RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 TSPY26PQ9H489 355 aa17.14■□□□□ 0.33
CHMP1A-205ENST00000548650 APMAPQ9HDC9 416 aa17.14■□□□□ 0.33
CHMP1A-205ENST00000548650 ZNF624Q9P2J8 865 aaPredicted RBP17.14■□□□□ 0.33
CHMP1A-205ENST00000548650 KLHL3Q9UH77 587 aa17.14■□□□□ 0.33
CHMP1A-205ENST00000548650 KMOO15229 486 aa17.13■□□□□ 0.33
CHMP1A-205ENST00000548650 VEGFDO43915 354 aa17.13■□□□□ 0.33
CHMP1A-205ENST00000548650 CST8O60676 142 aa17.13■□□□□ 0.33
CHMP1A-205ENST00000548650 C9P02748 559 aa17.13■□□□□ 0.33
CHMP1A-205ENST00000548650 BRAFP15056 766 aa17.13■□□□□ 0.33
CHMP1A-205ENST00000548650 ZNF7P17097 686 aaPredicted RBP17.13■□□□□ 0.33
CHMP1A-205ENST00000548650 XRCC1P18887 633 aaPredicted RBP17.13■□□□□ 0.33
CHMP1A-205ENST00000548650 MARCKSL1P49006 195 aa17.13■□□□□ 0.33
CHMP1A-205ENST00000548650 WNT3AP56704 352 aa17.13■□□□□ 0.33
CHMP1A-205ENST00000548650 TBX2Q13207 712 aaPredicted RBP17.13■□□□□ 0.33
CHMP1A-205ENST00000548650 TFDP2Q14188 446 aa17.13■□□□□ 0.33
CHMP1A-205ENST00000548650 LLGL1Q15334 1064 aa17.13■□□□□ 0.33
CHMP1A-205ENST00000548650 SEPT7Q16181 437 aaKnown RBP17.13■□□□□ 0.33
CHMP1A-205ENST00000548650 SKOR2Q2VWA4 1001 aaPredicted RBP17.13■□□□□ 0.33
CHMP1A-205ENST00000548650 ATP13A5Q4VNC0 1218 aa17.13■□□□□ 0.33
CHMP1A-205ENST00000548650 TMEM26Q6ZUK4 368 aa17.13■□□□□ 0.33
CHMP1A-205ENST00000548650 PRICKLE2Q7Z3G6 844 aa17.13■□□□□ 0.33
CHMP1A-205ENST00000548650 C11orf96Q7Z7L8 435 aa17.13■□□□□ 0.33
CHMP1A-205ENST00000548650 TTC30BQ8N4P2 665 aa17.13■□□□□ 0.33
CHMP1A-205ENST00000548650 ANP32EQ9BTT0 268 aa17.13■□□□□ 0.33
CHMP1A-205ENST00000548650 FBXO8Q9NRD0 319 aa17.13■□□□□ 0.33
CHMP1A-205ENST00000548650 FAM153AQ9UHL3 310 aa17.13■□□□□ 0.33
CHMP1A-205ENST00000548650 DNAJC16Q9Y2G8 782 aa17.13■□□□□ 0.33
CHMP1A-205ENST00000548650 hCG_1818297A0A087WSY0 165 aa17.12■□□□□ 0.33
CHMP1A-205ENST00000548650 LOC285095A0A1B0GVY8 99 aa17.12■□□□□ 0.33
CHMP1A-205ENST00000548650 PDZK1P1A8MUH7 402 aa17.12■□□□□ 0.33
CHMP1A-205ENST00000548650 HMGCLP35914 325 aa17.12■□□□□ 0.33
CHMP1A-205ENST00000548650 SLC19A1P41440 591 aa17.12■□□□□ 0.33
CHMP1A-205ENST00000548650 CHRNA4P43681 627 aa17.12■□□□□ 0.33
CHMP1A-205ENST00000548650 NFKB2Q00653 900 aa17.12■□□□□ 0.33
CHMP1A-205ENST00000548650 TFDP3Q5H9I0 405 aa17.12■□□□□ 0.33
CHMP1A-205ENST00000548650 KAZNQ674X7 775 aa17.12■□□□□ 0.33
CHMP1A-205ENST00000548650 CCDC70Q6NSX1 233 aa17.12■□□□□ 0.33
CHMP1A-205ENST00000548650 CEACAM20Q6UY09 585 aa17.12■□□□□ 0.33
CHMP1A-205ENST00000548650 BZW1Q7L1Q6 419 aaKnown RBP17.12■□□□□ 0.33
CHMP1A-205ENST00000548650 TIPARPQ7Z3E1 657 aaKnown RBP17.12■□□□□ 0.33
CHMP1A-205ENST00000548650 PLXDC1Q8IUK5 500 aa17.12■□□□□ 0.33
CHMP1A-205ENST00000548650 TRIM48Q8IWZ4 208 aa17.12■□□□□ 0.33
CHMP1A-205ENST00000548650 NLGN4XQ8N0W4 816 aa17.12■□□□□ 0.33
CHMP1A-205ENST00000548650 NLGN4YQ8NFZ3 816 aaPredicted RBP17.12■□□□□ 0.33
CHMP1A-205ENST00000548650 OXNAD1Q96HP4 312 aaPredicted RBP17.12■□□□□ 0.33
CHMP1A-205ENST00000548650 MRGPRX2Q96LB1 330 aa17.12■□□□□ 0.33
CHMP1A-205ENST00000548650 QKIQ96PU8 341 aaKnown RBP eCLIP17.12■□□□□ 0.33
CHMP1A-205ENST00000548650 ZPBPQ9BS86 351 aa17.12■□□□□ 0.33
CHMP1A-205ENST00000548650 FAM117AQ9C073 453 aa17.12■□□□□ 0.33
CHMP1A-205ENST00000548650 BPIFA1Q9NP55 256 aa17.12■□□□□ 0.33
CHMP1A-205ENST00000548650 POT1Q9NUX5 634 aa17.12■□□□□ 0.33
CHMP1A-205ENST00000548650 KLHL8Q9P2G9 620 aaPredicted RBP17.12■□□□□ 0.33
CHMP1A-205ENST00000548650 TMEM184BQ9Y519 407 aaPredicted RBP17.12■□□□□ 0.33
CHMP1A-205ENST00000548650 SLC30A1Q9Y6M5 507 aa17.12■□□□□ 0.33
CHMP1A-205ENST00000548650 AKR1B15C9JRZ8 316 aaPredicted RBP17.11■□□□□ 0.33
CHMP1A-205ENST00000548650 F5H423 210 aaPredicted RBP17.11■□□□□ 0.33
CHMP1A-205ENST00000548650 GPR39O43194 453 aa17.11■□□□□ 0.33
CHMP1A-205ENST00000548650 MTSS1O43312 755 aa17.11■□□□□ 0.33
CHMP1A-205ENST00000548650 STK17BO94768 372 aa17.11■□□□□ 0.33
CHMP1A-205ENST00000548650 CDK14O94921 469 aa17.11■□□□□ 0.33
CHMP1A-205ENST00000548650 DLGAP3O95886 979 aa17.11■□□□□ 0.33
CHMP1A-205ENST00000548650 VIPP01282 170 aa17.11■□□□□ 0.33
CHMP1A-205ENST00000548650 CAPZBP47756 277 aa17.11■□□□□ 0.33
CHMP1A-205ENST00000548650 SIRPB2Q5JXA9 342 aa17.11■□□□□ 0.33
CHMP1A-205ENST00000548650 AGAP9Q5VTM2 703 aa17.11■□□□□ 0.33
CHMP1A-205ENST00000548650 ABRAXAS1Q6UWZ7 409 aa17.11■□□□□ 0.33
CHMP1A-205ENST00000548650 ZC3H18Q86VM9 953 aaKnown RBP17.11■□□□□ 0.33
CHMP1A-205ENST00000548650 KATNAL2Q8IYT4 538 aa17.11■□□□□ 0.33
CHMP1A-205ENST00000548650 ZNF567Q8N184 647 aa17.11■□□□□ 0.33
CHMP1A-205ENST00000548650 RSC1A1Q92681 617 aa17.11■□□□□ 0.33
CHMP1A-205ENST00000548650 HAUS1Q96CS2 278 aa17.11■□□□□ 0.33
CHMP1A-205ENST00000548650 SLC45A3Q96JT2 553 aa17.11■□□□□ 0.33
CHMP1A-205ENST00000548650 C9orf72Q96LT7 481 aa17.11■□□□□ 0.33
CHMP1A-205ENST00000548650 TRABDQ9H4I3 376 aa17.11■□□□□ 0.33
CHMP1A-205ENST00000548650 IL26Q9NPH9 171 aa17.11■□□□□ 0.33
CHMP1A-205ENST00000548650 GEMIN8Q9NWZ8 242 aaKnown RBP17.11■□□□□ 0.33
CHMP1A-205ENST00000548650 HEMK1Q9Y5R4 338 aaPredicted RBP17.11■□□□□ 0.33
CHMP1A-205ENST00000548650 ALG6Q9Y672 507 aa17.11■□□□□ 0.33
CHMP1A-205ENST00000548650 LOC101059948A0A1B0GTJ6 334 aa17.1■□□□□ 0.33
CHMP1A-205ENST00000548650 OR52A4PA6NMU1 304 aa17.1■□□□□ 0.33
CHMP1A-205ENST00000548650 ZNF891A8MT65 544 aaPredicted RBP17.1■□□□□ 0.33
CHMP1A-205ENST00000548650 UBXN7O94888 489 aa17.1■□□□□ 0.33
CHMP1A-205ENST00000548650 EPOP01588 193 aa17.1■□□□□ 0.33
CHMP1A-205ENST00000548650 SFTPCP11686 197 aa17.1■□□□□ 0.33
CHMP1A-205ENST00000548650 TYRP1P17643 537 aa17.1■□□□□ 0.33
CHMP1A-205ENST00000548650 RPL10P27635 214 aaKnown RBP17.1■□□□□ 0.33
CHMP1A-205ENST00000548650 SPAM1P38567 509 aa17.1■□□□□ 0.33
CHMP1A-205ENST00000548650 LEPRP48357 1165 aaKnown RBP17.1■□□□□ 0.33
CHMP1A-205ENST00000548650 DRG2P55039 364 aaKnown RBP17.1■□□□□ 0.33
CHMP1A-205ENST00000548650 GPR18Q14330 331 aa17.1■□□□□ 0.33
CHMP1A-205ENST00000548650 C11orf63Q6NUN7 778 aa17.1■□□□□ 0.33
CHMP1A-205ENST00000548650 BORAQ6PGQ7 559 aa17.1■□□□□ 0.33
CHMP1A-205ENST00000548650 WASH2PQ6VEQ5 465 aa17.1■□□□□ 0.33
CHMP1A-205ENST00000548650 TRAPPC5Q8IUR0 188 aa17.1■□□□□ 0.33
CHMP1A-205ENST00000548650 TC2NQ8N9U0 490 aa17.1■□□□□ 0.33
CHMP1A-205ENST00000548650 DTX3LQ8TDB6 740 aa17.1■□□□□ 0.33
CHMP1A-205ENST00000548650 P3H4Q92791 437 aa17.1■□□□□ 0.33
CHMP1A-205ENST00000548650 FCRL5Q96RD9 977 aa17.1■□□□□ 0.33
CHMP1A-205ENST00000548650 VAT1Q99536 393 aa17.1■□□□□ 0.33
CHMP1A-205ENST00000548650 GPN2Q9H9Y4 310 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms