RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 PARP8Q8N3A8 854 aa13.61□□□□□ -0.23
HDAC7-228ENST00000548938 CHDHQ8NE62 594 aaPredicted RBP13.61□□□□□ -0.23
HDAC7-228ENST00000548938 TSPEARQ8WU66 669 aa13.61□□□□□ -0.23
HDAC7-228ENST00000548938 SMARCD1Q96GM5 515 aa13.61□□□□□ -0.23
HDAC7-228ENST00000548938 TBATAQ96M53 351 aa13.61□□□□□ -0.23
HDAC7-228ENST00000548938 SMURF2Q9HAU4 748 aa13.61□□□□□ -0.23
HDAC7-228ENST00000548938 FLRT1Q9NZU1 646 aa13.61□□□□□ -0.23
HDAC7-228ENST00000548938 MROH6A6NGR9 719 aa13.61□□□□□ -0.23
HDAC7-228ENST00000548938 TNPO2O14787 897 aaKnown RBP13.61□□□□□ -0.23
HDAC7-228ENST00000548938 FGF10O15520 208 aaPredicted RBP13.61□□□□□ -0.23
HDAC7-228ENST00000548938 IRAK2O43187 625 aa13.61□□□□□ -0.23
HDAC7-228ENST00000548938 JRKO75564 520 aa13.61□□□□□ -0.23
HDAC7-228ENST00000548938 PAPSS2O95340 614 aaPredicted RBP13.61□□□□□ -0.23
HDAC7-228ENST00000548938 GSTT2P0CG29 244 aa13.61□□□□□ -0.23
HDAC7-228ENST00000548938 GSTT2BP0CG30 244 aa13.61□□□□□ -0.23
HDAC7-228ENST00000548938 HOXC13P31276 330 aa13.61□□□□□ -0.23
HDAC7-228ENST00000548938 MTPNP58546 118 aa13.61□□□□□ -0.23
HDAC7-228ENST00000548938 EMX2Q04743 252 aa13.61□□□□□ -0.23
HDAC7-228ENST00000548938 SEMA3AQ14563 771 aa13.61□□□□□ -0.23
HDAC7-228ENST00000548938 FXNQ16595 210 aa13.61□□□□□ -0.23
HDAC7-228ENST00000548938 ANKRD34AQ69YU3 496 aa13.61□□□□□ -0.23
HDAC7-228ENST00000548938 SPATA19Q7Z5L4 167 aa13.61□□□□□ -0.23
HDAC7-228ENST00000548938 PROSER1Q86XN7 944 aa13.61□□□□□ -0.23
HDAC7-228ENST00000548938 HS3ST5Q8IZT8 346 aa13.61□□□□□ -0.23
HDAC7-228ENST00000548938 CADM3Q8N126 398 aa13.61□□□□□ -0.23
HDAC7-228ENST00000548938 HDAC2Q92769 488 aaKnown RBP13.61□□□□□ -0.23
HDAC7-228ENST00000548938 IMP4Q96G21 291 aaKnown RBP13.61□□□□□ -0.23
HDAC7-228ENST00000548938 LRRC3Q9BY71 257 aa13.61□□□□□ -0.23
HDAC7-228ENST00000548938 CARS2Q9HA77 564 aaKnown RBP13.61□□□□□ -0.23
HDAC7-228ENST00000548938 IKZF3Q9UKT9 509 aa13.61□□□□□ -0.23
HDAC7-228ENST00000548938 MEIS3P2A8K0S8 358 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 PRSS23O95084 383 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 PEX11BO96011 259 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 IGLV3-25P01717 112 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 ENO2P09104 434 aaPredicted RBP13.6□□□□□ -0.23
HDAC7-228ENST00000548938 SLC2A3P11169 496 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 AGXTP21549 392 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 MTHFRP42898 656 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 TPD52P55327 224 aaPredicted RBP13.6□□□□□ -0.23
HDAC7-228ENST00000548938 IFITM3Q01628 133 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 OCA2Q04671 838 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 HABP4Q5JVS0 413 aaKnown RBP13.6□□□□□ -0.23
HDAC7-228ENST00000548938 C14orf80Q86SX3 495 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 RBM23Q86U06 439 aaKnown RBP13.6□□□□□ -0.23
HDAC7-228ENST00000548938 FAM86B1Q8N7N1 296 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 OR2T11Q8NH01 316 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 MYLPFQ96A32 169 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 PPM1MQ96MI6 270 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 MBOAT4Q96T53 435 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 ACOX2Q99424 681 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 AKIP1Q9NQ31 210 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 SACM1LQ9NTJ5 587 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 DNMT3BQ9UBC3 853 aaKnown RBP13.6□□□□□ -0.23
HDAC7-228ENST00000548938 ENPP5Q9UJA9 477 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 BAG5Q9UL15 447 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 PDE10AQ9Y233 779 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 PCDHB3Q9Y5E6 796 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 NOBOXO60393 691 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 VPS4BO75351 444 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 INMTO95050 263 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 CYP2C18P33260 490 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 TRIM32Q13049 653 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 CCDC92Q53HC0 331 aaPredicted RBP13.6□□□□□ -0.23
HDAC7-228ENST00000548938 SIRPB2Q5JXA9 342 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 C6orf141Q5SZD1 244 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 ZNF362Q5T0B9 420 aaPredicted RBP13.6□□□□□ -0.23
HDAC7-228ENST00000548938 RGMBQ6NW40 437 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 FBXO39Q8N4B4 442 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 SCAMP5Q8TAC9 235 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 ITFG1Q8TB96 612 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 ZFP90Q8TF47 636 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 NUDT8Q8WV74 236 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 DNAJB3Q8WWF6 145 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 MUL1Q969V5 352 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 ISG20Q96AZ6 181 aaKnown RBP13.6□□□□□ -0.23
HDAC7-228ENST00000548938 CCDC138Q96M89 665 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 SLX1AQ9BQ83 275 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 AMBRA1Q9C0C7 1298 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 NOL6Q9H6R4 1146 aaKnown RBP13.6□□□□□ -0.23
HDAC7-228ENST00000548938 HMG20AQ9NP66 347 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 PCDH12Q9NPG4 1184 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 FAM118AQ9NWS6 357 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 SUN2Q9UH99 717 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 MAGEL2Q9UJ55 1249 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 NUDT5Q9UKK9 219 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 PTCH2Q9Y6C5 1203 aa13.6□□□□□ -0.23
HDAC7-228ENST00000548938 TYW5A2RUC4 315 aaKnown RBP13.59□□□□□ -0.23
HDAC7-228ENST00000548938 J3KR12 359 aa13.59□□□□□ -0.23
HDAC7-228ENST00000548938 LDB2O43679 373 aa13.59□□□□□ -0.23
HDAC7-228ENST00000548938 MAN1A2O60476 641 aa13.59□□□□□ -0.23
HDAC7-228ENST00000548938 MMP2P08253 660 aa13.59□□□□□ -0.23
HDAC7-228ENST00000548938 PGFP49763 221 aa13.59□□□□□ -0.23
HDAC7-228ENST00000548938 AFF1P51825 1210 aaKnown RBP13.59□□□□□ -0.23
HDAC7-228ENST00000548938 GP2P55259 537 aaKnown RBP13.59□□□□□ -0.23
HDAC7-228ENST00000548938 SLC10A7Q0GE19 358 aa13.59□□□□□ -0.23
HDAC7-228ENST00000548938 CTF1Q16619 201 aa13.59□□□□□ -0.23
HDAC7-228ENST00000548938 CCL14Q16627 93 aa13.59□□□□□ -0.23
HDAC7-228ENST00000548938 PLA2G4EQ3MJ16 856 aa13.59□□□□□ -0.23
HDAC7-228ENST00000548938 AFMIDQ63HM1 303 aa13.59□□□□□ -0.23
HDAC7-228ENST00000548938 LAIR2Q6ISS4 152 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms