RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 HTR6P50406 440 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 RPL38P63173 70 aaKnown RBP14.54□□□□□ -0.08
HOXC11-202ENST00000546378 NFATC3Q12968 1075 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 CYP27C1Q4G0S4 372 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 DCDC5Q6ZRR9 648 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 PAGE2Q7Z2X7 111 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 TICAM1Q8IUC6 712 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 ZDHHC17Q8IUH5 632 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 CLYBLQ8N0X4 340 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 CENPIQ92674 756 aaPredicted RBP14.54□□□□□ -0.08
HOXC11-202ENST00000546378 CENPNQ96H22 339 aaPredicted RBP14.54□□□□□ -0.08
HOXC11-202ENST00000546378 TRIM15Q9C019 465 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 HIPK3Q9H422 1215 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 TOR3AQ9H497 397 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 DDX28Q9NUL7 540 aaKnown RBP14.54□□□□□ -0.08
HOXC11-202ENST00000546378 hCG_2039718K7EN88 272 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 SEPT4O43236 478 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 H2AFYO75367 372 aaKnown RBP14.54□□□□□ -0.08
HOXC11-202ENST00000546378 RECQL5O94762 991 aaPredicted RBP14.54□□□□□ -0.08
HOXC11-202ENST00000546378 FKBP9O95302 570 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 ATXN8OSP0DMR3 200 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 CHRNB3Q05901 458 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 UGT3A2Q3SY77 523 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 FKBP9P1Q75LS8 142 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 IGFN1Q86VF2 1251 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 SLC30A3Q99726 388 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 TDRD1Q9BXT4 1180 aaKnown RBP14.54□□□□□ -0.08
HOXC11-202ENST00000546378 NDEL1Q9GZM8 345 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 GSTO2Q9H4Y5 243 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.54□□□□□ -0.08
HOXC11-202ENST00000546378 PCDHB3Q9Y5E6 796 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 DNMT3AQ9Y6K1 912 aaPredicted RBP14.54□□□□□ -0.08
HOXC11-202ENST00000546378 SMIM35A0A1B0GVV1 85 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 CCDC162PA2VCL2 907 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 H0Y626 953 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 M0R129 80 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 TRIM16O95361 564 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 CD4P01730 458 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 RBP1P09455 135 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 PRKAA2P54646 552 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 PAFAH1B3Q15102 231 aaKnown RBP14.53□□□□□ -0.08
HOXC11-202ENST00000546378 ANKRD26P1Q6NSI1 321 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 DET1Q7L5Y6 550 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 ZDHHC13Q8IUH4 622 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 BBS5Q8N3I7 341 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 BORCS5Q969J3 196 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 NRBF2Q96F24 287 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 TUBB1Q9H4B7 451 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 ANKRD6Q9Y2G4 727 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 TBC1D30Q9Y2I9 924 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 KIAA0100Q14667 2235 aaKnown RBP14.53□□□□□ -0.08
HOXC11-202ENST00000546378 COL1A2P08123 1366 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 PNMA8CA0A1B0GUJ8 204 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 MAGEB16A2A368 324 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 CYBAP13498 195 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 JAK1P23458 1154 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 NR4A2P43354 598 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 BCAP31P51572 246 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 GEMP55040 296 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 NCS1P62166 190 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 C16orf59Q7L2K0 433 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 ISCA2Q86U28 154 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 LINC01465Q8N7H1 131 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 ZFP90Q8TF47 636 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 SEPT8Q92599 483 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 DNAI2Q9GZS0 605 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 SIAEQ9HAT2 523 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 FAIMQ9NVQ4 179 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 A0A0G2JMZ2 1700 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 A0A1W2PQH9 124 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 TTC36A6NLP5 189 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 CHEK2O96017 543 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 BMP1P13497 986 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 CTPS1P17812 591 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 PIGAP37287 484 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 CAPGP40121 348 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 VEGFBP49765 207 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 UBE3AQ05086 875 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 SLC39A12Q504Y0 691 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 TIGD5Q53EQ6 642 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 ZNF678Q5SXM1 525 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 MFSD4BQ5TF39 518 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 TMEM53Q6P2H8 277 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 UNC93AQ86WB7 457 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 CPSF7Q8N684 471 aaKnown RBP14.53□□□□□ -0.08
HOXC11-202ENST00000546378 OR4K2Q8NGD2 314 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 DACH2Q96NX9 599 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 NANOGQ9H9S0 305 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 TRHDEQ9UKU6 1024 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 ST3GAL5Q9UNP4 418 aa14.53□□□□□ -0.08
HOXC11-202ENST00000546378 CAB39Q9Y376 341 aaPredicted RBP14.53□□□□□ -0.08
HOXC11-202ENST00000546378 GPR182O15218 404 aa14.52□□□□□ -0.08
HOXC11-202ENST00000546378 TBX1O43435 398 aa14.52□□□□□ -0.08
HOXC11-202ENST00000546378 DFNA5O60443 496 aa14.52□□□□□ -0.08
HOXC11-202ENST00000546378 NTRK1P04629 796 aa14.52□□□□□ -0.08
HOXC11-202ENST00000546378 GSTT2P0CG29 244 aa14.52□□□□□ -0.08
HOXC11-202ENST00000546378 GSTT2BP0CG30 244 aa14.52□□□□□ -0.08
HOXC11-202ENST00000546378 OR1E1P30953 314 aa14.52□□□□□ -0.08
HOXC11-202ENST00000546378 STXBP5Q5T5C0 1151 aa14.52□□□□□ -0.08
HOXC11-202ENST00000546378 ADGRG5Q8IZF4 528 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms