RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 TOGARAM2Q6ZUX3 1019 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 CCDC186Q7Z3E2 898 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 WDR53Q7Z5U6 358 aaPredicted RBP5.05□□□□□ -1.6
SCAF11-214ENST00000550893 PIGZQ86VD9 579 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 UNC93AQ86WB7 457 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 RALGPS2Q86X27 583 aaPredicted RBP5.05□□□□□ -1.6
SCAF11-214ENST00000550893 NUP93Q8N1F7 819 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 ELMOD1Q8N336 334 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 WDTC1Q8N5D0 677 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 FRMD1Q8N878 549 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 FBXL13Q8NEE6 735 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 NELFBQ8WX92 580 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 ATOH1Q92858 354 aaPredicted RBP5.05□□□□□ -1.6
SCAF11-214ENST00000550893 REPS1Q96D71 796 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 MFSD1Q9H3U5 465 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 CLSTN2Q9H4D0 955 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 CXorf36Q9H7Y0 433 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 LMAN1LQ9HAT1 526 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 CYP3A43Q9HB55 503 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 TRPC7Q9HCX4 862 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 PNPLA8Q9NP80 782 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 DUSP22Q9NRW4 184 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 RAB20Q9NX57 234 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 SH3BP4Q9P0V3 963 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 SH2B3Q9UQQ2 575 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 SCML2Q9UQR0 700 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 ZFYVE26Q68DK2 2539 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 PKD1L2Q7Z442 2459 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 TRAV19A0A0A6YYK7 116 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 A0A1W2PQF6 199 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 PCNX2A6NKB5 2137 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 LINC01548A6NM66 108 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 YJEFN3A6XGL0 299 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 PRRT4C9JH25 899 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 E7ENQ6 273 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 PHGDHO43175 533 aaKnown RBP5.04□□□□□ -1.6
SCAF11-214ENST00000550893 HOXC11O43248 304 aaPredicted RBP5.04□□□□□ -1.6
SCAF11-214ENST00000550893 JTBO76095 146 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 FGF19O95750 216 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 IGLV3-25P01717 112 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 ENGP17813 658 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 BCKDHBP21953 392 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 HOXA6P31267 233 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 MAGEA9P43362 315 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 FKBP3Q00688 224 aaKnown RBP5.04□□□□□ -1.6
SCAF11-214ENST00000550893 CAMK4Q16566 473 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 GOLGA7BQ2TAP0 167 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 DGKKQ5KSL6 1271 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 NADSYN1Q6IA69 706 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 KLHL10Q6JEL2 608 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 CXorf57Q6NSI4 855 aaKnown RBP5.04□□□□□ -1.6
SCAF11-214ENST00000550893 PMF1Q6P1K2 205 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 TRIM65Q6PJ69 517 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 ZNF852Q6ZMS4 543 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 ZNF782Q6ZMW2 699 aaPredicted RBP5.04□□□□□ -1.6
SCAF11-214ENST00000550893 C11orf57Q6ZUT1 292 aaPredicted RBP5.04□□□□□ -1.6
SCAF11-214ENST00000550893 SLC29A4Q7RTT9 530 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 TMEM25Q86YD3 366 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 SPEM1Q8N4L4 309 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 IL17RCQ8NAC3 791 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 SEMA6DQ8NFY4 1073 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 SLC35F5Q8WV83 523 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 OVCA2Q8WZ82 227 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 MRPS31Q92665 395 aaKnown RBP5.04□□□□□ -1.6
SCAF11-214ENST00000550893 SMARCE1Q969G3 411 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 FBXO32Q969P5 355 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 JAKMIP2Q96AA8 810 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 R3HDM4Q96D70 268 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 RMDN1Q96DB5 314 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 MSANTD3Q96H12 275 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 DHTKD1Q96HY7 919 aaPredicted RBP5.04□□□□□ -1.6
SCAF11-214ENST00000550893 PRICKLE1Q96MT3 831 aaPredicted RBP5.04□□□□□ -1.6
SCAF11-214ENST00000550893 ACOX2Q99424 681 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 NAA15Q9BXJ9 866 aaKnown RBP5.04□□□□□ -1.6
SCAF11-214ENST00000550893 DUSP16Q9BY84 665 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 DPH1Q9BZG8 443 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 GANQ9H2C0 597 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 SNX25Q9H3E2 840 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 C8orf33Q9H7E9 229 aaPredicted RBP5.04□□□□□ -1.6
SCAF11-214ENST00000550893 CHORDC1Q9UHD1 332 aaPredicted RBP5.04□□□□□ -1.6
SCAF11-214ENST00000550893 TSPAN16Q9UKR8 245 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 SLCO1B1Q9Y6L6 691 aa5.04□□□□□ -1.6
SCAF11-214ENST00000550893 CABIN1Q9Y6J0 2220 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 DNAJC9-AS1A6NH13 148 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 TMEM233B4DJY2 109 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 SGK1O00141 431 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 PAPSS1O43252 624 aaPredicted RBP5.03□□□□□ -1.6
SCAF11-214ENST00000550893 MSI1O43347 362 aaKnown RBP5.03□□□□□ -1.6
SCAF11-214ENST00000550893 CACNG3O60359 315 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 PENKP01210 267 aaPredicted RBP5.03□□□□□ -1.6
SCAF11-214ENST00000550893 CELA2AP08217 269 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 FAM200BP0CF97 657 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 NHLRC4P0CG21 123 aaPredicted RBP5.03□□□□□ -1.6
SCAF11-214ENST00000550893 EPB41P11171 864 aaKnown RBP5.03□□□□□ -1.6
SCAF11-214ENST00000550893 YWHAQP27348 245 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 AVPR1AP37288 418 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 GPD2P43304 727 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 KLK7P49862 253 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 PDE6CP51160 858 aa5.03□□□□□ -1.6
SCAF11-214ENST00000550893 DGKEP52429 567 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms