RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 TEKT5Q96M29 485 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 DNAJC11Q9NVH1 559 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 CIDEBQ9UHD4 219 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 TCRBV9S1A1TA0A576 114 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 GTPBP1O00178 669 aaKnown RBP12.09□□□□□ -0.47
NR4A1-215ENST00000550557 NBNO60934 754 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 KRT33AO76009 404 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 CREB1P16220 341 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 GSCP56915 257 aaPredicted RBP12.09□□□□□ -0.47
NR4A1-215ENST00000550557 TBL3Q12788 808 aaKnown RBP12.09□□□□□ -0.47
NR4A1-215ENST00000550557 GSTA3Q16772 222 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 SH3PXD2AQ5TCZ1 1133 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 TCEAL8Q8IYN2 117 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 DEFB107AQ8IZN7 70 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 KIAA1143Q96AT1 154 aaPredicted RBP12.09□□□□□ -0.47
NR4A1-215ENST00000550557 CNDP1Q96KN2 507 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 MRPL57Q9BQC6 102 aaKnown RBP12.09□□□□□ -0.47
NR4A1-215ENST00000550557 AARSD1Q9BTE6 412 aaKnown RBP12.09□□□□□ -0.47
NR4A1-215ENST00000550557 TPSD1Q9BZJ3 242 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 FAM192AQ9GZU8 254 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 ATG10Q9H0Y0 220 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 CHRAC1Q9NRG0 131 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 H3BNH8 94 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 NTRK1P04629 796 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 SYPP08247 313 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 ATP6V1B1P15313 513 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 EPORP19235 508 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 TRIM69Q86WT6 500 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 TDRPQ86YL5 185 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 PLD3Q8IV08 490 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 TMEM132CQ8N3T6 1108 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 TERB1Q8NA31 727 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 POMGNT2Q8NAT1 580 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 PCDH19Q8TAB3 1148 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 RHOJQ9H4E5 214 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 HCFC2Q9Y5Z7 792 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 FAM170BA6NMN3 283 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 PTGESO14684 152 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 ITGA2BP08514 1039 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 VIPR1P32241 457 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 TAF1AQ15573 450 aaPredicted RBP12.09□□□□□ -0.47
NR4A1-215ENST00000550557 DPYSL2Q16555 572 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 CA9Q16790 459 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 BNC2Q6ZN30 1099 aaPredicted RBP12.09□□□□□ -0.47
NR4A1-215ENST00000550557 C16orf62Q7Z3J2 963 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 P3H2Q8IVL5 708 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 KLHDC9Q8NEP7 349 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 SLC22A18Q96BI1 424 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 GPR21Q99679 349 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 CNPPD1Q9BV87 410 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 STRADBQ9C0K7 418 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 ARHGEF3Q9NR81 526 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 NDUFAF1Q9Y375 327 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 IQCF5A8MTL0 148 aa12.08□□□□□ -0.47
NR4A1-215ENST00000550557 RFXAPO00287 272 aa12.08□□□□□ -0.47
NR4A1-215ENST00000550557 TPSB2P20231 275 aa12.08□□□□□ -0.47
NR4A1-215ENST00000550557 POU1F1P28069 291 aa12.08□□□□□ -0.47
NR4A1-215ENST00000550557 NOS3P29474 1203 aa12.08□□□□□ -0.47
NR4A1-215ENST00000550557 TAS2R50P59544 299 aa12.08□□□□□ -0.47
NR4A1-215ENST00000550557 TPSAB1Q15661 275 aa12.08□□□□□ -0.47
NR4A1-215ENST00000550557 PUS10Q3MIT2 529 aaKnown RBP12.08□□□□□ -0.47
NR4A1-215ENST00000550557 LRRTM4Q86VH4 590 aa12.08□□□□□ -0.47
NR4A1-215ENST00000550557 PPP3R2Q96LZ3 170 aa12.08□□□□□ -0.47
NR4A1-215ENST00000550557 CATSPER2Q96P56 530 aa12.08□□□□□ -0.47
NR4A1-215ENST00000550557 RERGLQ9H628 205 aa12.08□□□□□ -0.47
NR4A1-215ENST00000550557 PCDH12Q9NPG4 1184 aa12.08□□□□□ -0.47
NR4A1-215ENST00000550557 KRT84Q9NSB2 600 aa12.08□□□□□ -0.47
NR4A1-215ENST00000550557 FNIP2Q9P278 1114 aa12.08□□□□□ -0.47
NR4A1-215ENST00000550557 MRTO4Q9UKD2 239 aaKnown RBP12.08□□□□□ -0.47
NR4A1-215ENST00000550557 TCAF1Q9Y4C2 921 aa12.08□□□□□ -0.47
NR4A1-215ENST00000550557 PCDHB3Q9Y5E6 796 aa12.08□□□□□ -0.47
NR4A1-215ENST00000550557 C2orf78A6NCI8 922 aa12.08□□□□□ -0.48
NR4A1-215ENST00000550557 AHCYL1O43865 530 aa12.08□□□□□ -0.48
NR4A1-215ENST00000550557 TCEA3O75764 348 aa12.08□□□□□ -0.48
NR4A1-215ENST00000550557 KLK3P07288 261 aaPredicted RBP12.08□□□□□ -0.48
NR4A1-215ENST00000550557 OXTRP30559 389 aa12.08□□□□□ -0.48
NR4A1-215ENST00000550557 RUNX1T1Q06455 604 aa12.08□□□□□ -0.48
NR4A1-215ENST00000550557 SLC10A7Q0GE19 358 aa12.08□□□□□ -0.48
NR4A1-215ENST00000550557 ZCCHC23Q6ZST2 131 aa12.08□□□□□ -0.48
NR4A1-215ENST00000550557 SPATA6LQ8N4H0 392 aa12.08□□□□□ -0.48
NR4A1-215ENST00000550557 ZSCAN5AQ9BUG6 496 aa12.08□□□□□ -0.48
NR4A1-215ENST00000550557 RAB11FIP5Q9BXF6 653 aa12.08□□□□□ -0.48
NR4A1-215ENST00000550557 SGK2Q9HBY8 427 aa12.08□□□□□ -0.48
NR4A1-215ENST00000550557 CCDC154A6NI56 674 aa12.08□□□□□ -0.48
NR4A1-215ENST00000550557 M0R3G1 203 aa12.08□□□□□ -0.48
NR4A1-215ENST00000550557 PSMA4P25789 261 aaKnown RBP12.08□□□□□ -0.48
NR4A1-215ENST00000550557 MRPS15P82914 257 aaKnown RBP12.08□□□□□ -0.48
NR4A1-215ENST00000550557 FASTKD3Q14CZ7 662 aaKnown RBP12.08□□□□□ -0.48
NR4A1-215ENST00000550557 SLC1A5Q15758 541 aa12.08□□□□□ -0.48
NR4A1-215ENST00000550557 TRIM40Q6P9F5 258 aa12.08□□□□□ -0.48
NR4A1-215ENST00000550557 LDB1Q86U70 411 aaPredicted RBP12.08□□□□□ -0.48
NR4A1-215ENST00000550557 TRAPPC9Q96Q05 1148 aa12.08□□□□□ -0.48
NR4A1-215ENST00000550557 SLC32A1Q9H598 525 aa12.08□□□□□ -0.48
NR4A1-215ENST00000550557 PIF1Q9H611 641 aa12.08□□□□□ -0.48
NR4A1-215ENST00000550557 DDX28Q9NUL7 540 aaKnown RBP12.08□□□□□ -0.48
NR4A1-215ENST00000550557 DTLQ9NZJ0 730 aa12.08□□□□□ -0.48
NR4A1-215ENST00000550557 SATB2Q9UPW6 733 aa12.08□□□□□ -0.48
NR4A1-215ENST00000550557 A0A1W2PP55 124 aa12.08□□□□□ -0.48
NR4A1-215ENST00000550557 ZNF217O75362 1048 aa12.08□□□□□ -0.48
NR4A1-215ENST00000550557 PIAS1O75925 651 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms