RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 MAATS1Q7Z4T9 603 aa22.23■■□□□ 1.15
BRF1-216ENST00000550208 LRRTM4Q86VH4 590 aa22.23■■□□□ 1.15
BRF1-216ENST00000550208 HOOK3Q86VS8 718 aa22.23■■□□□ 1.15
BRF1-216ENST00000550208 SLC35F3Q8IY50 421 aa22.23■■□□□ 1.15
BRF1-216ENST00000550208 AGGF1Q8N302 714 aaeCLIP22.23■■□□□ 1.15
BRF1-216ENST00000550208 KIF18AQ8NI77 898 aa22.23■■□□□ 1.15
BRF1-216ENST00000550208 PEX13Q92968 403 aa22.23■■□□□ 1.15
BRF1-216ENST00000550208 MFSD3Q96ES6 412 aa22.23■■□□□ 1.15
BRF1-216ENST00000550208 SGF29Q96ES7 293 aa22.23■■□□□ 1.15
BRF1-216ENST00000550208 SIGLEC10Q96LC7 697 aa22.23■■□□□ 1.15
BRF1-216ENST00000550208 DPEP2Q9H4A9 486 aa22.23■■□□□ 1.15
BRF1-216ENST00000550208 MRM3Q9HC36 420 aaKnown RBP22.23■■□□□ 1.15
BRF1-216ENST00000550208 ZDHHC3Q9NYG2 299 aa22.23■■□□□ 1.15
BRF1-216ENST00000550208 KCNK6Q9Y257 313 aa22.23■■□□□ 1.15
BRF1-216ENST00000550208 CKMT1AP12532 417 aa22.22■■□□□ 1.15
BRF1-216ENST00000550208 ZNF7P17097 686 aaPredicted RBP22.22■■□□□ 1.15
BRF1-216ENST00000550208 ACRV1P26436 265 aa22.22■■□□□ 1.15
BRF1-216ENST00000550208 MAGEA3P43357 314 aa22.22■■□□□ 1.15
BRF1-216ENST00000550208 ITGA8P53708 1063 aa22.22■■□□□ 1.15
BRF1-216ENST00000550208 LRP8Q14114 963 aa22.22■■□□□ 1.15
BRF1-216ENST00000550208 NR0B2Q15466 257 aa22.22■■□□□ 1.15
BRF1-216ENST00000550208 PLA2G4EQ3MJ16 856 aa22.22■■□□□ 1.15
BRF1-216ENST00000550208 FNBP1LQ5T0N5 605 aa22.22■■□□□ 1.15
BRF1-216ENST00000550208 HIBCHQ6NVY1 386 aaPredicted RBP22.22■■□□□ 1.15
BRF1-216ENST00000550208 CASC4Q6P4E1 433 aa22.22■■□□□ 1.15
BRF1-216ENST00000550208 DET1Q7L5Y6 550 aa22.22■■□□□ 1.15
BRF1-216ENST00000550208 OR4L1Q8NH43 312 aa22.22■■□□□ 1.15
BRF1-216ENST00000550208 GLMNQ92990 594 aa22.22■■□□□ 1.15
BRF1-216ENST00000550208 PWWP2AQ96N64 755 aa22.22■■□□□ 1.15
BRF1-216ENST00000550208 COPS8Q99627 209 aa22.22■■□□□ 1.15
BRF1-216ENST00000550208 TRIM56Q9BRZ2 755 aaKnown RBP22.22■■□□□ 1.15
BRF1-216ENST00000550208 ZCCHC2Q9C0B9 1178 aaKnown RBP22.22■■□□□ 1.15
BRF1-216ENST00000550208 KLC4Q9NSK0 619 aa22.22■■□□□ 1.15
BRF1-216ENST00000550208 MRFAP1Q9Y605 127 aa22.22■■□□□ 1.15
BRF1-216ENST00000550208 GOLGA4Q13439 2230 aaKnown RBP22.21■■□□□ 1.15
BRF1-216ENST00000550208 MAGEB16A2A368 324 aa22.21■■□□□ 1.15
BRF1-216ENST00000550208 CPED1A4D0V7 1026 aa22.21■■□□□ 1.15
BRF1-216ENST00000550208 OR2AG2A6NM03 316 aa22.21■■□□□ 1.15
BRF1-216ENST00000550208 B4DGG1 531 aa22.21■■□□□ 1.15
BRF1-216ENST00000550208 NOBOXO60393 691 aa22.21■■□□□ 1.15
BRF1-216ENST00000550208 ACP1P24666 158 aa22.21■■□□□ 1.15
BRF1-216ENST00000550208 RPL21P46778 160 aaKnown RBP22.21■■□□□ 1.15
BRF1-216ENST00000550208 ACADVLP49748 655 aa22.21■■□□□ 1.15
BRF1-216ENST00000550208 PRAMEP78395 509 aa22.21■■□□□ 1.15
BRF1-216ENST00000550208 TUBB2AQ13885 445 aa22.21■■□□□ 1.15
BRF1-216ENST00000550208 MORF4L2Q15014 288 aa22.21■■□□□ 1.15
BRF1-216ENST00000550208 DBN1Q16643 649 aa22.21■■□□□ 1.15
BRF1-216ENST00000550208 AFTPHQ6ULP2 937 aa22.21■■□□□ 1.15
BRF1-216ENST00000550208 C11orf96Q7Z7L8 435 aa22.21■■□□□ 1.15
BRF1-216ENST00000550208 TRAPPC5Q8IUR0 188 aa22.21■■□□□ 1.15
BRF1-216ENST00000550208 KYQ8NBH2 561 aa22.21■■□□□ 1.15
BRF1-216ENST00000550208 GPR156Q8NFN8 814 aa22.21■■□□□ 1.15
BRF1-216ENST00000550208 ZDHHC1Q8WTX9 485 aa22.21■■□□□ 1.15
BRF1-216ENST00000550208 DCUN1D1Q96GG9 259 aa22.21■■□□□ 1.15
BRF1-216ENST00000550208 SNF8Q96H20 258 aa22.21■■□□□ 1.15
BRF1-216ENST00000550208 FCRL3Q96P31 734 aaPredicted RBP22.21■■□□□ 1.15
BRF1-216ENST00000550208 ERP44Q9BS26 406 aa22.21■■□□□ 1.15
BRF1-216ENST00000550208 TUBB2BQ9BVA1 445 aa22.21■■□□□ 1.15
BRF1-216ENST00000550208 ANAPC5Q9UJX4 755 aa22.21■■□□□ 1.15
BRF1-216ENST00000550208 PADI4Q9UM07 663 aa22.21■■□□□ 1.15
BRF1-216ENST00000550208 APOBEC2Q9Y235 224 aaKnown RBP22.21■■□□□ 1.15
BRF1-216ENST00000550208 ARHGEF17Q96PE2 2063 aaPredicted RBP22.21■■□□□ 1.15
BRF1-216ENST00000550208 TRBV23OR9-2A0A075B6M9 112 aa22.2■■□□□ 1.14
BRF1-216ENST00000550208 SGTAO43765 313 aa22.2■■□□□ 1.14
BRF1-216ENST00000550208 POP7O75817 140 aaKnown RBP22.2■■□□□ 1.14
BRF1-216ENST00000550208 SEC31AO94979 1220 aaKnown RBP22.2■■□□□ 1.14
BRF1-216ENST00000550208 EML2O95834 649 aa22.2■■□□□ 1.14
BRF1-216ENST00000550208 DUSP3P51452 185 aaPredicted RBP22.2■■□□□ 1.14
BRF1-216ENST00000550208 MSS51Q4VC12 460 aa22.2■■□□□ 1.14
BRF1-216ENST00000550208 BEND7Q8N7W2 519 aaPredicted RBP22.2■■□□□ 1.14
BRF1-216ENST00000550208 ARL10Q8N8L6 244 aa22.2■■□□□ 1.14
BRF1-216ENST00000550208 HEXDCQ8WVB3 486 aa22.2■■□□□ 1.14
BRF1-216ENST00000550208 SGSM3Q96HU1 749 aa22.2■■□□□ 1.14
BRF1-216ENST00000550208 SAMD15Q9P1V8 674 aa22.2■■□□□ 1.14
BRF1-216ENST00000550208 TBC1D29Q9UFV1 150 aa22.2■■□□□ 1.14
BRF1-216ENST00000550208 DNAJC16Q9Y2G8 782 aa22.2■■□□□ 1.14
BRF1-216ENST00000550208 DCHS1Q96JQ0 3298 aa22.19■■□□□ 1.14
BRF1-216ENST00000550208 IGLV3-16A0A075B6K0 115 aa22.19■■□□□ 1.14
BRF1-216ENST00000550208 TP73O15350 636 aa22.19■■□□□ 1.14
BRF1-216ENST00000550208 SNX2O60749 519 aa22.19■■□□□ 1.14
BRF1-216ENST00000550208 BANF1O75531 89 aa22.19■■□□□ 1.14
BRF1-216ENST00000550208 DKK1O94907 266 aa22.19■■□□□ 1.14
BRF1-216ENST00000550208 VAPBO95292 243 aa22.19■■□□□ 1.14
BRF1-216ENST00000550208 RALBP11234 206 aa22.19■■□□□ 1.14
BRF1-216ENST00000550208 ATP1B2P14415 290 aaPredicted RBP22.19■■□□□ 1.14
BRF1-216ENST00000550208 RPIAP49247 311 aa22.19■■□□□ 1.14
BRF1-216ENST00000550208 CLCNKAP51800 687 aa22.19■■□□□ 1.14
BRF1-216ENST00000550208 SEMA3AQ14563 771 aa22.19■■□□□ 1.14
BRF1-216ENST00000550208 INSCQ1MX18 579 aa22.19■■□□□ 1.14
BRF1-216ENST00000550208 ANKRD20A4Q4UJ75 823 aa22.19■■□□□ 1.14
BRF1-216ENST00000550208 FASTKD1Q53R41 847 aaKnown RBP22.19■■□□□ 1.14
BRF1-216ENST00000550208 ARMC3Q5W041 872 aa22.19■■□□□ 1.14
BRF1-216ENST00000550208 GUSBP11Q6P575 273 aa22.19■■□□□ 1.14
BRF1-216ENST00000550208 PATE1Q8WXA2 126 aa22.19■■□□□ 1.14
BRF1-216ENST00000550208 TIMM29Q9BSF4 260 aa22.19■■□□□ 1.14
BRF1-216ENST00000550208 DPH5Q9H2P9 285 aa22.19■■□□□ 1.14
BRF1-216ENST00000550208 NCKIPSDQ9NZQ3 722 aa22.19■■□□□ 1.14
BRF1-216ENST00000550208 MAD1L1Q9Y6D9 718 aa22.19■■□□□ 1.14
BRF1-216ENST00000550208 DNMT3AQ9Y6K1 912 aaPredicted RBP22.19■■□□□ 1.14
BRF1-216ENST00000550208 FAM237BA0A1B0GVD1 139 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms