RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 RBM15BQ8NDT2 890 aaKnown RBP5.08□□□□□ -1.6
SYNE2-210ENST00000553455 MCUQ8NE86 351 aa5.08□□□□□ -1.6
SYNE2-210ENST00000553455 TAS1R2Q8TE23 839 aa5.08□□□□□ -1.6
SYNE2-210ENST00000553455 MIB2Q96AX9 1013 aa5.08□□□□□ -1.6
SYNE2-210ENST00000553455 PTERQ96BW5 349 aa5.08□□□□□ -1.6
SYNE2-210ENST00000553455 SCMH1Q96GD3 660 aa5.08□□□□□ -1.6
SYNE2-210ENST00000553455 SLC22A12Q96S37 553 aa5.08□□□□□ -1.6
SYNE2-210ENST00000553455 RAD21L1Q9H4I0 556 aa5.08□□□□□ -1.6
SYNE2-210ENST00000553455 ZCCHC17Q9NP64 241 aaKnown RBP5.08□□□□□ -1.6
SYNE2-210ENST00000553455 AMACRQ9UHK6 382 aa5.08□□□□□ -1.6
SYNE2-210ENST00000553455 SNX9Q9Y5X1 595 aa5.08□□□□□ -1.6
SYNE2-210ENST00000553455 TAF1P21675 1872 aa5.07□□□□□ -1.6
SYNE2-210ENST00000553455 TCRBV21S2A2A0A5A6 115 aa5.07□□□□□ -1.6
SYNE2-210ENST00000553455 TRBC2A0A5B9 178 aa5.07□□□□□ -1.6
SYNE2-210ENST00000553455 SRRM3A6NNA2 597 aaPredicted RBP5.07□□□□□ -1.6
SYNE2-210ENST00000553455 J3QR06 171 aa5.07□□□□□ -1.6
SYNE2-210ENST00000553455 MID1O15344 667 aa5.07□□□□□ -1.6
SYNE2-210ENST00000553455 KDM4BO94953 1096 aa5.07□□□□□ -1.6
SYNE2-210ENST00000553455 CLDN14O95500 239 aa5.07□□□□□ -1.6
SYNE2-210ENST00000553455 C22orf31O95567 290 aa5.07□□□□□ -1.6
SYNE2-210ENST00000553455 S1PR1P21453 382 aa5.07□□□□□ -1.6
SYNE2-210ENST00000553455 KCNA5P22460 613 aa5.07□□□□□ -1.6
SYNE2-210ENST00000553455 CPT2P23786 658 aa5.07□□□□□ -1.6
SYNE2-210ENST00000553455 NR2F2P24468 414 aa5.07□□□□□ -1.6
SYNE2-210ENST00000553455 CORO1AP31146 461 aaKnown RBP5.07□□□□□ -1.6
SYNE2-210ENST00000553455 LINC00205P59089 165 aa5.07□□□□□ -1.6
SYNE2-210ENST00000553455 PLCB4Q15147 1175 aa5.07□□□□□ -1.6
SYNE2-210ENST00000553455 CRY2Q49AN0 593 aa5.07□□□□□ -1.6
SYNE2-210ENST00000553455 RAB6CQ53S08 254 aa5.07□□□□□ -1.6
SYNE2-210ENST00000553455 SPECC1Q5M775 1068 aa5.07□□□□□ -1.6
SYNE2-210ENST00000553455 TMEM211Q6ICI0 200 aa5.07□□□□□ -1.6
SYNE2-210ENST00000553455 ZNF534Q76KX8 674 aa5.07□□□□□ -1.6
SYNE2-210ENST00000553455 GCSAMQ8N6F7 178 aa5.07□□□□□ -1.6
SYNE2-210ENST00000553455 OR10S1Q8NGN2 331 aa5.07□□□□□ -1.6
SYNE2-210ENST00000553455 THAP6Q8TBB0 222 aa5.07□□□□□ -1.6
SYNE2-210ENST00000553455 MAGEC3Q8TD91 643 aa5.07□□□□□ -1.6
SYNE2-210ENST00000553455 FCRL4Q96PJ5 515 aa5.07□□□□□ -1.6
SYNE2-210ENST00000553455 MTERF1Q99551 399 aaKnown RBP5.07□□□□□ -1.6
SYNE2-210ENST00000553455 SEMA3CQ99985 751 aa5.07□□□□□ -1.6
SYNE2-210ENST00000553455 RAB6CQ9H0N0 254 aa5.07□□□□□ -1.6
SYNE2-210ENST00000553455 ZHX1Q9UKY1 873 aaPredicted RBP5.07□□□□□ -1.6
SYNE2-210ENST00000553455 CCL27Q9Y4X3 112 aa5.07□□□□□ -1.6
SYNE2-210ENST00000553455 ASTN2O75129 1339 aaPredicted RBP5.06□□□□□ -1.6
SYNE2-210ENST00000553455 PTPRCP08575 1304 aa5.06□□□□□ -1.6
SYNE2-210ENST00000553455 ZNF541Q9H0D2 1346 aa5.06□□□□□ -1.6
SYNE2-210ENST00000553455 FAM90A10PA6NDY2 464 aa5.06□□□□□ -1.6
SYNE2-210ENST00000553455 URADA6NGE7 173 aa5.06□□□□□ -1.6
SYNE2-210ENST00000553455 TSPY2A6NKD2 308 aa5.06□□□□□ -1.6
SYNE2-210ENST00000553455 TMEM189-UBE2V1I3L0A0 370 aa5.06□□□□□ -1.6
SYNE2-210ENST00000553455 CLGNO14967 610 aa5.06□□□□□ -1.6
SYNE2-210ENST00000553455 NDUFS4O43181 175 aa5.06□□□□□ -1.6
SYNE2-210ENST00000553455 LINC00271P0C7V0 271 aa5.06□□□□□ -1.6
SYNE2-210ENST00000553455 TSPY3P0CV98 308 aa5.06□□□□□ -1.6
SYNE2-210ENST00000553455 TSPY8P0CW00 308 aa5.06□□□□□ -1.6
SYNE2-210ENST00000553455 MYBL1P10243 752 aa5.06□□□□□ -1.6
SYNE2-210ENST00000553455 GLULP15104 373 aa5.06□□□□□ -1.6
SYNE2-210ENST00000553455 CCR3P51677 355 aa5.06□□□□□ -1.6
SYNE2-210ENST00000553455 TSPY1Q01534 308 aa5.06□□□□□ -1.6
SYNE2-210ENST00000553455 RUNX1T1Q06455 604 aa5.06□□□□□ -1.6
SYNE2-210ENST00000553455 ZNF155Q12901 538 aaPredicted RBP5.06□□□□□ -1.6
SYNE2-210ENST00000553455 MYBPHQ13203 477 aa5.06□□□□□ -1.6
SYNE2-210ENST00000553455 UBE2V1Q13404 147 aa5.06□□□□□ -1.6
SYNE2-210ENST00000553455 ZNF260Q3ZCT1 412 aa5.06□□□□□ -1.6
SYNE2-210ENST00000553455 TCP11X2Q5H9J9 407 aa5.06□□□□□ -1.6
SYNE2-210ENST00000553455 CCNI2Q6ZMN8 369 aaPredicted RBP5.06□□□□□ -1.6
SYNE2-210ENST00000553455 C9orf47Q6ZRZ4 202 aa5.06□□□□□ -1.6
SYNE2-210ENST00000553455 Q75L30 129 aa5.06□□□□□ -1.6
SYNE2-210ENST00000553455 GPR180Q86V85 440 aa5.06□□□□□ -1.6
SYNE2-210ENST00000553455 NKAIN3Q8N8D7 197 aa5.06□□□□□ -1.6
SYNE2-210ENST00000553455 TC2NQ8N9U0 490 aa5.06□□□□□ -1.6
SYNE2-210ENST00000553455 Q8NFD4 153 aa5.06□□□□□ -1.6
SYNE2-210ENST00000553455 CFAP61Q8NHU2 1237 aa5.06□□□□□ -1.6
SYNE2-210ENST00000553455 B4GALNT2Q8NHY0 566 aa5.06□□□□□ -1.6
SYNE2-210ENST00000553455 UTP15Q8TED0 518 aaKnown RBP5.06□□□□□ -1.6
SYNE2-210ENST00000553455 TMED6Q8WW62 240 aa5.06□□□□□ -1.6
SYNE2-210ENST00000553455 SMG7Q92540 1137 aaKnown RBP5.06□□□□□ -1.6
SYNE2-210ENST00000553455 LINC00615Q96LM1 132 aaPredicted RBP5.06□□□□□ -1.6
SYNE2-210ENST00000553455 C3orf30Q96M34 536 aa5.06□□□□□ -1.6
SYNE2-210ENST00000553455 GPR88Q9GZN0 384 aa5.06□□□□□ -1.6
SYNE2-210ENST00000553455 IL25Q9H293 177 aa5.06□□□□□ -1.6
SYNE2-210ENST00000553455 ST6GALNAC4Q9H4F1 302 aa5.06□□□□□ -1.6
SYNE2-210ENST00000553455 BCCIPQ9P287 314 aaKnown RBP eCLIP5.06□□□□□ -1.6
SYNE2-210ENST00000553455 A0A1W2PRQ8 180 aa5.05□□□□□ -1.6
SYNE2-210ENST00000553455 SPRY1O43609 319 aaPredicted RBP5.05□□□□□ -1.6
SYNE2-210ENST00000553455 WISP2O76076 250 aa5.05□□□□□ -1.6
SYNE2-210ENST00000553455 TOMM70O94826 608 aa5.05□□□□□ -1.6
SYNE2-210ENST00000553455 OAZ2O95190 189 aa5.05□□□□□ -1.6
SYNE2-210ENST00000553455 GGPS1O95749 300 aa5.05□□□□□ -1.6
SYNE2-210ENST00000553455 AFPP02771 609 aaKnown RBP5.05□□□□□ -1.6
SYNE2-210ENST00000553455 VPREB1P12018 145 aa5.05□□□□□ -1.6
SYNE2-210ENST00000553455 MC5RP33032 325 aa5.05□□□□□ -1.6
SYNE2-210ENST00000553455 CDH13P55290 713 aa5.05□□□□□ -1.6
SYNE2-210ENST00000553455 KRT33BQ14525 404 aa5.05□□□□□ -1.6
SYNE2-210ENST00000553455 CBWD6Q4V339 395 aa5.05□□□□□ -1.6
SYNE2-210ENST00000553455 CBWD3Q5JTY5 395 aa5.05□□□□□ -1.6
SYNE2-210ENST00000553455 AWAT2Q6E213 333 aa5.05□□□□□ -1.6
SYNE2-210ENST00000553455 RHBDF2Q6PJF5 856 aa5.05□□□□□ -1.6
SYNE2-210ENST00000553455 RBPMS2Q6ZRY4 209 aaKnown RBP5.05□□□□□ -1.6
SYNE2-210ENST00000553455 CAMKMTQ7Z624 323 aa5.05□□□□□ -1.6
SYNE2-210ENST00000553455 C1orf87Q8N0U7 546 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms