RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 CCDC28BQ9BUN5 200 aa20.73■□□□□ 0.91
PRDM4-205ENST00000550376 EBF3Q9H4W6 596 aa20.73■□□□□ 0.91
PRDM4-205ENST00000550376 EIF2B4Q9UI10 523 aaKnown RBP20.73■□□□□ 0.91
PRDM4-205ENST00000550376 RGSL1A5PLK6 1076 aa20.72■□□□□ 0.91
PRDM4-205ENST00000550376 C9JVG2 144 aa20.72■□□□□ 0.91
PRDM4-205ENST00000550376 C5orf67F2Z3F1 127 aa20.72■□□□□ 0.91
PRDM4-205ENST00000550376 STX16-NPEPL1H3BU86 382 aa20.72■□□□□ 0.91
PRDM4-205ENST00000550376 WFS1O76024 890 aa20.72■□□□□ 0.91
PRDM4-205ENST00000550376 SPAM1P38567 509 aa20.72■□□□□ 0.91
PRDM4-205ENST00000550376 CYLC2Q14093 348 aaPredicted RBP20.72■□□□□ 0.91
PRDM4-205ENST00000550376 MAGEC3Q8TD91 643 aa20.72■□□□□ 0.91
PRDM4-205ENST00000550376 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.72■□□□□ 0.91
PRDM4-205ENST00000550376 MMADHCQ9H3L0 296 aaPredicted RBP20.72■□□□□ 0.91
PRDM4-205ENST00000550376 TUBB1Q9H4B7 451 aa20.72■□□□□ 0.91
PRDM4-205ENST00000550376 DUS2Q9NX74 493 aaKnown RBP20.72■□□□□ 0.91
PRDM4-205ENST00000550376 ADAMTS6Q9UKP5 1117 aa20.72■□□□□ 0.91
PRDM4-205ENST00000550376 DHRS7Q9Y394 339 aa20.72■□□□□ 0.91
PRDM4-205ENST00000550376 PIP5K1BO14986 540 aa20.72■□□□□ 0.91
PRDM4-205ENST00000550376 PFKLP17858 780 aa20.72■□□□□ 0.91
PRDM4-205ENST00000550376 HK2P52789 917 aa20.72■□□□□ 0.91
PRDM4-205ENST00000550376 TGFBIQ15582 683 aa20.72■□□□□ 0.91
PRDM4-205ENST00000550376 ARHGAP24Q8N264 748 aa20.72■□□□□ 0.91
PRDM4-205ENST00000550376 PBXIP1Q96AQ6 731 aa20.72■□□□□ 0.91
PRDM4-205ENST00000550376 ACOX2Q99424 681 aa20.72■□□□□ 0.91
PRDM4-205ENST00000550376 CCDC167Q9P0B6 97 aa20.72■□□□□ 0.91
PRDM4-205ENST00000550376 ZNF225Q9UK10 706 aa20.72■□□□□ 0.91
PRDM4-205ENST00000550376 APPL1Q9UKG1 709 aa20.72■□□□□ 0.91
PRDM4-205ENST00000550376 YBX2Q9Y2T7 364 aaKnown RBP20.72■□□□□ 0.91
PRDM4-205ENST00000550376 COMMD10Q9Y6G5 202 aa20.72■□□□□ 0.91
PRDM4-205ENST00000550376 WASF2Q9Y6W5 498 aa20.72■□□□□ 0.91
PRDM4-205ENST00000550376 CTSLP07711 333 aa20.71■□□□□ 0.91
PRDM4-205ENST00000550376 HNRNPA1P09651 372 aaKnown RBP eCLIP20.71■□□□□ 0.91
PRDM4-205ENST00000550376 SLC6A11P48066 632 aa20.71■□□□□ 0.91
PRDM4-205ENST00000550376 UBE3AQ05086 875 aa20.71■□□□□ 0.91
PRDM4-205ENST00000550376 TBL3Q12788 808 aaKnown RBP20.71■□□□□ 0.91
PRDM4-205ENST00000550376 GDPD4Q6W3E5 623 aa20.71■□□□□ 0.91
PRDM4-205ENST00000550376 USP45Q70EL2 814 aa20.71■□□□□ 0.91
PRDM4-205ENST00000550376 ISG20Q96AZ6 181 aaKnown RBP20.71■□□□□ 0.91
PRDM4-205ENST00000550376 C19orf60Q96EN9 201 aa20.71■□□□□ 0.91
PRDM4-205ENST00000550376 MRGPRX3Q96LB0 322 aa20.71■□□□□ 0.91
PRDM4-205ENST00000550376 IGFLR1Q9H665 355 aa20.71■□□□□ 0.91
PRDM4-205ENST00000550376 AKTIPQ9H8T0 292 aa20.71■□□□□ 0.91
PRDM4-205ENST00000550376 TBC1D14Q9P2M4 693 aa20.71■□□□□ 0.91
PRDM4-205ENST00000550376 UBDO15205 165 aa20.71■□□□□ 0.91
PRDM4-205ENST00000550376 GPC4O75487 556 aa20.71■□□□□ 0.91
PRDM4-205ENST00000550376 FGF19O95750 216 aa20.71■□□□□ 0.91
PRDM4-205ENST00000550376 CYP17A1P05093 508 aa20.71■□□□□ 0.91
PRDM4-205ENST00000550376 C1SP09871 688 aa20.71■□□□□ 0.91
PRDM4-205ENST00000550376 THRAP10827 490 aa20.71■□□□□ 0.91
PRDM4-205ENST00000550376 ARL1P40616 181 aaPredicted RBP20.71■□□□□ 0.91
PRDM4-205ENST00000550376 METAP1P53582 386 aa20.71■□□□□ 0.91
PRDM4-205ENST00000550376 GRB7Q14451 532 aa20.71■□□□□ 0.91
PRDM4-205ENST00000550376 SHHQ15465 462 aa20.71■□□□□ 0.91
PRDM4-205ENST00000550376 CERS6Q6ZMG9 384 aa20.71■□□□□ 0.91
PRDM4-205ENST00000550376 RBFAQ8N0V3 343 aa20.71■□□□□ 0.91
PRDM4-205ENST00000550376 CLYBLQ8N0X4 340 aa20.71■□□□□ 0.91
PRDM4-205ENST00000550376 PELI3Q8N2H9 469 aa20.71■□□□□ 0.91
PRDM4-205ENST00000550376 STK40Q8N2I9 435 aa20.71■□□□□ 0.91
PRDM4-205ENST00000550376 CPSF7Q8N684 471 aaKnown RBP20.71■□□□□ 0.91
PRDM4-205ENST00000550376 PCDH20Q8N6Y1 951 aaKnown RBP20.71■□□□□ 0.91
PRDM4-205ENST00000550376 PIKFYVEQ9Y2I7 2098 aa20.71■□□□□ 0.91
PRDM4-205ENST00000550376 HELZP42694 1942 aaKnown RBP20.7■□□□□ 0.9
PRDM4-205ENST00000550376 AZIN1O14977 448 aa20.7■□□□□ 0.9
PRDM4-205ENST00000550376 SNX2O60749 519 aa20.7■□□□□ 0.9
PRDM4-205ENST00000550376 RPSAP08865 295 aaKnown RBP20.7■□□□□ 0.9
PRDM4-205ENST00000550376 RECQLP46063 649 aaPredicted RBP20.7■□□□□ 0.9
PRDM4-205ENST00000550376 ATXN3P54252 364 aaPredicted RBP20.7■□□□□ 0.9
PRDM4-205ENST00000550376 ADARP55265 1226 aaKnown RBP20.7■□□□□ 0.9
PRDM4-205ENST00000550376 CCDC6Q16204 474 aa20.7■□□□□ 0.9
PRDM4-205ENST00000550376 ZNF648Q5T619 568 aaPredicted RBP20.7■□□□□ 0.9
PRDM4-205ENST00000550376 ANKS6Q68DC2 871 aa20.7■□□□□ 0.9
PRDM4-205ENST00000550376 METTL3Q86U44 580 aaKnown RBP20.7■□□□□ 0.9
PRDM4-205ENST00000550376 NXPE1Q8N323 547 aa20.7■□□□□ 0.9
PRDM4-205ENST00000550376 VN1R2Q8NFZ6 395 aa20.7■□□□□ 0.9
PRDM4-205ENST00000550376 FRS2Q8WU20 508 aa20.7■□□□□ 0.9
PRDM4-205ENST00000550376 TWIST2Q8WVJ9 160 aa20.7■□□□□ 0.9
PRDM4-205ENST00000550376 TRMOQ9BU70 441 aa20.7■□□□□ 0.9
PRDM4-205ENST00000550376 TBX10O75333 385 aa20.7■□□□□ 0.9
PRDM4-205ENST00000550376 PSMG1O95456 288 aa20.7■□□□□ 0.9
PRDM4-205ENST00000550376 ENO3P13929 434 aaPredicted RBP20.7■□□□□ 0.9
PRDM4-205ENST00000550376 HOXA9P31269 272 aa20.7■□□□□ 0.9
PRDM4-205ENST00000550376 B4GALNT1Q00973 533 aa20.7■□□□□ 0.9
PRDM4-205ENST00000550376 GALNT1Q10472 559 aaPredicted RBP20.7■□□□□ 0.9
PRDM4-205ENST00000550376 GRAMD4Q6IC98 578 aa20.7■□□□□ 0.9
PRDM4-205ENST00000550376 SYVN1Q86TM6 617 aa20.7■□□□□ 0.9
PRDM4-205ENST00000550376 OR52B6Q8NGF0 335 aa20.7■□□□□ 0.9
PRDM4-205ENST00000550376 DLG3Q92796 817 aa20.7■□□□□ 0.9
PRDM4-205ENST00000550376 HBEGFQ99075 208 aa20.7■□□□□ 0.9
PRDM4-205ENST00000550376 RTKNQ9BST9 563 aa20.7■□□□□ 0.9
PRDM4-205ENST00000550376 HGH1Q9BTY7 390 aa20.7■□□□□ 0.9
PRDM4-205ENST00000550376 FAM8A1Q9UBU6 413 aa20.7■□□□□ 0.9
PRDM4-205ENST00000550376 TMPRSS11EQ9UL52 423 aa20.7■□□□□ 0.9
PRDM4-205ENST00000550376 RFXAPO00287 272 aa20.69■□□□□ 0.9
PRDM4-205ENST00000550376 CIB2O75838 187 aa20.69■□□□□ 0.9
PRDM4-205ENST00000550376 ALDOCP09972 364 aaKnown RBP20.69■□□□□ 0.9
PRDM4-205ENST00000550376 GDF5P43026 501 aa20.69■□□□□ 0.9
PRDM4-205ENST00000550376 PKNOX1P55347 436 aa20.69■□□□□ 0.9
PRDM4-205ENST00000550376 RBBP7Q16576 425 aa20.69■□□□□ 0.9
PRDM4-205ENST00000550376 AGKQ53H12 422 aa20.69■□□□□ 0.9
PRDM4-205ENST00000550376 FAM78AQ5JUQ0 283 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms