RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 C1QL1O75973 258 aa17.96■□□□□ 0.47
SHMT2-206ENST00000553529 IPO7O95373 1038 aaKnown RBP17.96■□□□□ 0.47
SHMT2-206ENST00000553529 METTL18O95568 372 aa17.96■□□□□ 0.47
SHMT2-206ENST00000553529 THRAP10827 490 aa17.96■□□□□ 0.47
SHMT2-206ENST00000553529 F3P13726 295 aa17.96■□□□□ 0.47
SHMT2-206ENST00000553529 PBLDP30039 288 aaPredicted RBP17.96■□□□□ 0.47
SHMT2-206ENST00000553529 PTPN7P35236 360 aa17.96■□□□□ 0.47
SHMT2-206ENST00000553529 HMGCLP35914 325 aa17.96■□□□□ 0.47
SHMT2-206ENST00000553529 FASLGP48023 281 aa17.96■□□□□ 0.47
SHMT2-206ENST00000553529 PPM1FP49593 454 aaPredicted RBP17.96■□□□□ 0.47
SHMT2-206ENST00000553529 GFERP55789 205 aa17.96■□□□□ 0.47
SHMT2-206ENST00000553529 COPS2P61201 443 aa17.96■□□□□ 0.47
SHMT2-206ENST00000553529 DENND5AQ6IQ26 1287 aa17.96■□□□□ 0.47
SHMT2-206ENST00000553529 CCDC70Q6NSX1 233 aa17.96■□□□□ 0.47
SHMT2-206ENST00000553529 XKR5Q6UX68 686 aa17.96■□□□□ 0.47
SHMT2-206ENST00000553529 PHYKPLQ8IUZ5 450 aa17.96■□□□□ 0.47
SHMT2-206ENST00000553529 GDAP1Q8TB36 358 aa17.96■□□□□ 0.47
SHMT2-206ENST00000553529 GRAMD1AQ96CP6 724 aa17.96■□□□□ 0.47
SHMT2-206ENST00000553529 FSD1LQ9BXM9 530 aa17.96■□□□□ 0.47
SHMT2-206ENST00000553529 ZMYND15Q9H091 742 aa17.96■□□□□ 0.47
SHMT2-206ENST00000553529 OGFRQ9NZT2 677 aa17.96■□□□□ 0.47
SHMT2-206ENST00000553529 FKBPLQ9UIM3 349 aa17.96■□□□□ 0.47
SHMT2-206ENST00000553529 AMFRQ9UKV5 643 aa17.96■□□□□ 0.47
SHMT2-206ENST00000553529 SLC30A1Q9Y6M5 507 aa17.96■□□□□ 0.47
SHMT2-206ENST00000553529 IGSF10Q6WRI0 2623 aa17.96■□□□□ 0.47
SHMT2-206ENST00000553529 CCDC78A2IDD5 438 aa17.95■□□□□ 0.46
SHMT2-206ENST00000553529 MTSS1O43312 755 aa17.95■□□□□ 0.46
SHMT2-206ENST00000553529 CDK14O94921 469 aa17.95■□□□□ 0.46
SHMT2-206ENST00000553529 ZNF7P17097 686 aaPredicted RBP17.95■□□□□ 0.46
SHMT2-206ENST00000553529 CDC25BP30305 580 aa17.95■□□□□ 0.46
SHMT2-206ENST00000553529 SPAM1P38567 509 aa17.95■□□□□ 0.46
SHMT2-206ENST00000553529 SLC19A1P41440 591 aa17.95■□□□□ 0.46
SHMT2-206ENST00000553529 LIMK2P53671 638 aa17.95■□□□□ 0.46
SHMT2-206ENST00000553529 UBE2IP63279 158 aaKnown RBP17.95■□□□□ 0.46
SHMT2-206ENST00000553529 KLF1Q13351 362 aaPredicted RBP17.95■□□□□ 0.46
SHMT2-206ENST00000553529 CLCA4Q14CN2 919 aa17.95■□□□□ 0.46
SHMT2-206ENST00000553529 GPRC6AQ5T6X5 926 aa17.95■□□□□ 0.46
SHMT2-206ENST00000553529 TRAPPC5Q8IUR0 188 aa17.95■□□□□ 0.46
SHMT2-206ENST00000553529 CDKL3Q8IVW4 592 aaPredicted RBP17.95■□□□□ 0.46
SHMT2-206ENST00000553529 RAVER1Q8IY67 606 aaKnown RBP17.95■□□□□ 0.46
SHMT2-206ENST00000553529 FAM71DQ8N9W8 422 aa17.95■□□□□ 0.46
SHMT2-206ENST00000553529 OR4K2Q8NGD2 314 aa17.95■□□□□ 0.46
SHMT2-206ENST00000553529 VAT1Q99536 393 aa17.95■□□□□ 0.46
SHMT2-206ENST00000553529 CTRCQ99895 268 aa17.95■□□□□ 0.46
SHMT2-206ENST00000553529 SEMA4CQ9C0C4 833 aa17.95■□□□□ 0.46
SHMT2-206ENST00000553529 CPNE7Q9UBL6 633 aa17.95■□□□□ 0.46
SHMT2-206ENST00000553529 FAM8A1Q9UBU6 413 aa17.95■□□□□ 0.46
SHMT2-206ENST00000553529 TRHDEQ9UKU6 1024 aa17.95■□□□□ 0.46
SHMT2-206ENST00000553529 SSUH2Q9Y2M2 353 aa17.95■□□□□ 0.46
SHMT2-206ENST00000553529 SDK2Q58EX2 2172 aa17.95■□□□□ 0.46
SHMT2-206ENST00000553529 GLYATL1P3A0A0U1RQE8 302 aa17.94■□□□□ 0.46
SHMT2-206ENST00000553529 TYRP1P17643 537 aa17.94■□□□□ 0.46
SHMT2-206ENST00000553529 TPH1P17752 444 aa17.94■□□□□ 0.46
SHMT2-206ENST00000553529 HLA-DPA1P20036 260 aa17.94■□□□□ 0.46
SHMT2-206ENST00000553529 CDKN1CP49918 316 aaPredicted RBP17.94■□□□□ 0.46
SHMT2-206ENST00000553529 PPP1CAP62136 330 aa17.94■□□□□ 0.46
SHMT2-206ENST00000553529 TMEM115Q12893 351 aaPredicted RBP17.94■□□□□ 0.46
SHMT2-206ENST00000553529 DUS1LQ6P1R4 473 aaKnown RBP17.94■□□□□ 0.46
SHMT2-206ENST00000553529 RANBP10Q6VN20 620 aa17.94■□□□□ 0.46
SHMT2-206ENST00000553529 GPR155Q7Z3F1 870 aa17.94■□□□□ 0.46
SHMT2-206ENST00000553529 LRRTM4Q86VH4 590 aa17.94■□□□□ 0.46
SHMT2-206ENST00000553529 LILRA3Q8N6C8 439 aaPredicted RBP17.94■□□□□ 0.46
SHMT2-206ENST00000553529 GPR150Q8NGU9 434 aa17.94■□□□□ 0.46
SHMT2-206ENST00000553529 NCSTNQ92542 709 aa17.94■□□□□ 0.46
SHMT2-206ENST00000553529 SPATA13Q96N96 652 aa17.94■□□□□ 0.46
SHMT2-206ENST00000553529 VPS35Q96QK1 796 aa17.94■□□□□ 0.46
SHMT2-206ENST00000553529 NRTNQ99748 197 aa17.94■□□□□ 0.46
SHMT2-206ENST00000553529 TMEM121Q9BTD3 319 aa17.94■□□□□ 0.46
SHMT2-206ENST00000553529 RMI1Q9H9A7 625 aa17.94■□□□□ 0.46
SHMT2-206ENST00000553529 APMAPQ9HDC9 416 aa17.94■□□□□ 0.46
SHMT2-206ENST00000553529 PSMD13Q9UNM6 376 aa17.94■□□□□ 0.46
SHMT2-206ENST00000553529 MGAQ8IWI9 3026 aa17.94■□□□□ 0.46
SHMT2-206ENST00000553529 EFCAB7A8K855 629 aa17.93■□□□□ 0.46
SHMT2-206ENST00000553529 PDZK1P1A8MUH7 402 aa17.93■□□□□ 0.46
SHMT2-206ENST00000553529 EPOP01588 193 aa17.93■□□□□ 0.46
SHMT2-206ENST00000553529 GPR3P46089 330 aa17.93■□□□□ 0.46
SHMT2-206ENST00000553529 GEMP55040 296 aa17.93■□□□□ 0.46
SHMT2-206ENST00000553529 KIF5AQ12840 1032 aa17.93■□□□□ 0.46
SHMT2-206ENST00000553529 EIF3IQ13347 325 aaKnown RBP17.93■□□□□ 0.46
SHMT2-206ENST00000553529 NFE2L1Q14494 772 aa17.93■□□□□ 0.46
SHMT2-206ENST00000553529 OR4D9Q8NGE8 314 aa17.93■□□□□ 0.46
SHMT2-206ENST00000553529 ART4Q93070 314 aa17.93■□□□□ 0.46
SHMT2-206ENST00000553529 HES6Q96HZ4 224 aa17.93■□□□□ 0.46
SHMT2-206ENST00000553529 CMKLR1Q99788 373 aa17.93■□□□□ 0.46
SHMT2-206ENST00000553529 SARS2Q9NP81 518 aaKnown RBP17.93■□□□□ 0.46
SHMT2-206ENST00000553529 GUCA1BQ9UMX6 200 aa17.93■□□□□ 0.46
SHMT2-206ENST00000553529 B3GALT1Q9Y5Z6 326 aa17.93■□□□□ 0.46
SHMT2-206ENST00000553529 CFAP20Q9Y6A4 193 aaKnown RBP17.93■□□□□ 0.46
SHMT2-206ENST00000553529 SGTAO43765 313 aa17.92■□□□□ 0.46
SHMT2-206ENST00000553529 TJP3O95049 919 aa17.92■□□□□ 0.46
SHMT2-206ENST00000553529 PRAMEF1O95521 474 aa17.92■□□□□ 0.46
SHMT2-206ENST00000553529 ETS1P14921 441 aa17.92■□□□□ 0.46
SHMT2-206ENST00000553529 LEPRP48357 1165 aaKnown RBP17.92■□□□□ 0.46
SHMT2-206ENST00000553529 TMPRSS3P57727 454 aa17.92■□□□□ 0.46
SHMT2-206ENST00000553529 CYP4F2P78329 520 aa17.92■□□□□ 0.46
SHMT2-206ENST00000553529 XIAPP98170 497 aa17.92■□□□□ 0.46
SHMT2-206ENST00000553529 PEX6Q13608 980 aa17.92■□□□□ 0.46
SHMT2-206ENST00000553529 ANKS6Q68DC2 871 aa17.92■□□□□ 0.46
SHMT2-206ENST00000553529 ITPRIPL1Q6GPH6 555 aa17.92■□□□□ 0.46
SHMT2-206ENST00000553529 FAM129CQ86XR2 697 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms