RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 GDAP2Q9NXN4 497 aa6.02□□□□□ -1.45
ATXN3-223ENST00000553686 FEZ2Q9UHY8 353 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-223ENST00000553686 CPSF3Q9UKF6 684 aaKnown RBP6.02□□□□□ -1.45
ATXN3-223ENST00000553686 ZDHHC8Q9ULC8 765 aa6.02□□□□□ -1.45
ATXN3-223ENST00000553686 FZD4Q9ULV1 537 aa6.02□□□□□ -1.45
ATXN3-223ENST00000553686 KCNJ14Q9UNX9 436 aa6.02□□□□□ -1.45
ATXN3-223ENST00000553686 AGAP1Q9UPQ3 857 aa6.02□□□□□ -1.45
ATXN3-223ENST00000553686 PTPRDP23468 1912 aa6.01□□□□□ -1.45
ATXN3-223ENST00000553686 TBC1D3DA0A087WVF3 549 aa6.01□□□□□ -1.45
ATXN3-223ENST00000553686 TBC1D3IA0A087WXS9 549 aa6.01□□□□□ -1.45
ATXN3-223ENST00000553686 TBC1D3EA0A087X179 549 aa6.01□□□□□ -1.45
ATXN3-223ENST00000553686 TBC1D3KA0A087X1G2 549 aa6.01□□□□□ -1.45
ATXN3-223ENST00000553686 A0A0B4J269 797 aa6.01□□□□□ -1.45
ATXN3-223ENST00000553686 TBC1D3FA6NER0 549 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-223ENST00000553686 EFCAB7A8K855 629 aa6.01□□□□□ -1.45
ATXN3-223ENST00000553686 TBC1D3LB9A6J9 549 aa6.01□□□□□ -1.45
ATXN3-223ENST00000553686 HNRNPDLO14979 420 aaKnown RBP6.01□□□□□ -1.45
ATXN3-223ENST00000553686 RNASEH2AO75792 299 aaKnown RBP6.01□□□□□ -1.45
ATXN3-223ENST00000553686 AHSGP02765 367 aa6.01□□□□□ -1.45
ATXN3-223ENST00000553686 ATP5BP06576 529 aaKnown RBP6.01□□□□□ -1.45
ATXN3-223ENST00000553686 TBC1D3HP0C7X1 549 aa6.01□□□□□ -1.45
ATXN3-223ENST00000553686 KCNJ12Q14500 433 aa6.01□□□□□ -1.45
ATXN3-223ENST00000553686 CDKN3Q16667 212 aa6.01□□□□□ -1.45
ATXN3-223ENST00000553686 KAZNQ674X7 775 aa6.01□□□□□ -1.45
ATXN3-223ENST00000553686 TBC1D3GQ6DHY5 549 aa6.01□□□□□ -1.45
ATXN3-223ENST00000553686 TBC1D3CQ6IPX1 549 aa6.01□□□□□ -1.45
ATXN3-223ENST00000553686 DPY19L2P1Q6NXN4 242 aa6.01□□□□□ -1.45
ATXN3-223ENST00000553686 FBXO42Q6P3S6 717 aa6.01□□□□□ -1.45
ATXN3-223ENST00000553686 EFL1Q7Z2Z2 1120 aaKnown RBP6.01□□□□□ -1.45
ATXN3-223ENST00000553686 TBC1D3Q8IZP1 549 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-223ENST00000553686 DAW1Q8N136 415 aa6.01□□□□□ -1.45
ATXN3-223ENST00000553686 LRRC52Q8N7C0 313 aa6.01□□□□□ -1.45
ATXN3-223ENST00000553686 WFIKKN2Q8TEU8 576 aa6.01□□□□□ -1.45
ATXN3-223ENST00000553686 APOBEC4Q8WW27 367 aaKnown RBP6.01□□□□□ -1.45
ATXN3-223ENST00000553686 JPH3Q8WXH2 748 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-223ENST00000553686 SORCS1Q8WY21 1168 aa6.01□□□□□ -1.45
ATXN3-223ENST00000553686 NAT6Q93015 286 aa6.01□□□□□ -1.45
ATXN3-223ENST00000553686 TMEM159Q96B96 161 aa6.01□□□□□ -1.45
ATXN3-223ENST00000553686 SIK2Q9H0K1 926 aa6.01□□□□□ -1.45
ATXN3-223ENST00000553686 MRPS18AQ9NVS2 196 aaKnown RBP6.01□□□□□ -1.45
ATXN3-223ENST00000553686 SEL1LQ9UBV2 794 aa6.01□□□□□ -1.45
ATXN3-223ENST00000553686 ZNF180Q9UJW8 692 aa6.01□□□□□ -1.45
ATXN3-223ENST00000553686 ITGB1BP2Q9UKP3 347 aa6.01□□□□□ -1.45
ATXN3-223ENST00000553686 SNX9Q9Y5X1 595 aa6.01□□□□□ -1.45
ATXN3-223ENST00000553686 CSMD1Q96PZ7 3565 aa6.01□□□□□ -1.45
ATXN3-223ENST00000553686 HIVEP1P15822 2718 aa6.01□□□□□ -1.45
ATXN3-223ENST00000553686 UBE4BO95155 1302 aa6□□□□□ -1.45
ATXN3-223ENST00000553686 HEATR9A2RTY3 570 aa6□□□□□ -1.45
ATXN3-223ENST00000553686 PRAMEF26H0Y7S4 382 aa6□□□□□ -1.45
ATXN3-223ENST00000553686 MPPED1O15442 326 aa6□□□□□ -1.45
ATXN3-223ENST00000553686 PROM1O43490 865 aa6□□□□□ -1.45
ATXN3-223ENST00000553686 LATO43561 262 aa6□□□□□ -1.45
ATXN3-223ENST00000553686 AKAP10O43572 662 aa6□□□□□ -1.45
ATXN3-223ENST00000553686 AP1G1O43747 822 aa6□□□□□ -1.45
ATXN3-223ENST00000553686 FAM189A1O60320 539 aa6□□□□□ -1.45
ATXN3-223ENST00000553686 TLR5O60602 858 aa6□□□□□ -1.45
ATXN3-223ENST00000553686 DIAPH2O60879 1101 aa6□□□□□ -1.45
ATXN3-223ENST00000553686 ATP2C2O75185 946 aa6□□□□□ -1.45
ATXN3-223ENST00000553686 PIAS2O75928 621 aa6□□□□□ -1.45
ATXN3-223ENST00000553686 CNTN5O94779 1100 aa6□□□□□ -1.45
ATXN3-223ENST00000553686 KIF20AO95235 890 aa6□□□□□ -1.45
ATXN3-223ENST00000553686 IL18RAPO95256 599 aa6□□□□□ -1.45
ATXN3-223ENST00000553686 RNF224P0DH78 156 aa6□□□□□ -1.45
ATXN3-223ENST00000553686 GOT1P17174 413 aa6□□□□□ -1.45
ATXN3-223ENST00000553686 WT1P19544 449 aaPredicted RBP6□□□□□ -1.45
ATXN3-223ENST00000553686 PDIA3P30101 505 aaKnown RBP6□□□□□ -1.45
ATXN3-223ENST00000553686 CCT6AP40227 531 aaKnown RBP6□□□□□ -1.45
ATXN3-223ENST00000553686 HNRNPKP61978 463 aaKnown RBP eCLIP6□□□□□ -1.45
ATXN3-223ENST00000553686 NKX6-1P78426 367 aaPredicted RBP6□□□□□ -1.45
ATXN3-223ENST00000553686 FGL2Q14314 439 aa6□□□□□ -1.45
ATXN3-223ENST00000553686 ZFAND4Q86XD8 727 aa6□□□□□ -1.45
ATXN3-223ENST00000553686 FBXL16Q8N461 479 aa6□□□□□ -1.45
ATXN3-223ENST00000553686 CSGALNACT2Q8N6G5 542 aa6□□□□□ -1.45
ATXN3-223ENST00000553686 OR6B3Q8NGW1 331 aa6□□□□□ -1.45
ATXN3-223ENST00000553686 MYCBPAPQ8TBZ2 947 aa6□□□□□ -1.45
ATXN3-223ENST00000553686 WBP2Q969T9 261 aa6□□□□□ -1.45
ATXN3-223ENST00000553686 C1GALT1C1Q96EU7 318 aa6□□□□□ -1.45
ATXN3-223ENST00000553686 PCED1BQ96HM7 432 aa6□□□□□ -1.45
ATXN3-223ENST00000553686 CDK5RAP3Q96JB5 506 aa6□□□□□ -1.45
ATXN3-223ENST00000553686 CNPPD1Q9BV87 410 aa6□□□□□ -1.45
ATXN3-223ENST00000553686 DCLK3Q9C098 648 aa6□□□□□ -1.45
ATXN3-223ENST00000553686 B3GNT4Q9C0J1 378 aa6□□□□□ -1.45
ATXN3-223ENST00000553686 ELOVL4Q9GZR5 314 aa6□□□□□ -1.45
ATXN3-223ENST00000553686 RSPH9Q9H1X1 276 aaPredicted RBP6□□□□□ -1.45
ATXN3-223ENST00000553686 EPB41L5Q9HCM4 733 aa6□□□□□ -1.45
ATXN3-223ENST00000553686 TLR8Q9NR97 1041 aaKnown RBP6□□□□□ -1.45
ATXN3-223ENST00000553686 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6□□□□□ -1.45
ATXN3-223ENST00000553686 ETAA1Q9NY74 926 aa6□□□□□ -1.45
ATXN3-223ENST00000553686 LARSQ9P2J5 1176 aaKnown RBP6□□□□□ -1.45
ATXN3-223ENST00000553686 PISDQ9UG56 409 aa6□□□□□ -1.45
ATXN3-223ENST00000553686 PNMA8BQ9ULN7 279 aaPredicted RBP6□□□□□ -1.45
ATXN3-223ENST00000553686 ENTPD4Q9Y227 616 aa6□□□□□ -1.45
ATXN3-223ENST00000553686 CSNK1G3Q9Y6M4 447 aa6□□□□□ -1.45
ATXN3-223ENST00000553686 LY6G6EA0A0G2JKS1 128 aa5.99□□□□□ -1.45
ATXN3-223ENST00000553686 MKRN2OSH3BPM6 223 aa5.99□□□□□ -1.45
ATXN3-223ENST00000553686 FAM155BO75949 473 aa5.99□□□□□ -1.45
ATXN3-223ENST00000553686 LDLRP01130 860 aa5.99□□□□□ -1.45
ATXN3-223ENST00000553686 PIGRP01833 764 aa5.99□□□□□ -1.45
ATXN3-223ENST00000553686 DLDP09622 509 aaKnown RBP5.99□□□□□ -1.45
ATXN3-223ENST00000553686 FAM163BP0C2L3 166 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms