RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 LRRC40Q9H9A6 602 aa12.9□□□□□ -0.34
SHMT2-211ENST00000554310 ARNT2Q9HBZ2 717 aa12.9□□□□□ -0.34
SHMT2-211ENST00000554310 KCNK6Q9Y257 313 aa12.9□□□□□ -0.34
SHMT2-211ENST00000554310 PRKAB1Q9Y478 270 aa12.9□□□□□ -0.34
SHMT2-211ENST00000554310 PCDHGA8Q9Y5G5 932 aa12.9□□□□□ -0.34
SHMT2-211ENST00000554310 A0A087WV48 116 aa12.89□□□□□ -0.35
SHMT2-211ENST00000554310 A6NCN8 305 aa12.89□□□□□ -0.35
SHMT2-211ENST00000554310 KMOO15229 486 aa12.89□□□□□ -0.35
SHMT2-211ENST00000554310 ZNF185O15231 689 aa12.89□□□□□ -0.35
SHMT2-211ENST00000554310 CASC3O15234 703 aaKnown RBP12.89□□□□□ -0.35
SHMT2-211ENST00000554310 BUD23O43709 281 aaKnown RBP12.89□□□□□ -0.35
SHMT2-211ENST00000554310 LIASO43766 372 aa12.89□□□□□ -0.35
SHMT2-211ENST00000554310 MTX2O75431 263 aa12.89□□□□□ -0.35
SHMT2-211ENST00000554310 KRT37O76014 449 aa12.89□□□□□ -0.35
SHMT2-211ENST00000554310 PRAMEF1O95521 474 aa12.89□□□□□ -0.35
SHMT2-211ENST00000554310 CPNE6O95741 557 aa12.89□□□□□ -0.35
SHMT2-211ENST00000554310 F3P13726 295 aa12.89□□□□□ -0.35
SHMT2-211ENST00000554310 STIP1P31948 543 aaKnown RBP12.89□□□□□ -0.35
SHMT2-211ENST00000554310 INHBCP55103 352 aa12.89□□□□□ -0.35
SHMT2-211ENST00000554310 B4GALNT1Q00973 533 aa12.89□□□□□ -0.35
SHMT2-211ENST00000554310 GTF2H3Q13889 308 aa12.89□□□□□ -0.35
SHMT2-211ENST00000554310 OASLQ15646 514 aaKnown RBP12.89□□□□□ -0.35
SHMT2-211ENST00000554310 MAP9Q49MG5 647 aa12.89□□□□□ -0.35
SHMT2-211ENST00000554310 LDLRAP1Q5SW96 308 aa12.89□□□□□ -0.35
SHMT2-211ENST00000554310 ZNF648Q5T619 568 aaPredicted RBP12.89□□□□□ -0.35
SHMT2-211ENST00000554310 KCTD11Q693B1 232 aa12.89□□□□□ -0.35
SHMT2-211ENST00000554310 WDR93Q6P2C0 686 aa12.89□□□□□ -0.35
SHMT2-211ENST00000554310 CRTC3Q6UUV7 619 aa12.89□□□□□ -0.35
SHMT2-211ENST00000554310 MMGT1Q8N4V1 131 aa12.89□□□□□ -0.35
SHMT2-211ENST00000554310 NOA1Q8NC60 698 aaKnown RBP12.89□□□□□ -0.35
SHMT2-211ENST00000554310 DDHD1Q8NEL9 900 aa12.89□□□□□ -0.35
SHMT2-211ENST00000554310 WDR36Q8NI36 951 aaKnown RBP12.89□□□□□ -0.35
SHMT2-211ENST00000554310 GDAP1Q8TB36 358 aa12.89□□□□□ -0.35
SHMT2-211ENST00000554310 BRSK1Q8TDC3 778 aa12.89□□□□□ -0.35
SHMT2-211ENST00000554310 SLC37A2Q8TED4 501 aa12.89□□□□□ -0.35
SHMT2-211ENST00000554310 HNRNPLLQ8WVV9 542 aaKnown RBP12.89□□□□□ -0.35
SHMT2-211ENST00000554310 CAPZA3Q96KX2 299 aa12.89□□□□□ -0.35
SHMT2-211ENST00000554310 ARFGAP3Q9NP61 516 aa12.89□□□□□ -0.35
SHMT2-211ENST00000554310 TBC1D29Q9UFV1 150 aa12.89□□□□□ -0.35
SHMT2-211ENST00000554310 TMPRSS11EQ9UL52 423 aa12.89□□□□□ -0.35
SHMT2-211ENST00000554310 SATB2Q9UPW6 733 aa12.89□□□□□ -0.35
SHMT2-211ENST00000554310 ARL5AQ9Y689 179 aa12.89□□□□□ -0.35
SHMT2-211ENST00000554310 PTPRQQ9UMZ3 2332 aa12.89□□□□□ -0.35
SHMT2-211ENST00000554310 CELSR3Q9NYQ7 3312 aa12.88□□□□□ -0.35
SHMT2-211ENST00000554310 KIR2DS5A0A0G2JLQ3 304 aa12.88□□□□□ -0.35
SHMT2-211ENST00000554310 A0A0G2JNG1 304 aa12.88□□□□□ -0.35
SHMT2-211ENST00000554310 A0A1W2PNU3 283 aaPredicted RBP12.88□□□□□ -0.35
SHMT2-211ENST00000554310 OR5K4A6NMS3 321 aa12.88□□□□□ -0.35
SHMT2-211ENST00000554310 ERI2A8K979 691 aaKnown RBP12.88□□□□□ -0.35
SHMT2-211ENST00000554310 KIR2DS3K7RE56 304 aa12.88□□□□□ -0.35
SHMT2-211ENST00000554310 GAPDHSO14556 408 aaPredicted RBP12.88□□□□□ -0.35
SHMT2-211ENST00000554310 PSMD3O43242 534 aa12.88□□□□□ -0.35
SHMT2-211ENST00000554310 TLX3O43711 291 aaPredicted RBP12.88□□□□□ -0.35
SHMT2-211ENST00000554310 ERLIN1O75477 346 aa12.88□□□□□ -0.35
SHMT2-211ENST00000554310 CDK14O94921 469 aa12.88□□□□□ -0.35
SHMT2-211ENST00000554310 METTL18O95568 372 aa12.88□□□□□ -0.35
SHMT2-211ENST00000554310 AP2A1O95782 977 aa12.88□□□□□ -0.35
SHMT2-211ENST00000554310 ZNF7P17097 686 aaPredicted RBP12.88□□□□□ -0.35
SHMT2-211ENST00000554310 VCLP18206 1134 aa12.88□□□□□ -0.35
SHMT2-211ENST00000554310 MCM3P25205 808 aa12.88□□□□□ -0.35
SHMT2-211ENST00000554310 RBMS1P29558 406 aaKnown RBP12.88□□□□□ -0.35
SHMT2-211ENST00000554310 PAFAH1B1P43034 410 aa12.88□□□□□ -0.35
SHMT2-211ENST00000554310 ZNF140P52738 457 aaPredicted RBP12.88□□□□□ -0.35
SHMT2-211ENST00000554310 PCBP4P57723 403 aaKnown RBP12.88□□□□□ -0.35
SHMT2-211ENST00000554310 ERVPABLB-1P60509 514 aa12.88□□□□□ -0.35
SHMT2-211ENST00000554310 OLIG2Q13516 323 aa12.88□□□□□ -0.35
SHMT2-211ENST00000554310 KIR2DS5Q14953 304 aa12.88□□□□□ -0.35
SHMT2-211ENST00000554310 CHRNA6Q15825 494 aa12.88□□□□□ -0.35
SHMT2-211ENST00000554310 INSCQ1MX18 579 aa12.88□□□□□ -0.35
SHMT2-211ENST00000554310 KHDC1Q4VXA5 237 aaKnown RBP12.88□□□□□ -0.35
SHMT2-211ENST00000554310 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.88□□□□□ -0.35
SHMT2-211ENST00000554310 GPRC6AQ5T6X5 926 aa12.88□□□□□ -0.35
SHMT2-211ENST00000554310 DENND5AQ6IQ26 1287 aa12.88□□□□□ -0.35
SHMT2-211ENST00000554310 B3GNT8Q7Z7M8 397 aa12.88□□□□□ -0.35
SHMT2-211ENST00000554310 SLITRK4Q8IW52 837 aa12.88□□□□□ -0.35
SHMT2-211ENST00000554310 OR4K2Q8NGD2 314 aa12.88□□□□□ -0.35
SHMT2-211ENST00000554310 COG1Q8WTW3 980 aa12.88□□□□□ -0.35
SHMT2-211ENST00000554310 FGF11Q92914 225 aa12.88□□□□□ -0.35
SHMT2-211ENST00000554310 TMEM159Q96B96 161 aa12.88□□□□□ -0.35
SHMT2-211ENST00000554310 TTC25Q96NG3 672 aa12.88□□□□□ -0.35
SHMT2-211ENST00000554310 DPYSL5Q9BPU6 564 aa12.88□□□□□ -0.35
SHMT2-211ENST00000554310 EPB41L5Q9HCM4 733 aa12.88□□□□□ -0.35
SHMT2-211ENST00000554310 SARS2Q9NP81 518 aaKnown RBP12.88□□□□□ -0.35
SHMT2-211ENST00000554310 ASCL3Q9NQ33 180 aa12.88□□□□□ -0.35
SHMT2-211ENST00000554310 THSD1Q9NS62 852 aa12.88□□□□□ -0.35
SHMT2-211ENST00000554310 KLC4Q9NSK0 619 aa12.88□□□□□ -0.35
SHMT2-211ENST00000554310 ZNF446Q9NWS9 450 aa12.88□□□□□ -0.35
SHMT2-211ENST00000554310 FAM53CQ9NYF3 392 aa12.88□□□□□ -0.35
SHMT2-211ENST00000554310 LAMA5O15230 3695 aa12.88□□□□□ -0.35
SHMT2-211ENST00000554310 AHCTF1Q8WYP5 2266 aa12.87□□□□□ -0.35
SHMT2-211ENST00000554310 PRR19A6NJB7 356 aa12.87□□□□□ -0.35
SHMT2-211ENST00000554310 PPM1DO15297 605 aa12.87□□□□□ -0.35
SHMT2-211ENST00000554310 GPR39O43194 453 aa12.87□□□□□ -0.35
SHMT2-211ENST00000554310 SNX2O60749 519 aa12.87□□□□□ -0.35
SHMT2-211ENST00000554310 EML2O95834 649 aa12.87□□□□□ -0.35
SHMT2-211ENST00000554310 ITGA2BP08514 1039 aa12.87□□□□□ -0.35
SHMT2-211ENST00000554310 ALDH4A1P30038 563 aa12.87□□□□□ -0.35
SHMT2-211ENST00000554310 FDFT1P37268 417 aa12.87□□□□□ -0.35
SHMT2-211ENST00000554310 HADHAP40939 763 aa12.87□□□□□ -0.35
SHMT2-211ENST00000554310 EIF2S3P41091 472 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms