RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 TESMINQ9Y4I5 508 aa12.02□□□□□ -0.48
VDR-208ENST00000550325 UPK1BO75841 260 aa12.02□□□□□ -0.49
VDR-208ENST00000550325 CDK14O94921 469 aa12.02□□□□□ -0.49
VDR-208ENST00000550325 ITIH1P19827 911 aa12.02□□□□□ -0.49
VDR-208ENST00000550325 ARCN1P48444 511 aaKnown RBP12.02□□□□□ -0.49
VDR-208ENST00000550325 SMU1Q2TAY7 513 aa12.02□□□□□ -0.49
VDR-208ENST00000550325 ZNF678Q5SXM1 525 aa12.02□□□□□ -0.49
VDR-208ENST00000550325 ZCCHC8Q6NZY4 707 aaKnown RBP12.02□□□□□ -0.49
VDR-208ENST00000550325 CYHR1Q6ZMK1 362 aa12.02□□□□□ -0.49
VDR-208ENST00000550325 FKBP9P1Q75LS8 142 aa12.02□□□□□ -0.49
VDR-208ENST00000550325 CENPOQ9BU64 300 aa12.02□□□□□ -0.49
VDR-208ENST00000550325 SMOC2Q9H3U7 446 aa12.02□□□□□ -0.49
VDR-208ENST00000550325 NTN4Q9HB63 628 aa12.02□□□□□ -0.49
VDR-208ENST00000550325 OAS3Q9Y6K5 1087 aaKnown RBP12.02□□□□□ -0.49
VDR-208ENST00000550325 TCRBV5S2A0A599 114 aa12.02□□□□□ -0.49
VDR-208ENST00000550325 TRIM64BA6NI03 449 aa12.02□□□□□ -0.49
VDR-208ENST00000550325 SLC22A3O75751 556 aa12.02□□□□□ -0.49
VDR-208ENST00000550325 DNTTP04053 509 aa12.02□□□□□ -0.49
VDR-208ENST00000550325 ANXA6P08133 673 aa12.02□□□□□ -0.49
VDR-208ENST00000550325 UMPSP11172 480 aa12.02□□□□□ -0.49
VDR-208ENST00000550325 DGKQP52824 942 aa12.02□□□□□ -0.49
VDR-208ENST00000550325 SMN1Q16637 294 aaKnown RBP12.02□□□□□ -0.49
VDR-208ENST00000550325 ZDHHC17Q8IUH5 632 aa12.02□□□□□ -0.49
VDR-208ENST00000550325 RHOXF1Q8NHV9 184 aa12.02□□□□□ -0.49
VDR-208ENST00000550325 CEP19Q96LK0 163 aa12.02□□□□□ -0.49
VDR-208ENST00000550325 ZNF560Q96MR9 790 aa12.02□□□□□ -0.49
VDR-208ENST00000550325 ARPC5LQ9BPX5 153 aa12.02□□□□□ -0.49
VDR-208ENST00000550325 TRIM54Q9BYV2 358 aa12.02□□□□□ -0.49
VDR-208ENST00000550325 AMBNQ9NP70 447 aa12.02□□□□□ -0.49
VDR-208ENST00000550325 TNFSF13BQ9Y275 285 aa12.02□□□□□ -0.49
VDR-208ENST00000550325 CNTNAP1P78357 1384 aa12.02□□□□□ -0.49
VDR-208ENST00000550325 HOXC11O43248 304 aaPredicted RBP12.01□□□□□ -0.49
VDR-208ENST00000550325 CXCR2P25025 360 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 POLR2JP52435 117 aaKnown RBP12.01□□□□□ -0.49
VDR-208ENST00000550325 OR2B6P58173 313 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 INCA1Q0VD86 236 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 SELPLGQ14242 412 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 TARBP2Q15633 366 aaKnown RBP12.01□□□□□ -0.49
VDR-208ENST00000550325 CELF3Q5SZQ8 465 aaKnown RBP12.01□□□□□ -0.49
VDR-208ENST00000550325 AHSA2Q719I0 299 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 DTWD1Q8N5C7 304 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 KIFC1Q9BW19 673 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 PAQR5Q9NXK6 330 aaPredicted RBP12.01□□□□□ -0.49
VDR-208ENST00000550325 SNTG2Q9NY99 539 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 KLK14Q9P0G3 267 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 ADGRE2Q9UHX3 823 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 LEF1Q9UJU2 399 aaPredicted RBP12.01□□□□□ -0.49
VDR-208ENST00000550325 SLX4Q8IY92 1834 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 A0A1W2PP18 115 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 UBA6A0AVT1 1052 aaPredicted RBP12.01□□□□□ -0.49
VDR-208ENST00000550325 ASB14A6NK59 587 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 GOT2P00505 430 aaKnown RBP12.01□□□□□ -0.49
VDR-208ENST00000550325 CCDC159P0C7I6 412 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 HSMCR30P0CW71 290 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 RAP2AP10114 183 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 GGT5P36269 586 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 CYP4F2P78329 520 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 CYP4F3Q08477 520 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 C8orf82Q6P1X6 216 aaPredicted RBP12.01□□□□□ -0.49
VDR-208ENST00000550325 BLOC1S3Q6QNY0 202 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 GALNT12Q8IXK2 581 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 FAM126BQ8IXS8 530 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 TEKT5Q96M29 485 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 TEX13BQ9BXU2 312 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 CPNE5Q9HCH3 593 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 N6AMT1Q9Y5N5 214 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 M0QX08 132 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 SSX4O60224 188 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 MT-ND2P03891 347 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 CYBBP04839 570 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 LCKP06239 509 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 ARF4P18085 180 aaPredicted RBP12.01□□□□□ -0.49
VDR-208ENST00000550325 ADRA1BP35368 520 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 MAP3K7CLP57077 242 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 MBTD1Q05BQ5 628 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 RAPSNQ13702 412 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 DALRD3Q5D0E6 543 aaKnown RBP12.01□□□□□ -0.49
VDR-208ENST00000550325 RAP1GAP2Q684P5 730 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 GADL1Q6ZQY3 521 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 SVOPQ8N4V2 548 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 GIPC2Q8TF65 315 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 CENPIQ92674 756 aaPredicted RBP12.01□□□□□ -0.49
VDR-208ENST00000550325 TXNDC15Q96J42 360 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 PLSCR3Q9NRY6 295 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 PIM2Q9P1W9 311 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 C3orf18Q9UK00 162 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 TRHDEQ9UKU6 1024 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 NME7Q9Y5B8 376 aa12.01□□□□□ -0.49
VDR-208ENST00000550325 A0A1B0GTL3 188 aa12□□□□□ -0.49
VDR-208ENST00000550325 PRMT5O14744 637 aaPredicted RBP12□□□□□ -0.49
VDR-208ENST00000550325 CD4P01730 458 aa12□□□□□ -0.49
VDR-208ENST00000550325 FYNP06241 537 aa12□□□□□ -0.49
VDR-208ENST00000550325 CYP2C8P10632 490 aa12□□□□□ -0.49
VDR-208ENST00000550325 DEFA1P59665 94 aa12□□□□□ -0.49
VDR-208ENST00000550325 DEFA3P59666 94 aa12□□□□□ -0.49
VDR-208ENST00000550325 TRIM60Q495X7 471 aa12□□□□□ -0.49
VDR-208ENST00000550325 GALNT13Q8IUC8 556 aa12□□□□□ -0.49
VDR-208ENST00000550325 SH3RF2Q8TEC5 729 aa12□□□□□ -0.49
VDR-208ENST00000550325 WNT8BQ93098 351 aa12□□□□□ -0.49
VDR-208ENST00000550325 SLC47A1Q96FL8 570 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms