RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 PDP2Q9P2J9 529 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 ZDHHC9Q9Y397 364 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 MTCL1Q9Y4B5 1905 aaKnown RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 OR51F1A6NGY5 319 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 ZNF878C9JN71 531 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 ONECUT3O60422 494 aaPredicted RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 FADS2O95864 444 aaKnown RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 MAGEA10P43363 369 aaPredicted RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 TCTAP57738 103 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 C11orf63Q6NUN7 778 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 GPAT4Q86UL3 456 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 ZNF558Q96NG5 402 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 OR5M11Q96RB7 305 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 MND1Q9BWT6 205 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 KLHL4Q9C0H6 718 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 LIN28AQ9H9Z2 209 aaKnown RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 GCM1Q9NP62 436 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 HPF1Q9NWY4 346 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 IP6K2Q9UHH9 426 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 BACE2Q9Y5Z0 518 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 RPS6KL1Q9Y6S9 549 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 NPEPPSL1A6NEC2 478 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 RNF225M0QZC1 329 aaPredicted RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 CDC123O75794 336 aaPredicted RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 ZIC2O95409 532 aaPredicted RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 F9P00740 461 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 ASGR1P07306 291 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 PSMA4P25789 261 aaKnown RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 BCL6P41182 706 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 SEMA5AQ13591 1074 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 PRRT3Q5FWE3 981 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 MAGEF1Q9HAY2 307 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 PRMT7Q9NVM4 692 aaPredicted RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 KCNK6Q9Y257 313 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 ZGRF1Q86YA3 2104 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 ABCC12Q96J65 1359 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 FAM220BPB1ANY3 271 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 SOCS7O14512 581 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 ALPIP09923 528 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 TUSC3Q13454 348 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 WLSQ5T9L3 541 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 C19orf48Q6RUI8 117 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 SNX32Q86XE0 403 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 FAM185AQ8N0U4 392 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 SCML4Q8N228 414 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 GSTCDQ8NEC7 633 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 LRFN5Q96NI6 719 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 NT5C1AQ9BXI3 368 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 DNMBPQ6XZF7 1577 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 A0A0G2JPF8 293 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 ZNF705FA8MVS1 300 aaPredicted RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 HNRNPCL3B7ZW38 293 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 H3BQF6 201 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 LGALS8O00214 317 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 MAGEB3O15480 346 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 CLEC3BP05452 202 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 ZNF705DP0CH99 300 aaPredicted RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 ZNF705BP0CI00 300 aaPredicted RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 HNRNPCL4P0DMR1 293 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 OR1E1P30953 314 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 CCZ1BP86790 482 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 CCZ1P86791 482 aaPredicted RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 PPP3CAQ08209 521 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 PDIA5Q14554 519 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 PDPK2PQ6A1A2 396 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 TMEM156Q8N614 296 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 SLC22A17Q8WUG5 538 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 TRAPPC9Q96Q05 1148 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 MAP3K14Q99558 947 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 B3GNT5Q9BYG0 378 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 DPH3P1Q9H4G8 78 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 RETREG1Q9H6L5 497 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 TREM1Q9NP99 234 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 PCDHGC5Q9Y5F6 944 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 LAD1O00515 517 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 MYL12BO14950 172 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 PRKNO60260 465 aaPredicted RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 XYLBO75191 536 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 TAS2R41P59536 307 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 MAPRE2Q15555 327 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 CYP2A13Q16696 494 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 RPS27LQ71UM5 84 aaKnown RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 SAMD3Q8N6K7 520 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 VAT1Q99536 393 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 VIPAS39Q9H9C1 493 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 OXSMQ9NWU1 459 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 GIMAP2Q9UG22 337 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 NOP16Q9Y3C1 178 aaKnown RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 PTCH2Q9Y6C5 1203 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 CFAP74Q9C0B2 1584 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 CYP1A1P04798 512 aaPredicted RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 STSP08842 583 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 CYP2A6P11509 494 aaPredicted RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 STARP49675 285 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 BCL2L1Q07817 233 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 CTBP1Q13363 440 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 C6orf183Q5T699 404 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 CLEC4GQ6UXB4 293 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 FBXO39Q8N4B4 442 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms