RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 ZCCHC2Q9C0B9 1178 aaKnown RBP7.43□□□□□ -1.22
LINC00640-201ENST00000554409 SYNDIG1Q9H7V2 258 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 BPIFA1Q9NP55 256 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 SARS2Q9NP81 518 aaKnown RBP7.43□□□□□ -1.22
LINC00640-201ENST00000554409 IL26Q9NPH9 171 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 SMOXQ9NWM0 555 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 TBC1D29Q9UFV1 150 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 R3HDM2Q9Y2K5 976 aaKnown RBP7.43□□□□□ -1.22
LINC00640-201ENST00000554409 PRKAB1Q9Y478 270 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 ARL5AQ9Y689 179 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 KIF26BQ2KJY2 2108 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 IGHV1OR21-1A0A087WYE8 117 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 KIR2DS5A0A0G2JLQ3 304 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 A0A0G2JNG1 304 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 C2orf81A6NN90 581 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 AGAP14A8MT82 685 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 KIR2DS3K7RE56 304 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 PLD2O14939 933 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 STX7O15400 261 aaKnown RBP7.42□□□□□ -1.22
LINC00640-201ENST00000554409 RRP8O43159 456 aaKnown RBP7.42□□□□□ -1.22
LINC00640-201ENST00000554409 PSMD3O43242 534 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 LIASO43766 372 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 NRDCO43847 1150 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 KCNJ13O60928 360 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 CDK14O94921 469 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 METTL18O95568 372 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 CRTAMO95727 393 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 EML2O95834 649 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 ITGA2BP08514 1039 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 ZNF7P17097 686 aaPredicted RBP7.42□□□□□ -1.22
LINC00640-201ENST00000554409 XRCC1P18887 633 aaPredicted RBP7.42□□□□□ -1.22
LINC00640-201ENST00000554409 CD1CP29017 333 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 RBMS1P29558 406 aaKnown RBP7.42□□□□□ -1.22
LINC00640-201ENST00000554409 ZNF140P52738 457 aaPredicted RBP7.42□□□□□ -1.22
LINC00640-201ENST00000554409 EPHA4P54764 986 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 OR1D5P58170 312 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 GPLD1P80108 840 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 HHEXQ03014 270 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 DMPKQ09013 629 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 TMEM115Q12893 351 aaPredicted RBP7.42□□□□□ -1.22
LINC00640-201ENST00000554409 OLIG2Q13516 323 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 TRA2AQ13595 282 aaKnown RBP eCLIP7.42□□□□□ -1.22
LINC00640-201ENST00000554409 KIR2DS5Q14953 304 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 OASLQ15646 514 aaKnown RBP7.42□□□□□ -1.22
LINC00640-201ENST00000554409 CHRNA6Q15825 494 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 MAP9Q49MG5 647 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 KHDC1Q4VXA5 237 aaKnown RBP7.42□□□□□ -1.22
LINC00640-201ENST00000554409 LDLRAP1Q5SW96 308 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 ZNF648Q5T619 568 aaPredicted RBP7.42□□□□□ -1.22
LINC00640-201ENST00000554409 CRTC3Q6UUV7 619 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 FAM151BQ6UXP7 276 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 WASH2PQ6VEQ5 465 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 LRRC69Q6ZNQ3 347 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 TMPRSS9Q7Z410 1059 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 C11orf96Q7Z7L8 435 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 SLC9B2Q86UD5 537 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 PIM3Q86V86 326 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 SLC13A5Q86YT5 568 aaPredicted RBP7.42□□□□□ -1.22
LINC00640-201ENST00000554409 ZNF547Q8IVP9 402 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 ZNF248Q8NDW4 579 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 TRIM58Q8NG06 486 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 OR4K2Q8NGD2 314 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 SH3KBP1Q96B97 665 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 DPYSL5Q9BPU6 564 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 TMEM121Q9BTD3 319 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 STN1Q9H668 368 aaKnown RBP7.42□□□□□ -1.22
LINC00640-201ENST00000554409 LRRC40Q9H9A6 602 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 EPB41L5Q9HCM4 733 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 ARFGAP3Q9NP61 516 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 LZTFL1Q9NQ48 299 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 WASH6PQ9NQA3 447 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 THSD1Q9NS62 852 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 ATXN7L1Q9ULK2 861 aaPredicted RBP7.42□□□□□ -1.22
LINC00640-201ENST00000554409 KCNK6Q9Y257 313 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 PCDHGA7Q9Y5G6 932 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 DNMT3AQ9Y6K1 912 aaPredicted RBP7.42□□□□□ -1.22
LINC00640-201ENST00000554409 APC2O95996 2303 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 WDFY3Q8IZQ1 3526 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 PKD1L2Q7Z442 2459 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 UNC13CQ8NB66 2214 aa7.42□□□□□ -1.22
LINC00640-201ENST00000554409 PMS2P1A4D2B8 440 aa7.41□□□□□ -1.22
LINC00640-201ENST00000554409 KLHL33A6NCF5 533 aa7.41□□□□□ -1.22
LINC00640-201ENST00000554409 LILRA5A6NI73 299 aa7.41□□□□□ -1.22
LINC00640-201ENST00000554409 ERI2A8K979 691 aaKnown RBP7.41□□□□□ -1.22
LINC00640-201ENST00000554409 H7C0S8 307 aa7.41□□□□□ -1.22
LINC00640-201ENST00000554409 HGSO14964 777 aaPredicted RBP7.41□□□□□ -1.22
LINC00640-201ENST00000554409 GPR39O43194 453 aa7.41□□□□□ -1.22
LINC00640-201ENST00000554409 LDB2O43679 373 aa7.41□□□□□ -1.22
LINC00640-201ENST00000554409 BUD23O43709 281 aaKnown RBP7.41□□□□□ -1.22
LINC00640-201ENST00000554409 DUX1O43812 170 aa7.41□□□□□ -1.22
LINC00640-201ENST00000554409 MTX2O75431 263 aa7.41□□□□□ -1.22
LINC00640-201ENST00000554409 SRP72O76094 671 aaKnown RBP7.41□□□□□ -1.22
LINC00640-201ENST00000554409 PRAMEF1O95521 474 aa7.41□□□□□ -1.22
LINC00640-201ENST00000554409 AP2A1O95782 977 aa7.41□□□□□ -1.22
LINC00640-201ENST00000554409 PSMA3P25788 255 aa7.41□□□□□ -1.22
LINC00640-201ENST00000554409 ALDH4A1P30038 563 aa7.41□□□□□ -1.22
LINC00640-201ENST00000554409 CA5AP35218 305 aa7.41□□□□□ -1.22
LINC00640-201ENST00000554409 UGT1A5P35504 534 aa7.41□□□□□ -1.22
LINC00640-201ENST00000554409 HADHAP40939 763 aa7.41□□□□□ -1.22
LINC00640-201ENST00000554409 ABCG1P45844 678 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms