RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 ZNF225Q9UK10 706 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 ANGPTL2Q9UKU9 493 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 RNF112Q9ULX5 631 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 POMPQ9Y244 141 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 CCL26Q9Y258 94 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 L3MBTL1Q9Y468 752 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 GLYATL1P3A0A0U1RQE8 302 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 PSMD11O00231 422 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 ACOT8O14734 319 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 BUD23O43709 281 aaKnown RBP9.87□□□□□ -0.83
RAB5B-206ENST00000549505 KIF1CO43896 1103 aaKnown RBP9.87□□□□□ -0.83
RAB5B-206ENST00000549505 OR1I1O60431 355 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 TBX10O75333 385 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 NPPAP01160 153 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 ENO3P13929 434 aaPredicted RBP9.87□□□□□ -0.83
RAB5B-206ENST00000549505 HNRNPLP14866 589 aaKnown RBP eCLIP9.87□□□□□ -0.83
RAB5B-206ENST00000549505 NCF2P19878 526 aaPredicted RBP9.87□□□□□ -0.83
RAB5B-206ENST00000549505 PTDSS1P48651 473 aaKnown RBP9.87□□□□□ -0.83
RAB5B-206ENST00000549505 ERVK-21P61565 698 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 SLC25A3Q00325 362 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 TEAD2Q15562 447 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 SLC5A9Q2M3M2 681 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 ZNF658BQ4V348 819 aaPredicted RBP9.87□□□□□ -0.83
RAB5B-206ENST00000549505 PDCD4Q53EL6 469 aaKnown RBP9.87□□□□□ -0.83
RAB5B-206ENST00000549505 OR2A12Q8NGT7 310 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 NRG4Q8WWG1 115 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 DLG3Q92796 817 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 SMIM14Q96QK8 99 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 SERPINI1Q99574 410 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 THTPAQ9BU02 230 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 PFDN4Q9NQP4 134 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 ERVW-1Q9UQF0 538 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 SLC4A7Q9Y6M7 1214 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 DYTNA2CJ06 578 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 NPIPB15A6NHN6 443 aaPredicted RBP9.87□□□□□ -0.83
RAB5B-206ENST00000549505 TMEM233B4DJY2 109 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 UBDO15205 165 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 CCL16O15467 120 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 WDR47O94967 919 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 PRAMEF1O95521 474 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 DGKAP23743 735 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 CA5AP35218 305 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 NSG1P42857 185 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 ZFP36L2P47974 494 aaKnown RBP9.87□□□□□ -0.83
RAB5B-206ENST00000549505 POLR2LP62875 67 aaKnown RBP9.87□□□□□ -0.83
RAB5B-206ENST00000549505 ZNF33BQ06732 778 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 SP140Q13342 867 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 TMEM25Q86YD3 366 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 ETFBKMTQ8IXQ9 262 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 NRSN1Q8IZ57 195 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 SIDT2Q8NBJ9 832 aaKnown RBP9.87□□□□□ -0.83
RAB5B-206ENST00000549505 EEF1AKMT1Q8WVE0 214 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 MOCOSQ96EN8 888 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 SLC25A23Q9BV35 468 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 HEBP1Q9NRV9 189 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 CCL27Q9Y4X3 112 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 PCDHGA7Q9Y5G6 932 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 GPR45Q9Y5Y3 372 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 CDC7O00311 574 aa9.86□□□□□ -0.83
RAB5B-206ENST00000549505 FBP2O00757 339 aa9.86□□□□□ -0.83
RAB5B-206ENST00000549505 NUAK1O60285 661 aa9.86□□□□□ -0.83
RAB5B-206ENST00000549505 NIPSNAP2O75323 286 aa9.86□□□□□ -0.83
RAB5B-206ENST00000549505 BCAS2O75934 225 aaPredicted RBP9.86□□□□□ -0.83
RAB5B-206ENST00000549505 C1SP09871 688 aa9.86□□□□□ -0.83
RAB5B-206ENST00000549505 SPATA31D3P0C874 917 aa9.86□□□□□ -0.83
RAB5B-206ENST00000549505 ATP6V1C1P21283 382 aa9.86□□□□□ -0.83
RAB5B-206ENST00000549505 PRPH2P23942 346 aa9.86□□□□□ -0.83
RAB5B-206ENST00000549505 CPA2P48052 419 aa9.86□□□□□ -0.83
RAB5B-206ENST00000549505 TBL3Q12788 808 aaKnown RBP9.86□□□□□ -0.83
RAB5B-206ENST00000549505 TGFBIQ15582 683 aa9.86□□□□□ -0.83
RAB5B-206ENST00000549505 TSNQ15631 228 aaKnown RBP9.86□□□□□ -0.83
RAB5B-206ENST00000549505 ZRANB3Q5FWF4 1079 aa9.86□□□□□ -0.83
RAB5B-206ENST00000549505 FAM117BQ6P1L5 589 aa9.86□□□□□ -0.83
RAB5B-206ENST00000549505 ZFP1Q6P2D0 407 aa9.86□□□□□ -0.83
RAB5B-206ENST00000549505 SPATA31D4Q6ZUB0 917 aa9.86□□□□□ -0.83
RAB5B-206ENST00000549505 DPPA4Q7L190 304 aa9.86□□□□□ -0.83
RAB5B-206ENST00000549505 SNX32Q86XE0 403 aa9.86□□□□□ -0.83
RAB5B-206ENST00000549505 GPSM1Q86YR5 675 aa9.86□□□□□ -0.83
RAB5B-206ENST00000549505 OR56A4Q8NGH8 313 aa9.86□□□□□ -0.83
RAB5B-206ENST00000549505 TWIST2Q8WVJ9 160 aa9.86□□□□□ -0.83
RAB5B-206ENST00000549505 TCEAL4Q96EI5 215 aa9.86□□□□□ -0.83
RAB5B-206ENST00000549505 LINGO1Q96FE5 620 aa9.86□□□□□ -0.83
RAB5B-206ENST00000549505 FAM161BQ96MY7 647 aa9.86□□□□□ -0.83
RAB5B-206ENST00000549505 NTMT1Q9BV86 223 aa9.86□□□□□ -0.83
RAB5B-206ENST00000549505 EPHX3Q9H6B9 360 aa9.86□□□□□ -0.83
RAB5B-206ENST00000549505 SPATS2LQ9NUQ6 558 aaKnown RBP9.86□□□□□ -0.83
RAB5B-206ENST00000549505 TMEM181Q9P2C4 612 aa9.86□□□□□ -0.83
RAB5B-206ENST00000549505 BCAP29Q9UHQ4 241 aa9.86□□□□□ -0.83
RAB5B-206ENST00000549505 H3BNX3 289 aa9.86□□□□□ -0.83
RAB5B-206ENST00000549505 IFRD1O00458 451 aaPredicted RBP9.86□□□□□ -0.83
RAB5B-206ENST00000549505 KRT36O76013 467 aa9.86□□□□□ -0.83
RAB5B-206ENST00000549505 ALDOCP09972 364 aaKnown RBP9.86□□□□□ -0.83
RAB5B-206ENST00000549505 ANPEPP15144 967 aa9.86□□□□□ -0.83
RAB5B-206ENST00000549505 EEF1DP29692 281 aaKnown RBP9.86□□□□□ -0.83
RAB5B-206ENST00000549505 CTSOP43234 321 aaPredicted RBP9.86□□□□□ -0.83
RAB5B-206ENST00000549505 SPINT3P49223 89 aa9.86□□□□□ -0.83
RAB5B-206ENST00000549505 AP2B1P63010 937 aa9.86□□□□□ -0.83
RAB5B-206ENST00000549505 GAB4Q2WGN9 574 aa9.86□□□□□ -0.83
RAB5B-206ENST00000549505 GGTA1PQ4G0N0 100 aa9.86□□□□□ -0.83
RAB5B-206ENST00000549505 PLEKHS1Q5SXH7 462 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms