RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 PIH1D2Q8WWB5 315 aa12.42□□□□□ -0.42
COL4A6-209ENST00000545689 UPF1Q92900 1129 aaKnown RBP eCLIP12.42□□□□□ -0.42
COL4A6-209ENST00000545689 INTS7Q9NVH2 962 aaKnown RBP12.42□□□□□ -0.42
COL4A6-209ENST00000545689 ECDO95905 644 aaPredicted RBP12.42□□□□□ -0.42
COL4A6-209ENST00000545689 IL1BP01584 269 aa12.42□□□□□ -0.42
COL4A6-209ENST00000545689 PRKAR1AP10644 381 aa12.42□□□□□ -0.42
COL4A6-209ENST00000545689 VWA5B1Q5TIE3 1220 aa12.42□□□□□ -0.42
COL4A6-209ENST00000545689 PRR23BQ6ZRT6 265 aa12.42□□□□□ -0.42
COL4A6-209ENST00000545689 MOB2Q70IA6 237 aa12.42□□□□□ -0.42
COL4A6-209ENST00000545689 OXSMQ9NWU1 459 aa12.42□□□□□ -0.42
COL4A6-209ENST00000545689 NDOR1Q9UHB4 597 aa12.42□□□□□ -0.42
COL4A6-209ENST00000545689 ZNF541Q9H0D2 1346 aa12.42□□□□□ -0.42
COL4A6-209ENST00000545689 TOPAZ1Q8N9V7 1692 aa12.42□□□□□ -0.42
COL4A6-209ENST00000545689 ADAMDEC1O15204 470 aa12.42□□□□□ -0.42
COL4A6-209ENST00000545689 PRAMEF1O95521 474 aa12.42□□□□□ -0.42
COL4A6-209ENST00000545689 PRNPP04156 253 aa12.42□□□□□ -0.42
COL4A6-209ENST00000545689 ENO2P09104 434 aaPredicted RBP12.42□□□□□ -0.42
COL4A6-209ENST00000545689 LPIN1Q14693 890 aa12.42□□□□□ -0.42
COL4A6-209ENST00000545689 KHDC1Q4VXA5 237 aaKnown RBP12.42□□□□□ -0.42
COL4A6-209ENST00000545689 DEF8Q6ZN54 512 aa12.42□□□□□ -0.42
COL4A6-209ENST00000545689 SPATA22Q8NHS9 363 aa12.42□□□□□ -0.42
COL4A6-209ENST00000545689 FAM81AQ8TBF8 368 aa12.42□□□□□ -0.42
COL4A6-209ENST00000545689 APOLD1Q96LR9 279 aa12.42□□□□□ -0.42
COL4A6-209ENST00000545689 H3BM21 787 aa12.42□□□□□ -0.42
COL4A6-209ENST00000545689 HAT1O14929 419 aa12.42□□□□□ -0.42
COL4A6-209ENST00000545689 OR10H2O60403 315 aa12.42□□□□□ -0.42
COL4A6-209ENST00000545689 TRMUO75648 421 aaKnown RBP12.42□□□□□ -0.42
COL4A6-209ENST00000545689 SPATS1Q496A3 300 aa12.42□□□□□ -0.42
COL4A6-209ENST00000545689 ISLR2Q6UXK2 745 aa12.42□□□□□ -0.42
COL4A6-209ENST00000545689 NPAS4Q8IUM7 802 aa12.42□□□□□ -0.42
COL4A6-209ENST00000545689 PACRGLQ8N7B6 248 aa12.42□□□□□ -0.42
COL4A6-209ENST00000545689 PSMA8Q8TAA3 256 aa12.42□□□□□ -0.42
COL4A6-209ENST00000545689 GPR152Q8TDT2 470 aa12.42□□□□□ -0.42
COL4A6-209ENST00000545689 MFSD1Q9H3U5 465 aa12.42□□□□□ -0.42
COL4A6-209ENST00000545689 PDP1Q9P0J1 537 aaPredicted RBP12.42□□□□□ -0.42
COL4A6-209ENST00000545689 FAM234BA2RU67 622 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 UNCXA6NJT0 531 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 ZNF24P17028 368 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 TAS2R41P59536 307 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 TEAD4Q15561 434 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 PYDC2Q56P42 97 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 NCBP2-AS2Q69YL0 99 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 CWF19L1Q69YN2 538 aaKnown RBP12.41□□□□□ -0.42
COL4A6-209ENST00000545689 TIFABQ6ZNK6 161 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 PHYKPLQ8IUZ5 450 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 CYP4X1Q8N118 509 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 TTLL2Q9BWV7 592 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 TRIM8Q9BZR9 551 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 C10orf71Q711Q0 1435 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 AQP12BA6NM10 295 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 NADKO95544 446 aaPredicted RBP12.41□□□□□ -0.42
COL4A6-209ENST00000545689 POP4O95707 220 aaKnown RBP12.41□□□□□ -0.42
COL4A6-209ENST00000545689 SLC1A2P43004 574 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 CA9Q16790 459 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 MED27Q6P2C8 311 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 FUT10Q6P4F1 479 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 AQP12AQ8IXF9 295 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 C1orf21Q9H246 121 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 ABCB10Q9NRK6 738 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 PLK2Q9NYY3 685 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 GTF2IRD1Q9UHL9 959 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 POMPQ9Y244 141 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 IMPDH1P20839 514 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 WDR4P57081 412 aaKnown RBP12.41□□□□□ -0.42
COL4A6-209ENST00000545689 ACTR3P61158 418 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 SLCO6A1Q86UG4 719 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 C11orf65Q8NCR3 313 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 PPM1MQ96MI6 270 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 MRPS33Q9Y291 106 aaKnown RBP12.41□□□□□ -0.42
COL4A6-209ENST00000545689 Q9Y3F1 56 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 IRAK2O43187 625 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 NDUFB5O43674 189 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 CDH3P22223 829 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 RPIAP49247 311 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 SRSF11Q05519 484 aaKnown RBP12.41□□□□□ -0.42
COL4A6-209ENST00000545689 SOWAHAQ2M3V2 549 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 C6orf52Q5T4I8 152 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 CLEC6AQ6EIG7 209 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 CPA6Q8N4T0 437 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 PPP1R13LQ8WUF5 828 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 TSSK3Q96PN8 268 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 PHPT1Q9NRX4 125 aaPredicted RBP12.41□□□□□ -0.42
COL4A6-209ENST00000545689 ARFGEF2Q9Y6D5 1785 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 UBE2QL1A1L167 161 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 NEDD8-MDP1E9PL57 170 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 PIP5K1BO14986 540 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 BUD31P41223 144 aaPredicted RBP12.41□□□□□ -0.42
COL4A6-209ENST00000545689 CCR4P51679 360 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 ACLYP53396 1101 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 HERVK_113P63132 956 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 SLC25A11Q02978 314 aaKnown RBP12.41□□□□□ -0.42
COL4A6-209ENST00000545689 FOXM1Q08050 763 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 SLC9A4Q6AI14 798 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 ZNF554Q86TJ5 538 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 ATAD1Q8NBU5 361 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 ERVK-6Q9BXR3 956 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 C12orf65Q9H3J6 166 aaKnown RBP12.41□□□□□ -0.42
COL4A6-209ENST00000545689 TOR4AQ9NXH8 423 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 PTTG2Q9NZH5 202 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 AKAP7Q9P0M2 348 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms