RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 STMND1H3BQB6 276 aa10.47□□□□□ -0.73
SHMT2-215ENST00000554656 TERTO14746 1132 aaKnown RBP10.47□□□□□ -0.73
SHMT2-215ENST00000554656 MATN3O15232 486 aa10.47□□□□□ -0.73
SHMT2-215ENST00000554656 TJP3O95049 919 aa10.47□□□□□ -0.73
SHMT2-215ENST00000554656 RHOXF2BP0C7M4 288 aa10.47□□□□□ -0.73
SHMT2-215ENST00000554656 ZNF30P17039 623 aa10.47□□□□□ -0.73
SHMT2-215ENST00000554656 KDELR1P24390 212 aa10.47□□□□□ -0.73
SHMT2-215ENST00000554656 NFKBIAP25963 317 aa10.47□□□□□ -0.73
SHMT2-215ENST00000554656 UGT1A3P35503 534 aa10.47□□□□□ -0.73
SHMT2-215ENST00000554656 CDKN2BP42772 138 aa10.47□□□□□ -0.73
SHMT2-215ENST00000554656 ITKQ08881 620 aa10.47□□□□□ -0.73
SHMT2-215ENST00000554656 TRA2AQ13595 282 aaKnown RBP eCLIP10.47□□□□□ -0.73
SHMT2-215ENST00000554656 CCNG2Q16589 344 aa10.47□□□□□ -0.73
SHMT2-215ENST00000554656 ANKRD20A8PQ5CZ79 823 aa10.47□□□□□ -0.73
SHMT2-215ENST00000554656 HENMT1Q5T8I9 393 aaKnown RBP10.47□□□□□ -0.73
SHMT2-215ENST00000554656 MFSD7Q6UXD7 560 aa10.47□□□□□ -0.73
SHMT2-215ENST00000554656 SYDE1Q6ZW31 735 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-215ENST00000554656 NLRP8Q86W28 1048 aa10.47□□□□□ -0.73
SHMT2-215ENST00000554656 GALNT13Q8IUC8 556 aa10.47□□□□□ -0.73
SHMT2-215ENST00000554656 LRRC49Q8IUZ0 686 aa10.47□□□□□ -0.73
SHMT2-215ENST00000554656 CCDC50Q8IVM0 306 aa10.47□□□□□ -0.73
SHMT2-215ENST00000554656 PRELID2Q8N945 189 aa10.47□□□□□ -0.73
SHMT2-215ENST00000554656 TTC13Q8NBP0 860 aa10.47□□□□□ -0.73
SHMT2-215ENST00000554656 LPCAT1Q8NF37 534 aa10.47□□□□□ -0.73
SHMT2-215ENST00000554656 FATE1Q969F0 183 aa10.47□□□□□ -0.73
SHMT2-215ENST00000554656 FAF2Q96CS3 445 aa10.47□□□□□ -0.73
SHMT2-215ENST00000554656 EID2BQ96D98 161 aa10.47□□□□□ -0.73
SHMT2-215ENST00000554656 LYSMD1Q96S90 227 aa10.47□□□□□ -0.73
SHMT2-215ENST00000554656 RHOXF2Q9BQY4 288 aa10.47□□□□□ -0.73
SHMT2-215ENST00000554656 LRRC1Q9BTT6 524 aa10.47□□□□□ -0.73
SHMT2-215ENST00000554656 BRD8Q9H0E9 1235 aa10.47□□□□□ -0.73
SHMT2-215ENST00000554656 CLMPQ9H6B4 373 aa10.47□□□□□ -0.73
SHMT2-215ENST00000554656 RBM22Q9NW64 420 aaKnown RBP eCLIP10.47□□□□□ -0.731e-9■■■■□ 20
SHMT2-215ENST00000554656 KCNK4Q9NYG8 393 aa10.47□□□□□ -0.73
SHMT2-215ENST00000554656 PDP2Q9P2J9 529 aa10.47□□□□□ -0.73
SHMT2-215ENST00000554656 TBC1D29Q9UFV1 150 aa10.47□□□□□ -0.73
SHMT2-215ENST00000554656 TTLL3Q9Y4R7 772 aa10.47□□□□□ -0.73
SHMT2-215ENST00000554656 LRRD1A4D1F6 860 aa10.46□□□□□ -0.73
SHMT2-215ENST00000554656 C3orf70A6NLC5 250 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-215ENST00000554656 WISP1O95388 367 aa10.46□□□□□ -0.73
SHMT2-215ENST00000554656 LIFP15018 202 aa10.46□□□□□ -0.73
SHMT2-215ENST00000554656 CCNCP24863 283 aa10.46□□□□□ -0.73
SHMT2-215ENST00000554656 COILP38432 576 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-215ENST00000554656 SPINT3P49223 89 aa10.46□□□□□ -0.73
SHMT2-215ENST00000554656 EPHB1P54762 984 aa10.46□□□□□ -0.73
SHMT2-215ENST00000554656 DRG2P55039 364 aaKnown RBP10.46□□□□□ -0.73
SHMT2-215ENST00000554656 TFDP2Q14188 446 aa10.46□□□□□ -0.73
SHMT2-215ENST00000554656 QPCTQ16769 361 aa10.46□□□□□ -0.73
SHMT2-215ENST00000554656 ZFYVE27Q5T4F4 411 aa10.46□□□□□ -0.73
SHMT2-215ENST00000554656 AADACL2Q6P093 401 aa10.46□□□□□ -0.73
SHMT2-215ENST00000554656 TMEM71Q6P5X7 295 aa10.46□□□□□ -0.73
SHMT2-215ENST00000554656 BBS12Q6ZW61 710 aa10.46□□□□□ -0.73
SHMT2-215ENST00000554656 MTERF4Q7Z6M4 381 aaKnown RBP10.46□□□□□ -0.73
SHMT2-215ENST00000554656 IFT20Q8IY31 132 aa10.46□□□□□ -0.73
SHMT2-215ENST00000554656 NRSN1Q8IZ57 195 aa10.46□□□□□ -0.73
SHMT2-215ENST00000554656 CNTD1Q8N815 330 aa10.46□□□□□ -0.73
SHMT2-215ENST00000554656 AGBL5Q8NDL9 886 aa10.46□□□□□ -0.73
SHMT2-215ENST00000554656 GRK7Q8WTQ7 553 aa10.46□□□□□ -0.73
SHMT2-215ENST00000554656 SEC14L1Q92503 715 aa10.46□□□□□ -0.73
SHMT2-215ENST00000554656 MAGOHBQ96A72 148 aaKnown RBP10.46□□□□□ -0.73
SHMT2-215ENST00000554656 ZNF670Q9BS34 389 aa10.46□□□□□ -0.73
SHMT2-215ENST00000554656 DDA1Q9BW61 102 aa10.46□□□□□ -0.73
SHMT2-215ENST00000554656 AP1M1Q9BXS5 423 aa10.46□□□□□ -0.73
SHMT2-215ENST00000554656 FAM129AQ9BZQ8 928 aa10.46□□□□□ -0.73
SHMT2-215ENST00000554656 SPRY4Q9C004 299 aa10.46□□□□□ -0.73
SHMT2-215ENST00000554656 DDX47Q9H0S4 455 aaKnown RBP10.46□□□□□ -0.73
SHMT2-215ENST00000554656 RAB17Q9H0T7 212 aa10.46□□□□□ -0.73
SHMT2-215ENST00000554656 PCDH9Q9HC56 1237 aa10.46□□□□□ -0.73
SHMT2-215ENST00000554656 DTLQ9NZJ0 730 aa10.46□□□□□ -0.73
SHMT2-215ENST00000554656 AKAP7Q9P0M2 348 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-215ENST00000554656 VPS18Q9P253 973 aa10.46□□□□□ -0.73
SHMT2-215ENST00000554656 DMGDHQ9UI17 866 aaKnown RBP10.46□□□□□ -0.73
SHMT2-215ENST00000554656 KCNK6Q9Y257 313 aa10.46□□□□□ -0.73
SHMT2-215ENST00000554656 PCDHB11Q9Y5F2 797 aa10.46□□□□□ -0.73
SHMT2-215ENST00000554656 NAV2Q8IVL1 2488 aa10.46□□□□□ -0.74
SHMT2-215ENST00000554656 COL12A1Q99715 3063 aa10.46□□□□□ -0.74
SHMT2-215ENST00000554656 C1orf232A0A0U1RR37 186 aa10.45□□□□□ -0.74
SHMT2-215ENST00000554656 EFCAB7A8K855 629 aa10.45□□□□□ -0.74
SHMT2-215ENST00000554656 B4E171 279 aa10.45□□□□□ -0.74
SHMT2-215ENST00000554656 SUV39H1O43463 412 aa10.45□□□□□ -0.74
SHMT2-215ENST00000554656 RAD51CO43502 376 aa10.45□□□□□ -0.74
SHMT2-215ENST00000554656 ATP8B1O43520 1251 aa10.45□□□□□ -0.74
SHMT2-215ENST00000554656 ASMTLO95671 621 aa10.45□□□□□ -0.74
SHMT2-215ENST00000554656 ACP5P13686 325 aa10.45□□□□□ -0.74
SHMT2-215ENST00000554656 TSPAN7P41732 249 aa10.45□□□□□ -0.74
SHMT2-215ENST00000554656 RPL26P61254 145 aaKnown RBP10.45□□□□□ -0.74
SHMT2-215ENST00000554656 GPLD1P80108 840 aa10.45□□□□□ -0.74
SHMT2-215ENST00000554656 HHEXQ03014 270 aa10.45□□□□□ -0.74
SHMT2-215ENST00000554656 ZBTB17Q13105 803 aa10.45□□□□□ -0.74
SHMT2-215ENST00000554656 NFATC2Q13469 925 aa10.45□□□□□ -0.74
SHMT2-215ENST00000554656 BIRC2Q13490 618 aa10.45□□□□□ -0.74
SHMT2-215ENST00000554656 CUL1Q13616 776 aa10.45□□□□□ -0.74
SHMT2-215ENST00000554656 LRP8Q14114 963 aa10.45□□□□□ -0.74
SHMT2-215ENST00000554656 SNAP47Q5SQN1 464 aa10.45□□□□□ -0.74
SHMT2-215ENST00000554656 ZNF648Q5T619 568 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-215ENST00000554656 TMEM164Q5U3C3 297 aa10.45□□□□□ -0.74
SHMT2-215ENST00000554656 ANKS6Q68DC2 871 aa10.45□□□□□ -0.74
SHMT2-215ENST00000554656 TIGD7Q6NT04 549 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-215ENST00000554656 IYDQ6PHW0 289 aa10.45□□□□□ -0.74
SHMT2-215ENST00000554656 FBXO38Q6PIJ6 1188 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms