENST00000555317 ST14Q9Y5Y6 855 aa11.92□□□□□ -0.5
SRP54-206ENST00000555317 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.92□□□□□ -0.5
SRP54-206ENST00000555317 PIKFYVEQ9Y2I7 2098 aa11.91□□□□□ -0.5
SRP54-206ENST00000555317 DSPP15924 2871 aaKnown RBP11.91□□□□□ -0.5
SRP54-206ENST00000555317 KLHL33A6NCF5 533 aa11.91□□□□□ -0.5
SRP54-206ENST00000555317 MROH6A6NGR9 719 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms