RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 ELMO2Q96JJ3 720 aa14.34□□□□□ -0.11
SHMT2-210ENST00000553950 TSNARE1Q96NA8 513 aa14.34□□□□□ -0.11
SHMT2-210ENST00000553950 PRRX2Q99811 253 aa14.34□□□□□ -0.11
SHMT2-210ENST00000553950 APOOQ9BUR5 198 aa14.34□□□□□ -0.11
SHMT2-210ENST00000553950 P2RY12Q9H244 342 aa14.34□□□□□ -0.11
SHMT2-210ENST00000553950 CENPHQ9H3R5 247 aa14.34□□□□□ -0.11
SHMT2-210ENST00000553950 MBNL1Q9NR56 388 aaKnown RBP14.34□□□□□ -0.11
SHMT2-210ENST00000553950 KLHL42Q9P2K6 505 aa14.34□□□□□ -0.11
SHMT2-210ENST00000553950 SUSD2Q9UGT4 822 aa14.34□□□□□ -0.11
SHMT2-210ENST00000553950 TBK1Q9UHD2 729 aa14.34□□□□□ -0.11
SHMT2-210ENST00000553950 MBD1Q9UIS9 605 aaPredicted RBP14.34□□□□□ -0.11
SHMT2-210ENST00000553950 CRYL1Q9Y2S2 319 aa14.34□□□□□ -0.11
SHMT2-210ENST00000553950 ACTL7BQ9Y614 415 aa14.34□□□□□ -0.11
SHMT2-210ENST00000553950 ZFC3H1O60293 1989 aaKnown RBP14.34□□□□□ -0.11
SHMT2-210ENST00000553950 VCANP13611 3396 aa14.33□□□□□ -0.11
SHMT2-210ENST00000553950 PRR5-ARHGAP8B1AHC4 643 aa14.33□□□□□ -0.12
SHMT2-210ENST00000553950 HMGB1P1B2RPK0 211 aaPredicted RBP14.33□□□□□ -0.12
SHMT2-210ENST00000553950 TRIM49D1C9J1S8 452 aa14.33□□□□□ -0.12
SHMT2-210ENST00000553950 K7ESM1 405 aa14.33□□□□□ -0.12
SHMT2-210ENST00000553950 RAD51BO15315 384 aa14.33□□□□□ -0.12
SHMT2-210ENST00000553950 SASH3O75995 380 aa14.33□□□□□ -0.12
SHMT2-210ENST00000553950 CDK14O94921 469 aa14.33□□□□□ -0.12
SHMT2-210ENST00000553950 HAUS5O94927 633 aa14.33□□□□□ -0.12
SHMT2-210ENST00000553950 PRSS56P0CW18 603 aa14.33□□□□□ -0.12
SHMT2-210ENST00000553950 CRABP2P29373 138 aa14.33□□□□□ -0.12
SHMT2-210ENST00000553950 HOXD12P35452 270 aa14.33□□□□□ -0.12
SHMT2-210ENST00000553950 SKIV2L2P42285 1042 aaKnown RBP14.33□□□□□ -0.12
SHMT2-210ENST00000553950 PRLHRP49683 370 aa14.33□□□□□ -0.12
SHMT2-210ENST00000553950 CDKN1CP49918 316 aaPredicted RBP14.33□□□□□ -0.12
SHMT2-210ENST00000553950 KPNA2P52292 529 aaKnown RBP14.33□□□□□ -0.12
SHMT2-210ENST00000553950 PFN3P60673 137 aa14.33□□□□□ -0.12
SHMT2-210ENST00000553950 RACK1P63244 317 aaKnown RBP14.33□□□□□ -0.12
SHMT2-210ENST00000553950 DMWDQ09019 674 aa14.33□□□□□ -0.12
SHMT2-210ENST00000553950 TMEM115Q12893 351 aaPredicted RBP14.33□□□□□ -0.12
SHMT2-210ENST00000553950 USP10Q14694 798 aaKnown RBP14.33□□□□□ -0.12
SHMT2-210ENST00000553950 ANGPT1Q15389 498 aa14.33□□□□□ -0.12
SHMT2-210ENST00000553950 MROH9Q5TGP6 573 aa14.33□□□□□ -0.12
SHMT2-210ENST00000553950 LYSMD4Q5XG99 296 aa14.33□□□□□ -0.12
SHMT2-210ENST00000553950 PMS2CLQ68D20 193 aa14.33□□□□□ -0.12
SHMT2-210ENST00000553950 CNSTQ6PJW8 725 aa14.33□□□□□ -0.12
SHMT2-210ENST00000553950 GCNT7Q6ZNI0 430 aa14.33□□□□□ -0.12
SHMT2-210ENST00000553950 TIFABQ6ZNK6 161 aa14.33□□□□□ -0.12
SHMT2-210ENST00000553950 MAML2Q8IZL2 1156 aaPredicted RBP14.33□□□□□ -0.12
SHMT2-210ENST00000553950 DCLK2Q8N568 766 aa14.33□□□□□ -0.12
SHMT2-210ENST00000553950 PLA2G15Q8NCC3 412 aa14.33□□□□□ -0.12
SHMT2-210ENST00000553950 ALKBH8Q96BT7 664 aaKnown RBP14.33□□□□□ -0.12
SHMT2-210ENST00000553950 ATXN7L3BQ96GX2 97 aa14.33□□□□□ -0.12
SHMT2-210ENST00000553950 WDR92Q96MX6 357 aa14.33□□□□□ -0.12
SHMT2-210ENST00000553950 SH3GL2Q99962 352 aa14.33□□□□□ -0.12
SHMT2-210ENST00000553950 MYOCQ99972 504 aa14.33□□□□□ -0.12
SHMT2-210ENST00000553950 TMBIM4Q9HC24 238 aa14.33□□□□□ -0.12
SHMT2-210ENST00000553950 FZD3Q9NPG1 666 aa14.33□□□□□ -0.12
SHMT2-210ENST00000553950 AASDHPPTQ9NRN7 309 aa14.33□□□□□ -0.12
SHMT2-210ENST00000553950 CTNNAL1Q9UBT7 734 aa14.33□□□□□ -0.12
SHMT2-210ENST00000553950 TRMT6Q9UJA5 497 aaKnown RBP14.33□□□□□ -0.12
SHMT2-210ENST00000553950 CNOT6Q9ULM6 557 aaKnown RBP14.33□□□□□ -0.12
SHMT2-210ENST00000553950 GPR34Q9UPC5 381 aa14.33□□□□□ -0.12
SHMT2-210ENST00000553950 A0A087X1B8 175 aa14.32□□□□□ -0.12
SHMT2-210ENST00000553950 EIF3FO00303 357 aaPredicted RBP14.32□□□□□ -0.12
SHMT2-210ENST00000553950 TNFRSF10CO14798 259 aa14.32□□□□□ -0.12
SHMT2-210ENST00000553950 GALR2O43603 387 aaPredicted RBP14.32□□□□□ -0.12
SHMT2-210ENST00000553950 PIAS1O75925 651 aa14.32□□□□□ -0.12
SHMT2-210ENST00000553950 FAM155BO75949 473 aa14.32□□□□□ -0.12
SHMT2-210ENST00000553950 ASMTLO95671 621 aa14.32□□□□□ -0.12
SHMT2-210ENST00000553950 MT-ND3P03897 115 aa14.32□□□□□ -0.12
SHMT2-210ENST00000553950 MPOP05164 745 aa14.32□□□□□ -0.12
SHMT2-210ENST00000553950 GNSP15586 552 aa14.32□□□□□ -0.12
SHMT2-210ENST00000553950 VCLP18206 1134 aa14.32□□□□□ -0.12
SHMT2-210ENST00000553950 BCKDHBP21953 392 aa14.32□□□□□ -0.12
SHMT2-210ENST00000553950 FDXRP22570 491 aa14.32□□□□□ -0.12
SHMT2-210ENST00000553950 GABRB3P28472 473 aa14.32□□□□□ -0.12
SHMT2-210ENST00000553950 FMO4P31512 558 aa14.32□□□□□ -0.12
SHMT2-210ENST00000553950 RAB10P61026 200 aa14.32□□□□□ -0.12
SHMT2-210ENST00000553950 PLOD1Q02809 727 aaPredicted RBP14.32□□□□□ -0.12
SHMT2-210ENST00000553950 PDAP1Q13442 181 aaKnown RBP14.32□□□□□ -0.12
SHMT2-210ENST00000553950 TEAD4Q15561 434 aa14.32□□□□□ -0.12
SHMT2-210ENST00000553950 ZKSCAN8Q15776 578 aaPredicted RBP14.32□□□□□ -0.12
SHMT2-210ENST00000553950 HECTD2Q5U5R9 776 aa14.32□□□□□ -0.12
SHMT2-210ENST00000553950 CEP68Q76N32 757 aa14.32□□□□□ -0.12
SHMT2-210ENST00000553950 LRRTM4Q86VH4 590 aa14.32□□□□□ -0.12
SHMT2-210ENST00000553950 TRAPPC5Q8IUR0 188 aa14.32□□□□□ -0.12
SHMT2-210ENST00000553950 MFSD2AQ8NA29 543 aa14.32□□□□□ -0.12
SHMT2-210ENST00000553950 DNASE2BQ8WZ79 361 aa14.32□□□□□ -0.12
SHMT2-210ENST00000553950 FUBP1Q96AE4 644 aaKnown RBP14.32□□□□□ -0.12
SHMT2-210ENST00000553950 BIRC8Q96P09 236 aa14.32□□□□□ -0.12
SHMT2-210ENST00000553950 SMC6Q96SB8 1091 aa14.32□□□□□ -0.12
SHMT2-210ENST00000553950 SYTL2Q9HCH5 934 aa14.32□□□□□ -0.12
SHMT2-210ENST00000553950 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.32□□□□□ -0.12
SHMT2-210ENST00000553950 TLK1Q9UKI8 766 aa14.32□□□□□ -0.12
SHMT2-210ENST00000553950 TMPRSS11EQ9UL52 423 aa14.32□□□□□ -0.12
SHMT2-210ENST00000553950 SLC39A10Q9ULF5 831 aa14.32□□□□□ -0.12
SHMT2-210ENST00000553950 VWA7Q9Y334 891 aa14.32□□□□□ -0.12
SHMT2-210ENST00000553950 OR1A2Q9Y585 309 aa14.32□□□□□ -0.12
SHMT2-210ENST00000553950 DNMT3AQ9Y6K1 912 aaPredicted RBP14.32□□□□□ -0.12
SHMT2-210ENST00000553950 ZNF318Q5VUA4 2279 aa14.32□□□□□ -0.12
SHMT2-210ENST00000553950 AGPSO00116 658 aa14.31□□□□□ -0.12
SHMT2-210ENST00000553950 OR1I1O60431 355 aa14.31□□□□□ -0.12
SHMT2-210ENST00000553950 KCNJ13O60928 360 aa14.31□□□□□ -0.12
SHMT2-210ENST00000553950 SP9P0CG40 484 aa14.31□□□□□ -0.12
SHMT2-210ENST00000553950 TYK2P29597 1187 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms