RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 SMIM24O75264 130 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 IPO13O94829 963 aaKnown RBP9.23□□□□□ -0.93
GNE-206ENST00000543356 TSPAN12O95859 305 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 CHRM3P20309 590 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 TPP2P29144 1249 aaPredicted RBP9.23□□□□□ -0.93
GNE-206ENST00000543356 TNFRSF4P43489 277 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 IL2P60568 153 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 ELP6Q0PNE2 266 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 SETDB1Q15047 1291 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 GALNTL6Q49A17 601 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 EGFLAMQ63HQ2 1017 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 RFLNAQ6ZTI6 216 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 TECPR1Q7Z6L1 1165 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 SPNS2Q8IVW8 549 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 FITM2Q8N6M3 262 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 CSGALNACT1Q8TDX6 532 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 INPP5DQ92835 1189 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 L3HYPDHQ96EM0 354 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 SGF29Q96ES7 293 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 PDLIM5Q96HC4 596 aaKnown RBP9.23□□□□□ -0.93
GNE-206ENST00000543356 ATOH8Q96SQ7 321 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 COPS8Q99627 209 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 SLC30A3Q99726 388 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 WWP1Q9H0M0 922 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 FAM83DQ9H4H8 585 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 NCKIPSDQ9NZQ3 722 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 KLHL42Q9P2K6 505 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 TMCO1Q9UM00 188 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 RAP2CQ9Y3L5 183 aa9.23□□□□□ -0.93
GNE-206ENST00000543356 TPBGLP0DKB5 382 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 NAGLUP54802 743 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 OR4D1Q15615 310 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 CRY1Q16526 586 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 HENMT1Q5T8I9 393 aaKnown RBP9.22□□□□□ -0.93
GNE-206ENST00000543356 LIPIQ6XZB0 460 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 TRIM67Q6ZTA4 783 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 STAG3L4Q8TBR4 150 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 SKA1Q96BD8 255 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 FAM136AQ96C01 138 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 LINGO1Q96FE5 620 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 CNDP1Q96KN2 507 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 TMEM237Q96Q45 408 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 LRRC37BQ96QE4 947 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 ZSCAN5AQ9BUG6 496 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 HDAC8Q9BY41 377 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 YIPF3Q9GZM5 350 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 ACTR5Q9H9F9 607 aaPredicted RBP9.22□□□□□ -0.93
GNE-206ENST00000543356 PRSS16Q9NQE7 514 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 LATS2Q9NRM7 1088 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 DNAJC28Q9NX36 388 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 MARCOQ9UEW3 520 aaPredicted RBP9.22□□□□□ -0.93
GNE-206ENST00000543356 PRSS21Q9Y6M0 314 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 CDH23Q9H251 3354 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 A0A1B0GVG6 124 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 SYCE1LA8MT33 242 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 AREL1O15033 823 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 ELFN1P0C7U0 828 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 KITP10721 976 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 KCNA5P22460 613 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 ETV3P41162 512 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 AQP5P55064 265 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 PRKAA1Q13131 559 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 POM121L1PQ3SYA9 428 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 CYP2U1Q7Z449 544 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 CPNE9Q8IYJ1 553 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 ZNF781Q8N8C0 355 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 STON2Q8WXE9 905 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 COQ10AQ96MF6 247 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 VPS35Q96QK1 796 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 P2RY13Q9BPV8 354 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 SPATA16Q9BXB7 569 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 ILKAPQ9H0C8 392 aaPredicted RBP9.22□□□□□ -0.93
GNE-206ENST00000543356 TRPV5Q9NQA5 729 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 PNPOQ9NVS9 261 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 TMPRSS11EQ9UL52 423 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 SLC12A4Q9UP95 1085 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 STON1Q9Y6Q2 735 aa9.22□□□□□ -0.93
GNE-206ENST00000543356 NEMP2A6NFY4 417 aa9.21□□□□□ -0.93
GNE-206ENST00000543356 IQCF5A8MTL0 148 aa9.21□□□□□ -0.93
GNE-206ENST00000543356 ZNF195O14628 629 aa9.21□□□□□ -0.93
GNE-206ENST00000543356 UBOX5O94941 541 aa9.21□□□□□ -0.93
GNE-206ENST00000543356 EPHX1P07099 455 aa9.21□□□□□ -0.93
GNE-206ENST00000543356 ADRB3P13945 408 aa9.21□□□□□ -0.93
GNE-206ENST00000543356 EZRP15311 586 aaKnown RBP9.21□□□□□ -0.93
GNE-206ENST00000543356 GM2AP17900 193 aa9.21□□□□□ -0.93
GNE-206ENST00000543356 IMPDH1P20839 514 aa9.21□□□□□ -0.93
GNE-206ENST00000543356 KCNC1P48547 511 aa9.21□□□□□ -0.93
GNE-206ENST00000543356 METAP1P53582 386 aa9.21□□□□□ -0.93
GNE-206ENST00000543356 B4GALNT1Q00973 533 aa9.21□□□□□ -0.93
GNE-206ENST00000543356 GALNT1Q10472 559 aaPredicted RBP9.21□□□□□ -0.93
GNE-206ENST00000543356 SNCBQ16143 134 aa9.21□□□□□ -0.93
GNE-206ENST00000543356 HSF5Q4G112 596 aaPredicted RBP9.21□□□□□ -0.93
GNE-206ENST00000543356 TMEM52BQ4KMG9 183 aa9.21□□□□□ -0.93
GNE-206ENST00000543356 ARL13AQ5H913 290 aaPredicted RBP9.21□□□□□ -0.93
GNE-206ENST00000543356 GPRC6AQ5T6X5 926 aa9.21□□□□□ -0.93
GNE-206ENST00000543356 FAM46CQ5VWP2 391 aa9.21□□□□□ -0.93
GNE-206ENST00000543356 CWF19L1Q69YN2 538 aaKnown RBP9.21□□□□□ -0.93
GNE-206ENST00000543356 CAPRIN2Q6IMN6 1127 aaKnown RBP9.21□□□□□ -0.93
GNE-206ENST00000543356 FBXL19Q6PCT2 694 aa9.21□□□□□ -0.93
GNE-206ENST00000543356 Q6ZVL8 140 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms