RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 TENM4Q6N022 2769 aa13.24□□□□□ -0.29
GCN1-206ENST00000549815 MN1Q10571 1320 aaPredicted RBP13.23□□□□□ -0.29
GCN1-206ENST00000549815 A8MU76 341 aa13.23□□□□□ -0.29
GCN1-206ENST00000549815 HACD1B0YJ81 288 aa13.23□□□□□ -0.29
GCN1-206ENST00000549815 B8ZZF3 427 aa13.23□□□□□ -0.29
GCN1-206ENST00000549815 KMOO15229 486 aa13.23□□□□□ -0.29
GCN1-206ENST00000549815 MTSS1O43312 755 aa13.23□□□□□ -0.29
GCN1-206ENST00000549815 C9P02748 559 aa13.23□□□□□ -0.29
GCN1-206ENST00000549815 FECHP22830 423 aa13.23□□□□□ -0.29
GCN1-206ENST00000549815 CHRNA4P43681 627 aa13.23□□□□□ -0.29
GCN1-206ENST00000549815 RAB15P59190 212 aa13.23□□□□□ -0.29
GCN1-206ENST00000549815 MC2RQ01718 297 aa13.23□□□□□ -0.29
GCN1-206ENST00000549815 INSCQ1MX18 579 aa13.23□□□□□ -0.29
GCN1-206ENST00000549815 PLA2G4EQ3MJ16 856 aa13.23□□□□□ -0.29
GCN1-206ENST00000549815 ANKS6Q68DC2 871 aa13.23□□□□□ -0.29
GCN1-206ENST00000549815 CCDC70Q6NSX1 233 aa13.23□□□□□ -0.29
GCN1-206ENST00000549815 BBS12Q6ZW61 710 aa13.23□□□□□ -0.29
GCN1-206ENST00000549815 PID1Q7Z2X4 250 aa13.23□□□□□ -0.29
GCN1-206ENST00000549815 AVL9Q8NBF6 648 aa13.23□□□□□ -0.29
GCN1-206ENST00000549815 CCDC112Q8NEF3 446 aa13.23□□□□□ -0.29
GCN1-206ENST00000549815 JPH3Q8WXH2 748 aaPredicted RBP13.23□□□□□ -0.29
GCN1-206ENST00000549815 NCSTNQ92542 709 aa13.23□□□□□ -0.29
GCN1-206ENST00000549815 EXTL1Q92935 676 aa13.23□□□□□ -0.29
GCN1-206ENST00000549815 RTP4Q96DX8 246 aa13.23□□□□□ -0.29
GCN1-206ENST00000549815 RBM41Q96IZ5 413 aaKnown RBP13.23□□□□□ -0.29
GCN1-206ENST00000549815 ANP32EQ9BTT0 268 aa13.23□□□□□ -0.29
GCN1-206ENST00000549815 ASPSCR1Q9BZE9 553 aa13.23□□□□□ -0.29
GCN1-206ENST00000549815 TRIM5Q9C035 493 aa13.23□□□□□ -0.29
GCN1-206ENST00000549815 EPB41L1Q9H4G0 881 aa13.23□□□□□ -0.29
GCN1-206ENST00000549815 IL26Q9NPH9 171 aa13.23□□□□□ -0.29
GCN1-206ENST00000549815 KLHL8Q9P2G9 620 aaPredicted RBP13.23□□□□□ -0.29
GCN1-206ENST00000549815 ZNF106Q9H2Y7 1883 aaKnown RBP13.23□□□□□ -0.29
GCN1-206ENST00000549815 RCCD1A6NED2 376 aa13.22□□□□□ -0.29
GCN1-206ENST00000549815 F5H423 210 aaPredicted RBP13.22□□□□□ -0.29
GCN1-206ENST00000549815 GAPDHSO14556 408 aaPredicted RBP13.22□□□□□ -0.29
GCN1-206ENST00000549815 RAD1O60671 282 aa13.22□□□□□ -0.29
GCN1-206ENST00000549815 CDK14O94921 469 aa13.22□□□□□ -0.29
GCN1-206ENST00000549815 ANKRD34CP0C6C1 535 aa13.22□□□□□ -0.29
GCN1-206ENST00000549815 RBL1P28749 1068 aa13.22□□□□□ -0.29
GCN1-206ENST00000549815 SPAM1P38567 509 aa13.22□□□□□ -0.29
GCN1-206ENST00000549815 GFERP55789 205 aa13.22□□□□□ -0.29
GCN1-206ENST00000549815 CYP4F2P78329 520 aa13.22□□□□□ -0.29
GCN1-206ENST00000549815 TMEM115Q12893 351 aaPredicted RBP13.22□□□□□ -0.29
GCN1-206ENST00000549815 MPP3Q13368 585 aa13.22□□□□□ -0.29
GCN1-206ENST00000549815 XRCC4Q13426 336 aa13.22□□□□□ -0.29
GCN1-206ENST00000549815 SLC1A5Q15758 541 aa13.22□□□□□ -0.29
GCN1-206ENST00000549815 SNAP47Q5SQN1 464 aa13.22□□□□□ -0.29
GCN1-206ENST00000549815 DCAF12Q5T6F0 453 aa13.22□□□□□ -0.29
GCN1-206ENST00000549815 AGAP9Q5VTM2 703 aa13.22□□□□□ -0.29
GCN1-206ENST00000549815 XKR5Q6UX68 686 aa13.22□□□□□ -0.29
GCN1-206ENST00000549815 WASH2PQ6VEQ5 465 aa13.22□□□□□ -0.29
GCN1-206ENST00000549815 TMEM26Q6ZUK4 368 aa13.22□□□□□ -0.29
GCN1-206ENST00000549815 FAM129CQ86XR2 697 aa13.22□□□□□ -0.29
GCN1-206ENST00000549815 SLC25A41Q8N5S1 370 aa13.22□□□□□ -0.29
GCN1-206ENST00000549815 TEFMQ96QE5 360 aaKnown RBP13.22□□□□□ -0.29
GCN1-206ENST00000549815 SLC12A9Q9BXP2 914 aa13.22□□□□□ -0.29
GCN1-206ENST00000549815 ZMYND15Q9H091 742 aa13.22□□□□□ -0.29
GCN1-206ENST00000549815 OSGEPL1Q9H4B0 414 aa13.22□□□□□ -0.29
GCN1-206ENST00000549815 C10orf88Q9H8K7 445 aa13.22□□□□□ -0.29
GCN1-206ENST00000549815 APMAPQ9HDC9 416 aa13.22□□□□□ -0.29
GCN1-206ENST00000549815 WASH6PQ9NQA3 447 aa13.22□□□□□ -0.29
GCN1-206ENST00000549815 FBXO8Q9NRD0 319 aa13.22□□□□□ -0.29
GCN1-206ENST00000549815 SIDT1Q9NXL6 827 aaKnown RBP13.22□□□□□ -0.29
GCN1-206ENST00000549815 PILRAQ9UKJ1 303 aa13.22□□□□□ -0.29
GCN1-206ENST00000549815 DNAJC16Q9Y2G8 782 aa13.22□□□□□ -0.29
GCN1-206ENST00000549815 SLC30A1Q9Y6M5 507 aa13.22□□□□□ -0.29
GCN1-206ENST00000549815 APOC4-APOC2K7ER74 178 aa13.21□□□□□ -0.29
GCN1-206ENST00000549815 GPR39O43194 453 aa13.21□□□□□ -0.29
GCN1-206ENST00000549815 VIPP01282 170 aa13.21□□□□□ -0.29
GCN1-206ENST00000549815 APOC2P02655 101 aa13.21□□□□□ -0.29
GCN1-206ENST00000549815 LIFP15018 202 aa13.21□□□□□ -0.29
GCN1-206ENST00000549815 ITGB6P18564 788 aa13.21□□□□□ -0.29
GCN1-206ENST00000549815 HLA-DPA1P20036 260 aa13.21□□□□□ -0.29
GCN1-206ENST00000549815 CTNNA1P35221 906 aaKnown RBP13.21□□□□□ -0.29
GCN1-206ENST00000549815 MAPK9P45984 424 aa13.21□□□□□ -0.29
GCN1-206ENST00000549815 ATP1A2P50993 1020 aa13.21□□□□□ -0.29
GCN1-206ENST00000549815 SEPT7Q16181 437 aaKnown RBP13.21□□□□□ -0.29
GCN1-206ENST00000549815 TBR1Q16650 682 aa13.21□□□□□ -0.29
GCN1-206ENST00000549815 ZDHHC20Q5W0Z9 365 aa13.21□□□□□ -0.29
GCN1-206ENST00000549815 TIPARPQ7Z3E1 657 aaKnown RBP13.21□□□□□ -0.29
GCN1-206ENST00000549815 DAAM2Q86T65 1068 aa13.21□□□□□ -0.29
GCN1-206ENST00000549815 CCDC50Q8IVM0 306 aa13.21□□□□□ -0.29
GCN1-206ENST00000549815 CACNA2D3Q8IZS8 1091 aa13.21□□□□□ -0.29
GCN1-206ENST00000549815 BRSK1Q8TDC3 778 aa13.21□□□□□ -0.29
GCN1-206ENST00000549815 C9orf72Q96LT7 481 aa13.21□□□□□ -0.29
GCN1-206ENST00000549815 CTRCQ99895 268 aa13.21□□□□□ -0.29
GCN1-206ENST00000549815 HEMGNQ9BXL5 484 aa13.21□□□□□ -0.29
GCN1-206ENST00000549815 POT1Q9NUX5 634 aa13.21□□□□□ -0.29
GCN1-206ENST00000549815 HACD3Q9P035 362 aa13.21□□□□□ -0.29
GCN1-206ENST00000549815 TRHDEQ9UKU6 1024 aa13.21□□□□□ -0.29
GCN1-206ENST00000549815 WDR37Q9Y2I8 494 aa13.21□□□□□ -0.29
GCN1-206ENST00000549815 REXO2Q9Y3B8 237 aaKnown RBP13.21□□□□□ -0.29
GCN1-206ENST00000549815 PCDHA3Q9Y5H8 950 aa13.21□□□□□ -0.29
GCN1-206ENST00000549815 TLN1Q9Y490 2541 aaKnown RBP13.2□□□□□ -0.3
GCN1-206ENST00000549815 SOWAHDA6NJG2 315 aa13.2□□□□□ -0.3
GCN1-206ENST00000549815 OR52A4PA6NMU1 304 aa13.2□□□□□ -0.3
GCN1-206ENST00000549815 BUD23O43709 281 aaKnown RBP13.2□□□□□ -0.3
GCN1-206ENST00000549815 UGT1A9O60656 530 aa13.2□□□□□ -0.3
GCN1-206ENST00000549815 UBXN7O94888 489 aa13.2□□□□□ -0.3
GCN1-206ENST00000549815 NDUFA10O95299 355 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms