RNA–Protein interactions for RNA: ENST00000542922.5

SLC3A2-220, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2

Gene SLC3A2, Length 2,174 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-220ENST00000542922 ERVPABLB-1P60509 514 aa13.54□□□□□ -0.24
SLC3A2-220ENST00000542922 CACNG1Q06432 222 aa13.54□□□□□ -0.24
SLC3A2-220ENST00000542922 ILF2Q12905 390 aaKnown RBP13.54□□□□□ -0.24
SLC3A2-220ENST00000542922 XKR7Q5GH72 579 aa13.54□□□□□ -0.24
SLC3A2-220ENST00000542922 ARMC12Q5T9G4 340 aa13.54□□□□□ -0.24
SLC3A2-220ENST00000542922 LETMD1Q6P1Q0 360 aa13.54□□□□□ -0.24
SLC3A2-220ENST00000542922 HACD2Q6Y1H2 254 aa13.54□□□□□ -0.24
SLC3A2-220ENST00000542922 ZNF783Q6ZMS7 281 aa13.54□□□□□ -0.24
SLC3A2-220ENST00000542922 ARPINQ7Z6K5 226 aa13.54□□□□□ -0.24
SLC3A2-220ENST00000542922 DCAF4L2Q8NA75 395 aa13.54□□□□□ -0.24
SLC3A2-220ENST00000542922 DIS3LQ8TF46 1054 aaKnown RBP13.54□□□□□ -0.24
SLC3A2-220ENST00000542922 DDI1Q8WTU0 396 aa13.54□□□□□ -0.24
SLC3A2-220ENST00000542922 BTBD9Q96Q07 612 aa13.54□□□□□ -0.24
SLC3A2-220ENST00000542922 C1QTNF3Q9BXJ4 246 aa13.54□□□□□ -0.24
SLC3A2-220ENST00000542922 PDP2Q9P2J9 529 aa13.54□□□□□ -0.24
SLC3A2-220ENST00000542922 HSFX1Q9UBD0 423 aa13.54□□□□□ -0.24
SLC3A2-220ENST00000542922 PRRC2BQ5JSZ5 2229 aaKnown RBP13.53□□□□□ -0.24
SLC3A2-220ENST00000542922 ENO4A6NNW6 628 aa13.53□□□□□ -0.24
SLC3A2-220ENST00000542922 OLFM2O95897 454 aa13.53□□□□□ -0.24
SLC3A2-220ENST00000542922 ESR1P03372 595 aa13.53□□□□□ -0.24
SLC3A2-220ENST00000542922 GABRR2P28476 465 aa13.53□□□□□ -0.24
SLC3A2-220ENST00000542922 CD70P32970 193 aa13.53□□□□□ -0.24
SLC3A2-220ENST00000542922 CA8P35219 290 aa13.53□□□□□ -0.24
SLC3A2-220ENST00000542922 SOX11P35716 441 aa13.53□□□□□ -0.24
SLC3A2-220ENST00000542922 HMGCLP35914 325 aa13.53□□□□□ -0.24
SLC3A2-220ENST00000542922 PTGER3P43115 390 aa13.53□□□□□ -0.24
SLC3A2-220ENST00000542922 CLCN4P51793 760 aa13.53□□□□□ -0.24
SLC3A2-220ENST00000542922 UFM1P61960 85 aa13.53□□□□□ -0.24
SLC3A2-220ENST00000542922 RHDQ02161 417 aa13.53□□□□□ -0.24
SLC3A2-220ENST00000542922 SAMD4BQ5PRF9 694 aaKnown RBP13.53□□□□□ -0.24
SLC3A2-220ENST00000542922 HMBOX1Q6NT76 420 aa13.53□□□□□ -0.24
SLC3A2-220ENST00000542922 GPRIN3Q6ZVF9 776 aa13.53□□□□□ -0.24
SLC3A2-220ENST00000542922 AMIGO2Q86SJ2 522 aa13.53□□□□□ -0.24
SLC3A2-220ENST00000542922 SERPINA9Q86WD7 417 aa13.53□□□□□ -0.24
SLC3A2-220ENST00000542922 ZNF689Q96CS4 500 aaPredicted RBP13.53□□□□□ -0.24
SLC3A2-220ENST00000542922 RPL10LQ96L21 214 aaKnown RBP13.53□□□□□ -0.24
SLC3A2-220ENST00000542922 C17orf80Q9BSJ5 609 aa13.53□□□□□ -0.24
SLC3A2-220ENST00000542922 CMTM6Q9NX76 183 aa13.53□□□□□ -0.24
SLC3A2-220ENST00000542922 EPS15L1Q9UBC2 864 aa13.53□□□□□ -0.24
SLC3A2-220ENST00000542922 EGFL7Q9UHF1 273 aa13.53□□□□□ -0.24
SLC3A2-220ENST00000542922 BCAP29Q9UHQ4 241 aa13.53□□□□□ -0.24
SLC3A2-220ENST00000542922 OGDHLQ9ULD0 1010 aa13.53□□□□□ -0.24
SLC3A2-220ENST00000542922 CNOT6Q9ULM6 557 aaKnown RBP13.53□□□□□ -0.24
SLC3A2-220ENST00000542922 VPS9D1Q9Y2B5 631 aa13.53□□□□□ -0.24
SLC3A2-220ENST00000542922 AP4S1Q9Y587 144 aa13.53□□□□□ -0.24
SLC3A2-220ENST00000542922 AP4B1Q9Y6B7 739 aa13.53□□□□□ -0.24
SLC3A2-220ENST00000542922 SLC30A1Q9Y6M5 507 aa13.53□□□□□ -0.24
SLC3A2-220ENST00000542922 ZNF106Q9H2Y7 1883 aaKnown RBP13.53□□□□□ -0.24
SLC3A2-220ENST00000542922 LTBP2Q14767 1821 aa13.53□□□□□ -0.24
SLC3A2-220ENST00000542922 C1orf232A0A0U1RR37 186 aa13.52□□□□□ -0.24
SLC3A2-220ENST00000542922 TCRBV3S1A0A5B6 114 aa13.52□□□□□ -0.24
SLC3A2-220ENST00000542922 ZNF821O75541 412 aaPredicted RBP13.52□□□□□ -0.24
SLC3A2-220ENST00000542922 CLDN7O95471 211 aa13.52□□□□□ -0.24
SLC3A2-220ENST00000542922 CAPNS1P04632 268 aa13.52□□□□□ -0.24
SLC3A2-220ENST00000542922 CYBBP04839 570 aa13.52□□□□□ -0.24
SLC3A2-220ENST00000542922 CTSOP43234 321 aaPredicted RBP13.52□□□□□ -0.24
SLC3A2-220ENST00000542922 STK19P49842 368 aaPredicted RBP13.52□□□□□ -0.24
SLC3A2-220ENST00000542922 LMAN2Q12907 356 aa13.52□□□□□ -0.24
SLC3A2-220ENST00000542922 GRM2Q14416 872 aa13.52□□□□□ -0.24
SLC3A2-220ENST00000542922 NRF1Q16656 503 aa13.52□□□□□ -0.24
SLC3A2-220ENST00000542922 MTX3Q5HYI7 312 aa13.52□□□□□ -0.24
SLC3A2-220ENST00000542922 CNKSR3Q6P9H4 555 aa13.52□□□□□ -0.24
SLC3A2-220ENST00000542922 SBSNQ6UWP8 590 aa13.52□□□□□ -0.24
SLC3A2-220ENST00000542922 TSPAN33Q86UF1 283 aa13.52□□□□□ -0.24
SLC3A2-220ENST00000542922 SLC15A3Q8IY34 581 aa13.52□□□□□ -0.24
SLC3A2-220ENST00000542922 TCEAL8Q8IYN2 117 aa13.52□□□□□ -0.24
SLC3A2-220ENST00000542922 TOP1MTQ969P6 601 aa13.52□□□□□ -0.24
SLC3A2-220ENST00000542922 VOPP1Q96AW1 172 aa13.52□□□□□ -0.24
SLC3A2-220ENST00000542922 CNBD2Q96M20 576 aa13.52□□□□□ -0.24
SLC3A2-220ENST00000542922 SEZ6LQ9BYH1 1024 aa13.52□□□□□ -0.24
SLC3A2-220ENST00000542922 CIPCQ9C0C6 399 aa13.52□□□□□ -0.24
SLC3A2-220ENST00000542922 RC3H2Q9HBD1 1191 aaKnown RBP13.52□□□□□ -0.24
SLC3A2-220ENST00000542922 MAGEE1Q9HCI5 957 aa13.52□□□□□ -0.24
SLC3A2-220ENST00000542922 MRGBPQ9NV56 204 aa13.52□□□□□ -0.24
SLC3A2-220ENST00000542922 AIG1Q9NVV5 245 aa13.52□□□□□ -0.24
SLC3A2-220ENST00000542922 HACD3Q9P035 362 aa13.52□□□□□ -0.24
SLC3A2-220ENST00000542922 CFAP97Q9P2B7 532 aa13.52□□□□□ -0.24
SLC3A2-220ENST00000542922 INTS6Q9UL03 887 aaKnown RBP13.52□□□□□ -0.24
SLC3A2-220ENST00000542922 PRMT5O14744 637 aaPredicted RBP13.52□□□□□ -0.25
SLC3A2-220ENST00000542922 ANGPT2O15123 496 aa13.52□□□□□ -0.25
SLC3A2-220ENST00000542922 BAIAP3O94812 1187 aa13.52□□□□□ -0.25
SLC3A2-220ENST00000542922 CKMP06732 381 aa13.52□□□□□ -0.25
SLC3A2-220ENST00000542922 CCL5P13501 91 aa13.52□□□□□ -0.25
SLC3A2-220ENST00000542922 ITGB8P26012 769 aa13.52□□□□□ -0.25
SLC3A2-220ENST00000542922 IL12AP29459 219 aa13.52□□□□□ -0.25
SLC3A2-220ENST00000542922 HNF1BP35680 557 aa13.52□□□□□ -0.25
SLC3A2-220ENST00000542922 GRIA3P42263 894 aa13.52□□□□□ -0.25
SLC3A2-220ENST00000542922 CHN2P52757 468 aa13.52□□□□□ -0.25
SLC3A2-220ENST00000542922 RPS6KA2Q15349 733 aa13.52□□□□□ -0.25
SLC3A2-220ENST00000542922 AAK1Q2M2I8 961 aa13.52□□□□□ -0.25
SLC3A2-220ENST00000542922 AARS2Q5JTZ9 985 aaKnown RBP13.52□□□□□ -0.25
SLC3A2-220ENST00000542922 PAGE3Q5JUK9 113 aa13.52□□□□□ -0.25
SLC3A2-220ENST00000542922 BLOC1S3Q6QNY0 202 aa13.52□□□□□ -0.25
SLC3A2-220ENST00000542922 ADCY4Q8NFM4 1077 aa13.52□□□□□ -0.25
SLC3A2-220ENST00000542922 ROPN1LQ96C74 230 aa13.52□□□□□ -0.25
SLC3A2-220ENST00000542922 ABCG8Q9H221 673 aa13.52□□□□□ -0.25
SLC3A2-220ENST00000542922 NOL11Q9H8H0 719 aaKnown RBP13.52□□□□□ -0.25
SLC3A2-220ENST00000542922 IL26Q9NPH9 171 aa13.52□□□□□ -0.25
SLC3A2-220ENST00000542922 ELOVL2Q9NXB9 296 aa13.52□□□□□ -0.25
SLC3A2-220ENST00000542922 SLAMF8Q9P0V8 285 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms