RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 NAT8LQ8N9F0 302 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 FAM46DQ8NEK8 389 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 GPR156Q8NFN8 814 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 OR6C4Q8NGE1 309 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 ZDHHC1Q8WTX9 485 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 HEXDCQ8WVB3 486 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 CDKN2AIPNLQ96HQ2 116 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 SGSM3Q96HU1 749 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 ZNF514Q96K75 400 aaPredicted RBP11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 TTC25Q96NG3 672 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 UGT1A7Q9HAW7 530 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 UGT1A10Q9HAW8 530 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 UGT1A8Q9HAW9 530 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 TREX1Q9NSU2 369 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 SYBUQ9NX95 663 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 PRKAB1Q9Y478 270 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 KNTC1P50748 2209 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 CHD8Q9HCK8 2581 aa11.56□□□□□ -0.56
TRAFD1-209ENST00000552896 CCDC78A2IDD5 438 aa11.55□□□□□ -0.56
TRAFD1-209ENST00000552896 KLHL33A6NCF5 533 aa11.55□□□□□ -0.56
TRAFD1-209ENST00000552896 PRR19A6NJB7 356 aa11.55□□□□□ -0.56
TRAFD1-209ENST00000552896 CFAP99D6REC4 459 aa11.55□□□□□ -0.56
TRAFD1-209ENST00000552896 DNALI1O14645 258 aaPredicted RBP11.55□□□□□ -0.56
TRAFD1-209ENST00000552896 RALBP11234 206 aa11.55□□□□□ -0.56
TRAFD1-209ENST00000552896 SLC2A4P14672 509 aa11.55□□□□□ -0.56
TRAFD1-209ENST00000552896 ZNF7P17097 686 aaPredicted RBP11.55□□□□□ -0.56
TRAFD1-209ENST00000552896 VCLP18206 1134 aa11.55□□□□□ -0.56
TRAFD1-209ENST00000552896 MSH3P20585 1137 aa11.55□□□□□ -0.56
TRAFD1-209ENST00000552896 ACRV1P26436 265 aa11.55□□□□□ -0.56
TRAFD1-209ENST00000552896 MGAT1P26572 445 aa11.55□□□□□ -0.56
TRAFD1-209ENST00000552896 FOXN2P32314 431 aa11.55□□□□□ -0.56
TRAFD1-209ENST00000552896 CA5AP35218 305 aa11.55□□□□□ -0.56
TRAFD1-209ENST00000552896 CRADDP78560 199 aa11.55□□□□□ -0.56
TRAFD1-209ENST00000552896 SHC2P98077 582 aa11.55□□□□□ -0.56
TRAFD1-209ENST00000552896 CKAP4Q07065 602 aaKnown RBP11.55□□□□□ -0.56
TRAFD1-209ENST00000552896 FOXC1Q12948 553 aa11.55□□□□□ -0.56
TRAFD1-209ENST00000552896 HLTFQ14527 1009 aaKnown RBP eCLIP11.55□□□□□ -0.56
TRAFD1-209ENST00000552896 INSCQ1MX18 579 aa11.55□□□□□ -0.56
TRAFD1-209ENST00000552896 KIF26BQ2KJY2 2108 aa11.55□□□□□ -0.56
TRAFD1-209ENST00000552896 PLA2G4EQ3MJ16 856 aa11.55□□□□□ -0.56
TRAFD1-209ENST00000552896 BCL7AQ4VC05 210 aa11.55□□□□□ -0.56
TRAFD1-209ENST00000552896 C14orf28Q4W4Y0 310 aa11.55□□□□□ -0.56
TRAFD1-209ENST00000552896 ZRANB3Q5FWF4 1079 aa11.55□□□□□ -0.56
TRAFD1-209ENST00000552896 C11orf96Q7Z7L8 435 aa11.55□□□□□ -0.56
TRAFD1-209ENST00000552896 PCGF5Q86SE9 256 aa11.55□□□□□ -0.56
TRAFD1-209ENST00000552896 CAND1Q86VP6 1230 aaKnown RBP11.55□□□□□ -0.56
TRAFD1-209ENST00000552896 C17orf82Q86X59 251 aaPredicted RBP11.55□□□□□ -0.56
TRAFD1-209ENST00000552896 IFI44Q8TCB0 444 aa11.55□□□□□ -0.56
TRAFD1-209ENST00000552896 SERPINB12Q96P63 405 aa11.55□□□□□ -0.56
TRAFD1-209ENST00000552896 COPS8Q99627 209 aa11.55□□□□□ -0.56
TRAFD1-209ENST00000552896 KIFC1Q9BW19 673 aa11.55□□□□□ -0.56
TRAFD1-209ENST00000552896 DPEP2Q9H4A9 486 aa11.55□□□□□ -0.56
TRAFD1-209ENST00000552896 SPATS2LQ9NUQ6 558 aaKnown RBP11.55□□□□□ -0.56
TRAFD1-209ENST00000552896 SLC2A6Q9UGQ3 507 aa11.55□□□□□ -0.56
TRAFD1-209ENST00000552896 PADI4Q9UM07 663 aa11.55□□□□□ -0.56
TRAFD1-209ENST00000552896 SOX13Q9UN79 622 aa11.55□□□□□ -0.56
TRAFD1-209ENST00000552896 WASF3Q9UPY6 502 aa11.55□□□□□ -0.56
TRAFD1-209ENST00000552896 KCNK6Q9Y257 313 aa11.55□□□□□ -0.56
TRAFD1-209ENST00000552896 PLEKHM1Q9Y4G2 1056 aa11.55□□□□□ -0.56
TRAFD1-209ENST00000552896 FRYQ5TBA9 3013 aa11.54□□□□□ -0.56
TRAFD1-209ENST00000552896 CCDC162PA2VCL2 907 aa11.54□□□□□ -0.56
TRAFD1-209ENST00000552896 A6NCN8 305 aa11.54□□□□□ -0.56
TRAFD1-209ENST00000552896 SMAPO00193 183 aa11.54□□□□□ -0.56
TRAFD1-209ENST00000552896 TTI1O43156 1089 aa11.54□□□□□ -0.56
TRAFD1-209ENST00000552896 MYF5P13349 255 aa11.54□□□□□ -0.56
TRAFD1-209ENST00000552896 PRLHRP49683 370 aa11.54□□□□□ -0.56
TRAFD1-209ENST00000552896 CTSCP53634 463 aa11.54□□□□□ -0.56
TRAFD1-209ENST00000552896 TERF1P54274 439 aa11.54□□□□□ -0.56
TRAFD1-209ENST00000552896 PRAMEP78395 509 aa11.54□□□□□ -0.56
TRAFD1-209ENST00000552896 B4GALNT1Q00973 533 aa11.54□□□□□ -0.56
TRAFD1-209ENST00000552896 E2F1Q01094 437 aa11.54□□□□□ -0.56
TRAFD1-209ENST00000552896 DMPKQ09013 629 aa11.54□□□□□ -0.56
TRAFD1-209ENST00000552896 SMAD1Q15797 465 aaKnown RBP11.54□□□□□ -0.56
TRAFD1-209ENST00000552896 CCDC157Q569K6 752 aa11.54□□□□□ -0.56
TRAFD1-209ENST00000552896 AARS2Q5JTZ9 985 aaKnown RBP11.54□□□□□ -0.56
TRAFD1-209ENST00000552896 LYPLAL1Q5VWZ2 237 aa11.54□□□□□ -0.56
TRAFD1-209ENST00000552896 IZUMO3Q5VZ72 239 aa11.54□□□□□ -0.56
TRAFD1-209ENST00000552896 DHRS13Q6UX07 377 aa11.54□□□□□ -0.56
TRAFD1-209ENST00000552896 PACS1Q6VY07 963 aa11.54□□□□□ -0.56
TRAFD1-209ENST00000552896 EFL1Q7Z2Z2 1120 aaKnown RBP11.54□□□□□ -0.56
TRAFD1-209ENST00000552896 ZNF438Q7Z4V0 828 aa11.54□□□□□ -0.56
TRAFD1-209ENST00000552896 SERPINA9Q86WD7 417 aa11.54□□□□□ -0.56
TRAFD1-209ENST00000552896 PIANPQ8IYJ0 282 aa11.54□□□□□ -0.56
TRAFD1-209ENST00000552896 NAGSQ8N159 534 aa11.54□□□□□ -0.56
TRAFD1-209ENST00000552896 GALNT15Q8N3T1 639 aa11.54□□□□□ -0.56
TRAFD1-209ENST00000552896 PNPLA1Q8N8W4 532 aa11.54□□□□□ -0.56
TRAFD1-209ENST00000552896 RASGEF1AQ8N9B8 481 aa11.54□□□□□ -0.56
TRAFD1-209ENST00000552896 SPATA4Q8NEY3 305 aa11.54□□□□□ -0.56
TRAFD1-209ENST00000552896 HDAC10Q969S8 669 aa11.54□□□□□ -0.56
TRAFD1-209ENST00000552896 DCUN1D1Q96GG9 259 aa11.54□□□□□ -0.56
TRAFD1-209ENST00000552896 ZNF778Q96MU6 729 aa11.54□□□□□ -0.56
TRAFD1-209ENST00000552896 KRT12Q99456 494 aa11.54□□□□□ -0.56
TRAFD1-209ENST00000552896 TRIM51Q9BSJ1 452 aa11.54□□□□□ -0.56
TRAFD1-209ENST00000552896 CHRAC1Q9NRG0 131 aa11.54□□□□□ -0.56
TRAFD1-209ENST00000552896 ZDHHC3Q9NYG2 299 aa11.54□□□□□ -0.56
TRAFD1-209ENST00000552896 SAMD15Q9P1V8 674 aa11.54□□□□□ -0.56
TRAFD1-209ENST00000552896 GULP1Q9UBP9 304 aa11.54□□□□□ -0.56
TRAFD1-209ENST00000552896 DNMT3AQ9Y6K1 912 aaPredicted RBP11.54□□□□□ -0.56
TRAFD1-209ENST00000552896 CPED1A4D0V7 1026 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms