RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 FGF4P08620 206 aa8.8□□□□□ -1
TDP1-210ENST00000554976 C7P10643 843 aa8.8□□□□□ -1
TDP1-210ENST00000554976 UGT1A6P19224 532 aa8.8□□□□□ -1
TDP1-210ENST00000554976 UGT1A1P22309 533 aa8.8□□□□□ -1
TDP1-210ENST00000554976 UGT1A4P22310 534 aa8.8□□□□□ -1
TDP1-210ENST00000554976 CALB2P22676 271 aa8.8□□□□□ -1
TDP1-210ENST00000554976 PTPN4P29074 926 aa8.8□□□□□ -1
TDP1-210ENST00000554976 UGT1A3P35503 534 aa8.8□□□□□ -1
TDP1-210ENST00000554976 UGT1A5P35504 534 aa8.8□□□□□ -1
TDP1-210ENST00000554976 CPOXP36551 454 aa8.8□□□□□ -1
TDP1-210ENST00000554976 RAD51Q06609 339 aa8.8□□□□□ -1
TDP1-210ENST00000554976 ASPHQ12797 758 aa8.8□□□□□ -1
TDP1-210ENST00000554976 EIF4HQ15056 248 aaKnown RBP8.8□□□□□ -1
TDP1-210ENST00000554976 TSNQ15631 228 aaKnown RBP8.8□□□□□ -1
TDP1-210ENST00000554976 ATP13A5Q4VNC0 1218 aa8.8□□□□□ -1
TDP1-210ENST00000554976 KANK2Q63ZY3 851 aa8.8□□□□□ -1
TDP1-210ENST00000554976 TMIEQ8NEW7 156 aa8.8□□□□□ -1
TDP1-210ENST00000554976 FBXO27Q8NI29 283 aa8.8□□□□□ -1
TDP1-210ENST00000554976 NSL1Q96IY1 281 aa8.8□□□□□ -1
TDP1-210ENST00000554976 MSLNLQ96KJ4 702 aa8.8□□□□□ -1
TDP1-210ENST00000554976 CCDC28BQ9BUN5 200 aa8.8□□□□□ -1
TDP1-210ENST00000554976 PCDH12Q9NPG4 1184 aa8.8□□□□□ -1
TDP1-210ENST00000554976 ZDHHC3Q9NYG2 299 aa8.8□□□□□ -1
TDP1-210ENST00000554976 KLHL42Q9P2K6 505 aa8.8□□□□□ -1
TDP1-210ENST00000554976 ASB1Q9Y576 335 aa8.8□□□□□ -1
TDP1-210ENST00000554976 FADS2P1A8MWK0 482 aa8.8□□□□□ -1
TDP1-210ENST00000554976 PRR5-ARHGAP8B1AHC4 643 aa8.8□□□□□ -1
TDP1-210ENST00000554976 SDHDO14521 159 aa8.8□□□□□ -1
TDP1-210ENST00000554976 CCDC22O60826 627 aa8.8□□□□□ -1
TDP1-210ENST00000554976 EIF2DP41214 584 aaKnown RBP8.8□□□□□ -1
TDP1-210ENST00000554976 ARHGAP8P85298 464 aa8.8□□□□□ -1
TDP1-210ENST00000554976 CREB5Q02930 508 aa8.8□□□□□ -1
TDP1-210ENST00000554976 DLX2Q07687 328 aaPredicted RBP8.8□□□□□ -1
TDP1-210ENST00000554976 LRRC73Q5JTD7 316 aa8.8□□□□□ -1
TDP1-210ENST00000554976 METTL21CQ5VZV1 264 aa8.8□□□□□ -1
TDP1-210ENST00000554976 CPNE9Q8IYJ1 553 aa8.8□□□□□ -1
TDP1-210ENST00000554976 RYBPQ8N488 228 aaPredicted RBP8.8□□□□□ -1
TDP1-210ENST00000554976 KIF2BQ8N4N8 673 aa8.8□□□□□ -1
TDP1-210ENST00000554976 HMGCLL1Q8TB92 370 aa8.8□□□□□ -1
TDP1-210ENST00000554976 ARRDC3Q96B67 414 aa8.8□□□□□ -1
TDP1-210ENST00000554976 ABHD8Q96I13 439 aa8.8□□□□□ -1
TDP1-210ENST00000554976 COQ10AQ96MF6 247 aa8.8□□□□□ -1
TDP1-210ENST00000554976 VPS35Q96QK1 796 aa8.8□□□□□ -1
TDP1-210ENST00000554976 TRMOQ9BU70 441 aa8.8□□□□□ -1
TDP1-210ENST00000554976 GNPTGQ9UJJ9 305 aa8.8□□□□□ -1
TDP1-210ENST00000554976 ZNF225Q9UK10 706 aa8.8□□□□□ -1
TDP1-210ENST00000554976 SLC30A1Q9Y6M5 507 aa8.8□□□□□ -1
TDP1-210ENST00000554976 C16orf96A6NNT2 1141 aa8.8□□□□□ -1
TDP1-210ENST00000554976 A8MX80 341 aa8.8□□□□□ -1
TDP1-210ENST00000554976 SLCO1B7G3V0H7 640 aa8.8□□□□□ -1
TDP1-210ENST00000554976 PYGLP06737 847 aa8.8□□□□□ -1
TDP1-210ENST00000554976 HNRNPLP14866 589 aaKnown RBP eCLIP8.8□□□□□ -1
TDP1-210ENST00000554976 ITGALP20701 1170 aa8.8□□□□□ -1
TDP1-210ENST00000554976 LTBRP36941 435 aa8.8□□□□□ -1
TDP1-210ENST00000554976 SH3BP2P78314 561 aa8.8□□□□□ -1
TDP1-210ENST00000554976 BTKQ06187 659 aa8.8□□□□□ -1
TDP1-210ENST00000554976 NAA25Q14CX7 972 aa8.8□□□□□ -1
TDP1-210ENST00000554976 HNRNPA1L2Q32P51 320 aaKnown RBP8.8□□□□□ -1
TDP1-210ENST00000554976 LSM12Q3MHD2 195 aaKnown RBP8.8□□□□□ -1
TDP1-210ENST00000554976 ACCSLQ4AC99 568 aa8.8□□□□□ -1
TDP1-210ENST00000554976 KHDC1Q4VXA5 237 aaKnown RBP8.8□□□□□ -1
TDP1-210ENST00000554976 CUZD1Q86UP6 607 aa8.8□□□□□ -1
TDP1-210ENST00000554976 PHYKPLQ8IUZ5 450 aa8.8□□□□□ -1
TDP1-210ENST00000554976 DRAXINQ8NBI3 349 aaPredicted RBP8.8□□□□□ -1
TDP1-210ENST00000554976 STAG3L4Q8TBR4 150 aa8.8□□□□□ -1
TDP1-210ENST00000554976 AGAP11Q8TF27 550 aa8.8□□□□□ -1
TDP1-210ENST00000554976 NAT14Q8WUY8 206 aa8.8□□□□□ -1
TDP1-210ENST00000554976 SREK1Q8WXA9 508 aaKnown RBP8.8□□□□□ -1
TDP1-210ENST00000554976 EZH1Q92800 747 aaPredicted RBP8.8□□□□□ -1
TDP1-210ENST00000554976 FAM136AQ96C01 138 aa8.8□□□□□ -1
TDP1-210ENST00000554976 LINGO1Q96FE5 620 aa8.8□□□□□ -1
TDP1-210ENST00000554976 CADM1Q9BY67 442 aaKnown RBP8.8□□□□□ -1
TDP1-210ENST00000554976 CYP4F12Q9HCS2 524 aa8.8□□□□□ -1
TDP1-210ENST00000554976 PCTPQ9UKL6 214 aa8.8□□□□□ -1
TDP1-210ENST00000554976 ADAMTS6Q9UKP5 1117 aa8.8□□□□□ -1
TDP1-210ENST00000554976 APOBEC2Q9Y235 224 aaKnown RBP8.8□□□□□ -1
TDP1-210ENST00000554976 RGSL1A5PLK6 1076 aa8.79□□□□□ -1
TDP1-210ENST00000554976 E2F3O00716 465 aa8.79□□□□□ -1
TDP1-210ENST00000554976 PPP6CO00743 305 aa8.79□□□□□ -1
TDP1-210ENST00000554976 TPBGLP0DKB5 382 aa8.79□□□□□ -1
TDP1-210ENST00000554976 ZNF7P17097 686 aaPredicted RBP8.79□□□□□ -1
TDP1-210ENST00000554976 PRDX6P30041 224 aa8.79□□□□□ -1
TDP1-210ENST00000554976 GJA4P35212 333 aa8.79□□□□□ -1
TDP1-210ENST00000554976 POLR2LP62875 67 aaKnown RBP8.79□□□□□ -1
TDP1-210ENST00000554976 ZNF234Q14588 700 aa8.79□□□□□ -1
TDP1-210ENST00000554976 CRY1Q16526 586 aa8.79□□□□□ -1
TDP1-210ENST00000554976 TAS2R42Q7RTR8 314 aa8.79□□□□□ -1
TDP1-210ENST00000554976 PTGR2Q8N8N7 351 aaPredicted RBP8.79□□□□□ -1
TDP1-210ENST00000554976 TERB1Q8NA31 727 aa8.79□□□□□ -1
TDP1-210ENST00000554976 PDPRQ8NCN5 879 aa8.79□□□□□ -1
TDP1-210ENST00000554976 ST13P5Q8NFI4 369 aaPredicted RBP8.79□□□□□ -1
TDP1-210ENST00000554976 FGF14Q92915 247 aa8.79□□□□□ -1
TDP1-210ENST00000554976 FAM131CQ96AQ9 280 aa8.79□□□□□ -1
TDP1-210ENST00000554976 ULK4Q96C45 1275 aa8.79□□□□□ -1
TDP1-210ENST00000554976 NSUN5Q96P11 429 aaKnown RBP8.79□□□□□ -1
TDP1-210ENST00000554976 C1orf21Q9H246 121 aa8.79□□□□□ -1
TDP1-210ENST00000554976 ZBTB26Q9HCK0 441 aa8.79□□□□□ -1
TDP1-210ENST00000554976 THAP10Q9P2Z0 257 aaPredicted RBP8.79□□□□□ -1
TDP1-210ENST00000554976 TRMT6Q9UJA5 497 aaKnown RBP8.79□□□□□ -1
TDP1-210ENST00000554976 TMCO1Q9UM00 188 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms