RNA–Protein interactions for RNA: ENST00000549220.5

EFCAB2-215, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 4

Gene EFCAB2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-215ENST00000549220 CCNCP24863 283 aa5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 PMLP29590 882 aa5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 CD86P42081 329 aa5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 C21orf59P57076 290 aa5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 CLDN2P57739 230 aa5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 EIF3EP60228 445 aaKnown RBP5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 IL9RQ01113 521 aa5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 PPIDQ08752 370 aaKnown RBP5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 CCDC173Q0VFZ6 552 aa5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 TRAF2Q12933 501 aa5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 SNX1Q13596 522 aa5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 GALNT3Q14435 633 aa5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 RFTN1Q14699 578 aaPredicted RBP5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 RPS6KA1Q15418 735 aa5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 TCEA2Q15560 299 aa5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 CSRP2Q16527 193 aa5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 KCTD19Q17RG1 926 aaPredicted RBP5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 DUOXA1Q1HG43 343 aa5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 SETMARQ53H47 684 aaPredicted RBP5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 ZNF569Q5MCW4 686 aa5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 PRAMEF14Q5SWL7 426 aa5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 KDM7AQ6ZMT4 941 aa5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 PTAR1Q7Z6K3 402 aaPredicted RBP5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 JAMLQ86YT9 394 aa5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 RNF10Q8N5U6 811 aaKnown RBP5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 LPCAT1Q8NF37 534 aa5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 CADM4Q8NFZ8 388 aa5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 ACTL9Q8TC94 416 aa5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 ATG4AQ8WYN0 398 aa5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 HDAC11Q96DB2 347 aa5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 ZNF419Q96HQ0 510 aaPredicted RBP5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 LOXL4Q96JB6 756 aa5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 FEM1CQ96JP0 617 aa5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 NSMCE3Q96MG7 304 aa5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 SMIM14Q96QK8 99 aa5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 PSKH2Q96QS6 385 aa5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 NUDCD1Q96RS6 583 aa5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 RBM15Q96T37 977 aaKnown RBP eCLIP5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 MGME1Q9BQP7 344 aa5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 POLR1EQ9GZS1 481 aaKnown RBP5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 SUDS3Q9H7L9 328 aaPredicted RBP5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 EBF2Q9HAK2 575 aa5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 TM9SF3Q9HD45 589 aa5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 PCDH12Q9NPG4 1184 aa5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 KLHL8Q9P2G9 620 aaPredicted RBP5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 PILRBQ9UKJ0 227 aa5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 PYCARDQ9ULZ3 195 aa5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 ZFR2Q9UPR6 939 aaKnown RBP5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 CHKBQ9Y259 395 aa5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 ASXL3Q9C0F0 2248 aa5.89□□□□□ -1.47
EFCAB2-215ENST00000549220 PCM1Q15154 2024 aa5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 A0A1W2PPC4 97 aa5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 LNP1A1A4G5 178 aa5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 C4orf47A7E2U8 309 aa5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 ZNF487B1APH4 448 aa5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 APOC4-APOC2K7ER74 178 aa5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 SCAMP1O15126 338 aa5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 KCNN4O15554 427 aa5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 SLC7A4O43246 635 aa5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 ZSCAN12O43309 604 aa5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 CEP104O60308 925 aa5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 NOBOXO60393 691 aa5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 PMPCBO75439 489 aa5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 TJP3O95049 919 aa5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 PAK4O96013 591 aaPredicted RBP5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 MT-CYBP00156 380 aaPredicted RBP5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 APOC2P02655 101 aa5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 PCCBP05166 539 aa5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 PDHA1P08559 390 aa5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 SERPINF2P08697 491 aa5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 ALPIP09923 528 aa5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 ELFN1P0C7U0 828 aa5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 ZNF806P0C7X5 589 aa5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 PIRTP0C851 137 aa5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 RBP3P10745 1247 aa5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 PTPN3P26045 913 aa5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 CD27P26842 260 aa5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 RBL1P28749 1068 aa5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 CD38P28907 300 aa5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 HSPA9P38646 679 aaKnown RBP5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 TNNT3P45378 269 aaPredicted RBP5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 PEX5P50542 639 aa5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 TERF1P54274 439 aa5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 AP1S1P61966 158 aa5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 RPS21P63220 83 aaKnown RBP5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 NIPAL4Q0D2K0 466 aa5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 GRIK2Q13002 908 aa5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 SGCGQ13326 291 aa5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 HNRNPDQ14103 355 aaKnown RBP5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 STAT4Q14765 748 aa5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 GRM3Q14832 879 aa5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 ACOX1Q15067 660 aa5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 NOMO1Q15155 1222 aa5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 UGP2Q16851 508 aa5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 ARMC12Q5T9G4 340 aa5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 ERAP2Q6P179 960 aa5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 BBS12Q6ZW61 710 aa5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 BZW1Q7L1Q6 419 aaKnown RBP5.88□□□□□ -1.47
EFCAB2-215ENST00000549220 PID1Q7Z2X4 250 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms