RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 ECHDC3Q96DC8 303 aa16.89■□□□□ 0.29
PTPRO-209ENST00000543886 PDLIM5Q96HC4 596 aaKnown RBP16.89■□□□□ 0.29
PTPRO-209ENST00000543886 C3orf30Q96M34 536 aa16.89■□□□□ 0.29
PTPRO-209ENST00000543886 KCNA7Q96RP8 456 aa16.89■□□□□ 0.29
PTPRO-209ENST00000543886 C17orf80Q9BSJ5 609 aa16.89■□□□□ 0.29
PTPRO-209ENST00000543886 BOCQ9BWV1 1114 aa16.89■□□□□ 0.29
PTPRO-209ENST00000543886 CPEB1Q9BZB8 566 aaKnown RBP16.89■□□□□ 0.29
PTPRO-209ENST00000543886 NUDT4Q9NZJ9 180 aa16.89■□□□□ 0.29
PTPRO-209ENST00000543886 TSR3Q9UJK0 312 aaKnown RBP16.89■□□□□ 0.29
PTPRO-209ENST00000543886 PCTPQ9UKL6 214 aa16.89■□□□□ 0.29
PTPRO-209ENST00000543886 TRBV5-4A0A0C4DH59 114 aa16.88■□□□□ 0.29
PTPRO-209ENST00000543886 SOBPA7XYQ1 873 aa16.88■□□□□ 0.29
PTPRO-209ENST00000543886 GIPC1O14908 333 aa16.88■□□□□ 0.29
PTPRO-209ENST00000543886 S100BP04271 92 aaPredicted RBP16.88■□□□□ 0.29
PTPRO-209ENST00000543886 HNRNPA1P09651 372 aaKnown RBP eCLIP16.88■□□□□ 0.29
PTPRO-209ENST00000543886 HSPA8P11142 646 aaKnown RBP16.88■□□□□ 0.29
PTPRO-209ENST00000543886 ITGB6P18564 788 aa16.88■□□□□ 0.29
PTPRO-209ENST00000543886 UGT1A6P19224 532 aa16.88■□□□□ 0.29
PTPRO-209ENST00000543886 UGT1A1P22309 533 aa16.88■□□□□ 0.29
PTPRO-209ENST00000543886 UGT1A4P22310 534 aa16.88■□□□□ 0.29
PTPRO-209ENST00000543886 UGT1A3P35503 534 aa16.88■□□□□ 0.29
PTPRO-209ENST00000543886 UGT1A5P35504 534 aa16.88■□□□□ 0.29
PTPRO-209ENST00000543886 RGS4P49798 205 aa16.88■□□□□ 0.29
PTPRO-209ENST00000543886 ATP4BP51164 291 aa16.88■□□□□ 0.29
PTPRO-209ENST00000543886 PTPN5P54829 565 aa16.88■□□□□ 0.29
PTPRO-209ENST00000543886 FOXA1P55317 472 aa16.88■□□□□ 0.29
PTPRO-209ENST00000543886 STX5Q13190 355 aa16.88■□□□□ 0.29
PTPRO-209ENST00000543886 DMC1Q14565 340 aa16.88■□□□□ 0.29
PTPRO-209ENST00000543886 ZNF77Q15935 545 aa16.88■□□□□ 0.29
PTPRO-209ENST00000543886 LRRC66Q68CR7 880 aa16.88■□□□□ 0.29
PTPRO-209ENST00000543886 DPY19L3Q6ZPD9 716 aa16.88■□□□□ 0.29
PTPRO-209ENST00000543886 ADAMTSL2Q86TH1 951 aa16.88■□□□□ 0.29
PTPRO-209ENST00000543886 PPFIBP2Q8ND30 876 aa16.88■□□□□ 0.29
PTPRO-209ENST00000543886 SLC26A7Q8TE54 656 aa16.88■□□□□ 0.29
PTPRO-209ENST00000543886 HERVK_113Q902F9 699 aa16.88■□□□□ 0.29
PTPRO-209ENST00000543886 SCRN2Q96FV2 425 aa16.88■□□□□ 0.29
PTPRO-209ENST00000543886 ZNF641Q96N77 438 aaPredicted RBP16.88■□□□□ 0.29
PTPRO-209ENST00000543886 ZNF570Q96NI8 536 aa16.88■□□□□ 0.29
PTPRO-209ENST00000543886 NPAS2Q99743 824 aa16.88■□□□□ 0.29
PTPRO-209ENST00000543886 AKTIPQ9H8T0 292 aa16.88■□□□□ 0.29
PTPRO-209ENST00000543886 LRRC42Q9Y546 428 aa16.88■□□□□ 0.29
PTPRO-209ENST00000543886 MYOFQ9NZM1 2061 aa16.87■□□□□ 0.29
PTPRO-209ENST00000543886 CFLARO15519 480 aa16.87■□□□□ 0.29
PTPRO-209ENST00000543886 UGT2B4P06133 528 aa16.87■□□□□ 0.29
PTPRO-209ENST00000543886 HK3P52790 923 aa16.87■□□□□ 0.29
PTPRO-209ENST00000543886 NTHL1P78549 312 aa16.87■□□□□ 0.29
PTPRO-209ENST00000543886 SEMG2Q02383 582 aa16.87■□□□□ 0.29
PTPRO-209ENST00000543886 CCNIQ14094 377 aa16.87■□□□□ 0.29
PTPRO-209ENST00000543886 TGFBIQ15582 683 aa16.87■□□□□ 0.29
PTPRO-209ENST00000543886 MMEL1Q495T6 779 aa16.87■□□□□ 0.29
PTPRO-209ENST00000543886 EFL1Q7Z2Z2 1120 aaKnown RBP16.87■□□□□ 0.29
PTPRO-209ENST00000543886 OR56A4Q8NGH8 313 aa16.87■□□□□ 0.29
PTPRO-209ENST00000543886 NRG4Q8WWG1 115 aa16.87■□□□□ 0.29
PTPRO-209ENST00000543886 CCDC97Q96F63 343 aaPredicted RBP16.87■□□□□ 0.29
PTPRO-209ENST00000543886 CDRT15Q96T59 188 aa16.87■□□□□ 0.29
PTPRO-209ENST00000543886 HGH1Q9BTY7 390 aa16.87■□□□□ 0.29
PTPRO-209ENST00000543886 LINC00597Q9H2U6 94 aa16.87■□□□□ 0.29
PTPRO-209ENST00000543886 S100A14Q9HCY8 104 aa16.87■□□□□ 0.29
PTPRO-209ENST00000543886 NMRK1Q9NWW6 199 aa16.87■□□□□ 0.29
PTPRO-209ENST00000543886 UTP6Q9NYH9 597 aaKnown RBP16.87■□□□□ 0.29
PTPRO-209ENST00000543886 CCDC167Q9P0B6 97 aa16.87■□□□□ 0.29
PTPRO-209ENST00000543886 EIF2B4Q9UI10 523 aaKnown RBP16.87■□□□□ 0.29
PTPRO-209ENST00000543886 SLCO3A1Q9UIG8 710 aa16.87■□□□□ 0.29
PTPRO-209ENST00000543886 LINC01553A4QN01 128 aa16.87■□□□□ 0.29
PTPRO-209ENST00000543886 SLC25A14O95258 325 aaPredicted RBP16.87■□□□□ 0.29
PTPRO-209ENST00000543886 TRIM16O95361 564 aa16.87■□□□□ 0.29
PTPRO-209ENST00000543886 BAG2O95816 211 aa16.87■□□□□ 0.29
PTPRO-209ENST00000543886 CHEK2O96017 543 aa16.87■□□□□ 0.29
PTPRO-209ENST00000543886 CHRM1P11229 460 aaPredicted RBP16.87■□□□□ 0.29
PTPRO-209ENST00000543886 CA5AP35218 305 aa16.87■□□□□ 0.29
PTPRO-209ENST00000543886 IRS1P35568 1242 aa16.87■□□□□ 0.29
PTPRO-209ENST00000543886 RECQLP46063 649 aaPredicted RBP16.87■□□□□ 0.29
PTPRO-209ENST00000543886 PTK2BQ14289 1009 aa16.87■□□□□ 0.29
PTPRO-209ENST00000543886 KIF19Q2TAC6 998 aa16.87■□□□□ 0.29
PTPRO-209ENST00000543886 LY6G5CQ5SRR4 150 aa16.87■□□□□ 0.29
PTPRO-209ENST00000543886 Q6ZVU0 165 aa16.87■□□□□ 0.29
PTPRO-209ENST00000543886 MYO1HQ8N1T3 1032 aa16.87■□□□□ 0.29
PTPRO-209ENST00000543886 NXPE1Q8N323 547 aa16.87■□□□□ 0.29
PTPRO-209ENST00000543886 DNAJC9Q8WXX5 260 aa16.87■□□□□ 0.29
PTPRO-209ENST00000543886 HTATIP2Q9BUP3 242 aa16.87■□□□□ 0.29
PTPRO-209ENST00000543886 PTGDR2Q9Y5Y4 395 aa16.87■□□□□ 0.29
PTPRO-209ENST00000543886 PRSS21Q9Y6M0 314 aa16.87■□□□□ 0.29
PTPRO-209ENST00000543886 A0A1W2PQ67 120 aa16.86■□□□□ 0.29
PTPRO-209ENST00000543886 VPS4BO75351 444 aa16.86■□□□□ 0.29
PTPRO-209ENST00000543886 ESRRBO95718 433 aa16.86■□□□□ 0.29
PTPRO-209ENST00000543886 SNRPB2P08579 225 aaKnown RBP16.86■□□□□ 0.29
PTPRO-209ENST00000543886 DGKAP23743 735 aa16.86■□□□□ 0.29
PTPRO-209ENST00000543886 PRSS36Q5K4E3 855 aa16.86■□□□□ 0.29
PTPRO-209ENST00000543886 ZNF697Q5TEC3 545 aa16.86■□□□□ 0.29
PTPRO-209ENST00000543886 GRASPQ7Z6J2 395 aaPredicted RBP16.86■□□□□ 0.29
PTPRO-209ENST00000543886 CLDN19Q8N6F1 224 aa16.86■□□□□ 0.29
PTPRO-209ENST00000543886 GPR26Q8NDV2 337 aa16.86■□□□□ 0.29
PTPRO-209ENST00000543886 HMGCLL1Q8TB92 370 aa16.86■□□□□ 0.29
PTPRO-209ENST00000543886 NAT14Q8WUY8 206 aa16.86■□□□□ 0.29
PTPRO-209ENST00000543886 VOPP1Q96AW1 172 aa16.86■□□□□ 0.29
PTPRO-209ENST00000543886 TUBGCP3Q96CW5 907 aa16.86■□□□□ 0.29
PTPRO-209ENST00000543886 MCCC1Q96RQ3 725 aaPredicted RBP16.86■□□□□ 0.29
PTPRO-209ENST00000543886 NUSAP1Q9BXS6 441 aaKnown RBP16.86■□□□□ 0.29
PTPRO-209ENST00000543886 FBRSL1Q9HCM7 1045 aaKnown RBP16.86■□□□□ 0.29
PTPRO-209ENST00000543886 PPM1HQ9ULR3 514 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms