RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 TRAM1L1Q8N609 369 aa10.65□□□□□ -0.71
TDP1-211ENST00000555178 BEND7Q8N7W2 519 aaPredicted RBP10.65□□□□□ -0.71
TDP1-211ENST00000555178 MGARPQ8TDB4 240 aa10.65□□□□□ -0.71
TDP1-211ENST00000555178 MTBPQ96DY7 904 aa10.65□□□□□ -0.71
TDP1-211ENST00000555178 SLC30A3Q99726 388 aa10.65□□□□□ -0.71
TDP1-211ENST00000555178 KCNK9Q9NPC2 374 aa10.65□□□□□ -0.71
TDP1-211ENST00000555178 INTS10Q9NVR2 710 aaKnown RBP10.65□□□□□ -0.71
TDP1-211ENST00000555178 EIF2B4Q9UI10 523 aaKnown RBP10.65□□□□□ -0.71
TDP1-211ENST00000555178 TMEM120BA0PK00 339 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 TMEM202A6NGA9 273 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 WNT1P04628 370 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 SP9P0CG40 484 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 SLC35E2BP0CK96 405 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 CNTFP26441 200 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 TYK2P29597 1187 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 ATP5DP30049 168 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 RPA3P35244 121 aaPredicted RBP10.64□□□□□ -0.71
TDP1-211ENST00000555178 MAGEA9P43362 315 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 MAGEA12P43365 314 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 GPR1P46091 355 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 SERPINB8P50452 374 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 CSRP3P50461 194 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 CTSCP53634 463 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 DPTQ07507 201 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 AGERQ15109 404 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 ANGPT1Q15389 498 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 TCEA2Q15560 299 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 AARS2Q5JTZ9 985 aaKnown RBP10.64□□□□□ -0.71
TDP1-211ENST00000555178 LGSNQ5TDP6 509 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 TTC19Q6DKK2 380 aaPredicted RBP10.64□□□□□ -0.71
TDP1-211ENST00000555178 DOK6Q6PKX4 331 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 TMEM207Q6UWW9 146 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 NRSN1Q8IZ57 195 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 ANKRD42Q8N9B4 389 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 BANPQ8N9N5 519 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 GDAP1Q8TB36 358 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 BTN2A2Q8WVV5 523 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 ISL2Q96A47 359 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 SGF29Q96ES7 293 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 HSPA12BQ96MM6 686 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 SLC6A18Q96N87 628 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 SMC6Q96SB8 1091 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 C19orf43Q9BQ61 176 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 AARSD1Q9BTE6 412 aaKnown RBP10.64□□□□□ -0.71
TDP1-211ENST00000555178 ZSCAN5AQ9BUG6 496 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 STMN4Q9H169 189 aaPredicted RBP10.64□□□□□ -0.71
TDP1-211ENST00000555178 P2RY12Q9H244 342 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 VPS11Q9H270 941 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 MRPL40Q9NQ50 206 aaKnown RBP10.64□□□□□ -0.71
TDP1-211ENST00000555178 SLC17A7Q9P2U7 560 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 NFKBIL1Q9UBC1 381 aaPredicted RBP10.64□□□□□ -0.71
TDP1-211ENST00000555178 CACNA1EQ15878 2313 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 A0A096LPK6 155 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 METTL12A8MUP2 240 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 TYROBPO43914 113 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 C2P06681 752 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 OXTRP30559 389 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 HOXA6P31267 233 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 CCNFP41002 786 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 PPP2R2AP63151 447 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 ITGA9Q13797 1035 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 ZKSCAN8Q15776 578 aaPredicted RBP10.64□□□□□ -0.71
TDP1-211ENST00000555178 LPAL2Q16609 132 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 GPR33Q49SQ1 333 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 ZDHHC20Q5W0Z9 365 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 NEK5Q6P3R8 708 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 TIFABQ6ZNK6 161 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 RAPH1Q70E73 1250 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 WDR5BQ86VZ2 330 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 SLC22A18ASQ8N1D0 253 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 RASGEF1AQ8N9B8 481 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 TMEM145Q8NBT3 493 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 GIMAP7Q8NHV1 300 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 NELL1Q92832 810 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 GLYATL1Q969I3 302 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.64□□□□□ -0.71
TDP1-211ENST00000555178 IER2Q9BTL4 223 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 KDM4CQ9H3R0 1056 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 TM7SF3Q9NS93 570 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 TMEM74BQ9NUR3 256 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 OGFRQ9NZT2 677 aa10.64□□□□□ -0.71
TDP1-211ENST00000555178 TSR3Q9UJK0 312 aaKnown RBP10.64□□□□□ -0.71
TDP1-211ENST00000555178 NDUFS2O75306 463 aa10.63□□□□□ -0.71
TDP1-211ENST00000555178 SLC25A14O95258 325 aaPredicted RBP10.63□□□□□ -0.71
TDP1-211ENST00000555178 FDXRP22570 491 aa10.63□□□□□ -0.71
TDP1-211ENST00000555178 ITPKAP23677 461 aa10.63□□□□□ -0.71
TDP1-211ENST00000555178 AKT1P31749 480 aa10.63□□□□□ -0.71
TDP1-211ENST00000555178 TRIM23P36406 574 aa10.63□□□□□ -0.71
TDP1-211ENST00000555178 PTPN5P54829 565 aa10.63□□□□□ -0.71
TDP1-211ENST00000555178 RAB10P61026 200 aa10.63□□□□□ -0.71
TDP1-211ENST00000555178 SLC18A2Q05940 514 aa10.63□□□□□ -0.71
TDP1-211ENST00000555178 DLG1Q12959 904 aa10.63□□□□□ -0.71
TDP1-211ENST00000555178 USP39Q53GS9 565 aaKnown RBP10.63□□□□□ -0.71
TDP1-211ENST00000555178 C16orf46Q6P387 395 aa10.63□□□□□ -0.71
TDP1-211ENST00000555178 XKR5Q6UX68 686 aa10.63□□□□□ -0.71
TDP1-211ENST00000555178 ZNF765Q7L2R6 523 aa10.63□□□□□ -0.71
TDP1-211ENST00000555178 ADGRG6Q86SQ4 1221 aa10.63□□□□□ -0.71
TDP1-211ENST00000555178 LILRA3Q8N6C8 439 aaPredicted RBP10.63□□□□□ -0.71
TDP1-211ENST00000555178 SIDT2Q8NBJ9 832 aaKnown RBP10.63□□□□□ -0.71
TDP1-211ENST00000555178 OR13H1Q8NG92 308 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms