RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 FCRL3Q96P31 734 aaPredicted RBP16.9■□□□□ 0.3
RABGGTA-203ENST00000543002 EBNA1BP2Q99848 306 aaKnown RBP16.9■□□□□ 0.3
RABGGTA-203ENST00000543002 TRIM56Q9BRZ2 755 aaKnown RBP16.9■□□□□ 0.3
RABGGTA-203ENST00000543002 NAT9Q9BTE0 207 aa16.9■□□□□ 0.3
RABGGTA-203ENST00000543002 GSDMCQ9BYG8 508 aa16.9■□□□□ 0.3
RABGGTA-203ENST00000543002 DLL3Q9NYJ7 618 aa16.9■□□□□ 0.3
RABGGTA-203ENST00000543002 NLGN3Q9NZ94 848 aa16.9■□□□□ 0.3
RABGGTA-203ENST00000543002 PCOLCE2Q9UKZ9 415 aa16.9■□□□□ 0.3
RABGGTA-203ENST00000543002 RPS6KL1Q9Y6S9 549 aa16.9■□□□□ 0.3
RABGGTA-203ENST00000543002 CFAP54Q96N23 3096 aa16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 ZCWPW2A0A1B0GU75 182 aa16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 BHMG1C9JSJ3 638 aaPredicted RBP16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 CFAP99D6REC4 459 aa16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 E7ESA3 106 aa16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 TRIM38O00635 465 aa16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 KMOO15229 486 aa16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 YY2O15391 372 aa16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 FFAR2O15552 330 aa16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 CBFA2T3O75081 653 aa16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 BANF1O75531 89 aa16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 POLBP06746 335 aa16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 RALBP11234 206 aa16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 PGAM1P18669 254 aa16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 CSRP1P21291 193 aaKnown RBP16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 ARCN1P48444 511 aaKnown RBP16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 B4GALNT1Q00973 533 aa16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 CTBSQ01459 385 aa16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 GUCY2DQ02846 1103 aa16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 LRP8Q14114 963 aa16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 ITIH4Q14624 930 aa16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 TCEA2Q15560 299 aa16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 TRADDQ15628 312 aa16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 DBN1Q16643 649 aa16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 FASTKD1Q53R41 847 aaKnown RBP16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 LYPLAL1Q5VWZ2 237 aa16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 CERS6Q6ZMG9 384 aa16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 TAF8Q7Z7C8 310 aa16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 LRRTM4Q86VH4 590 aa16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 NRROSQ86YC3 692 aa16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 CCNJLQ8IV13 435 aa16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 ZNF547Q8IVP9 402 aa16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 ZNF514Q96K75 400 aaPredicted RBP16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 CAMK1GQ96NX5 476 aa16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 TTC1Q99614 292 aa16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 DUSP23Q9BVJ7 150 aa16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 CATSPERZQ9NTU4 200 aa16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 DMGDHQ9UI17 866 aaKnown RBP16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 GPR34Q9UPC5 381 aa16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 DOLKQ9UPQ8 538 aa16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 PRKAB1Q9Y478 270 aa16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 TEX264Q9Y6I9 313 aa16.89■□□□□ 0.29
RABGGTA-203ENST00000543002 ARID1BQ8NFD5 2236 aaPredicted RBP16.88■□□□□ 0.29
RABGGTA-203ENST00000543002 CD3EAPO15446 510 aaKnown RBP16.88■□□□□ 0.29
RABGGTA-203ENST00000543002 TTC4O95801 387 aa16.88■□□□□ 0.29
RABGGTA-203ENST00000543002 ELK3P41970 407 aa16.88■□□□□ 0.29
RABGGTA-203ENST00000543002 CTSCP53634 463 aa16.88■□□□□ 0.29
RABGGTA-203ENST00000543002 PLTPP55058 493 aa16.88■□□□□ 0.29
RABGGTA-203ENST00000543002 DEFB133Q30KQ1 61 aa16.88■□□□□ 0.29
RABGGTA-203ENST00000543002 AARS2Q5JTZ9 985 aaKnown RBP16.88■□□□□ 0.29
RABGGTA-203ENST00000543002 CRTC3Q6UUV7 619 aa16.88■□□□□ 0.29
RABGGTA-203ENST00000543002 ZDHHC24Q6UX98 284 aa16.88■□□□□ 0.29
RABGGTA-203ENST00000543002 CHST15Q7LFX5 561 aaPredicted RBP16.88■□□□□ 0.29
RABGGTA-203ENST00000543002 TRAPPC5Q8IUR0 188 aa16.88■□□□□ 0.29
RABGGTA-203ENST00000543002 IGDCC3Q8IVU1 814 aa16.88■□□□□ 0.29
RABGGTA-203ENST00000543002 BAHD1Q8TBE0 780 aaPredicted RBP16.88■□□□□ 0.29
RABGGTA-203ENST00000543002 FBXO25Q8TCJ0 367 aa16.88■□□□□ 0.29
RABGGTA-203ENST00000543002 SCG3Q8WXD2 468 aaKnown RBP16.88■□□□□ 0.29
RABGGTA-203ENST00000543002 CCDC97Q96F63 343 aaPredicted RBP16.88■□□□□ 0.29
RABGGTA-203ENST00000543002 BOCQ9BWV1 1114 aa16.88■□□□□ 0.29
RABGGTA-203ENST00000543002 SLC32A1Q9H598 525 aa16.88■□□□□ 0.29
RABGGTA-203ENST00000543002 MARCH4Q9P2E8 410 aaPredicted RBP16.88■□□□□ 0.29
RABGGTA-203ENST00000543002 PLEKHM1Q9Y4G2 1056 aa16.88■□□□□ 0.29
RABGGTA-203ENST00000543002 ST14Q9Y5Y6 855 aa16.88■□□□□ 0.29
RABGGTA-203ENST00000543002 FAM169AQ9Y6X4 670 aa16.88■□□□□ 0.29
RABGGTA-203ENST00000543002 ESYT3A0FGR9 886 aa16.87■□□□□ 0.29
RABGGTA-203ENST00000543002 EIF3HO15372 352 aaKnown RBP eCLIP16.87■□□□□ 0.29
RABGGTA-203ENST00000543002 SIGLEC6O43699 453 aa16.87■□□□□ 0.29
RABGGTA-203ENST00000543002 ACP5P13686 325 aa16.87■□□□□ 0.29
RABGGTA-203ENST00000543002 ATP1B2P14415 290 aaPredicted RBP16.87■□□□□ 0.29
RABGGTA-203ENST00000543002 ZNF7P17097 686 aaPredicted RBP16.87■□□□□ 0.29
RABGGTA-203ENST00000543002 AK4P27144 223 aaPredicted RBP16.87■□□□□ 0.29
RABGGTA-203ENST00000543002 PPARGP37231 505 aaPredicted RBP16.87■□□□□ 0.29
RABGGTA-203ENST00000543002 PDIA2Q13087 525 aaKnown RBP16.87■□□□□ 0.29
RABGGTA-203ENST00000543002 SEMA3AQ14563 771 aa16.87■□□□□ 0.29
RABGGTA-203ENST00000543002 SPANXN3Q5MJ09 141 aa16.87■□□□□ 0.29
RABGGTA-203ENST00000543002 ZCCHC8Q6NZY4 707 aaKnown RBP16.87■□□□□ 0.29
RABGGTA-203ENST00000543002 TMEM220Q6QAJ8 160 aa16.87■□□□□ 0.29
RABGGTA-203ENST00000543002 PACS1Q6VY07 963 aa16.87■□□□□ 0.29
RABGGTA-203ENST00000543002 CENPUQ71F23 418 aa16.87■□□□□ 0.29
RABGGTA-203ENST00000543002 DET1Q7L5Y6 550 aa16.87■□□□□ 0.29
RABGGTA-203ENST00000543002 C11orf96Q7Z7L8 435 aa16.87■□□□□ 0.29
RABGGTA-203ENST00000543002 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.87■□□□□ 0.29
RABGGTA-203ENST00000543002 DEFB124Q8NES8 71 aa16.87■□□□□ 0.29
RABGGTA-203ENST00000543002 SGF29Q96ES7 293 aa16.87■□□□□ 0.29
RABGGTA-203ENST00000543002 CDC6Q99741 560 aa16.87■□□□□ 0.29
RABGGTA-203ENST00000543002 WDR83Q9BRX9 315 aaKnown RBP16.87■□□□□ 0.29
RABGGTA-203ENST00000543002 TIMM29Q9BSF4 260 aa16.87■□□□□ 0.29
RABGGTA-203ENST00000543002 EPB41L5Q9HCM4 733 aa16.87■□□□□ 0.29
RABGGTA-203ENST00000543002 FAM114A2Q9NRY5 505 aa16.87■□□□□ 0.29
RABGGTA-203ENST00000543002 CHMP2BQ9UQN3 213 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms